Analysis of genetic diversity and differentiation of artificial populations of yellowhorn (Xanthoceras sorbifolium) in China using ISSR markers
Yellowhorn ( Xanthoceras sorbifolium Bunge) is a drought-tolerant tree in the family Sapindaceae that is native to northeastern China. Its remarkably oil-rich seeds are a reliable biodiesel source. An inter simple sequence repeat (ISSR) analysis showed genetic variation among four artificial populat...
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| Veröffentlicht in: | Journal of forestry research 2016-10, Vol.27 (5), p.1099-1104 |
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| creator | An, Chanhoon Lee, Hyunseok Lee, Jeonghoon Cheong, Eun Ju Li, Yuhua Yi, Jae-Seon |
| description | Yellowhorn (
Xanthoceras sorbifolium
Bunge) is a drought-tolerant tree in the family Sapindaceae that is native to northeastern China. Its remarkably oil-rich seeds are a reliable biodiesel source. An inter simple sequence repeat (ISSR) analysis showed genetic variation among four artificial populations in China: two in Inner Mongolia (IM), one in Liaoning (LN), and one in Shandong (SD). The average percentage of polymorphic loci was 81.25 % for these four populations. The Forest Farm in SD showed the highest number of effective alleles (N
e
), Shannon index (I), and expected heterozygosity (H
e
), i.e., 1.598, 0.470, and 0.325, respectively, but the lowest number of alleles (N
a
) as 1.600. Based on an analysis of molecular variance, 23 % of the total genetic variation was found among populations, and 77 % within populations. A principal coordinate analysis revealed two groups (Group 1: Lindonglinchang, Jianping Agriculture Research Station and Forest Farm; Group 2: Jinjilinchang). Understanding the genetic diversity among artificial yellowhorn populations in China, detected using ISSRs, will be useful for yellowhorn conservation and improvement. Additional artificial and natural populations need to be included in the future for a country-wide perspective. |
| doi_str_mv | 10.1007/s11676-016-0225-2 |
| format | Article |
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Xanthoceras sorbifolium
Bunge) is a drought-tolerant tree in the family Sapindaceae that is native to northeastern China. Its remarkably oil-rich seeds are a reliable biodiesel source. An inter simple sequence repeat (ISSR) analysis showed genetic variation among four artificial populations in China: two in Inner Mongolia (IM), one in Liaoning (LN), and one in Shandong (SD). The average percentage of polymorphic loci was 81.25 % for these four populations. The Forest Farm in SD showed the highest number of effective alleles (N
e
), Shannon index (I), and expected heterozygosity (H
e
), i.e., 1.598, 0.470, and 0.325, respectively, but the lowest number of alleles (N
a
) as 1.600. Based on an analysis of molecular variance, 23 % of the total genetic variation was found among populations, and 77 % within populations. A principal coordinate analysis revealed two groups (Group 1: Lindonglinchang, Jianping Agriculture Research Station and Forest Farm; Group 2: Jinjilinchang). Understanding the genetic diversity among artificial yellowhorn populations in China, detected using ISSRs, will be useful for yellowhorn conservation and improvement. Additional artificial and natural populations need to be included in the future for a country-wide perspective.</description><identifier>ISSN: 1007-662X</identifier><identifier>EISSN: 1993-0607</identifier><identifier>DOI: 10.1007/s11676-016-0225-2</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Analysis ; Biological diversity ; Biomedical and Life Sciences ; Forestry ; Genetic research ; Life Sciences ; Original Paper</subject><ispartof>Journal of forestry research, 2016-10, Vol.27 (5), p.1099-1104</ispartof><rights>Northeast Forestry University and Springer-Verlag Berlin Heidelberg 2016</rights><rights>COPYRIGHT 2016 Springer</rights><rights>Copyright © Wanfang Data Co. Ltd. All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c385t-ceaedb2b08f03ad8a7844c524f49a5bd7e76130d5ebc46620f8f15cc838eeced3</citedby><cites>FETCH-LOGICAL-c385t-ceaedb2b08f03ad8a7844c524f49a5bd7e76130d5ebc46620f8f15cc838eeced3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.wanfangdata.com.cn/images/PeriodicalImages/lyyj/lyyj.jpg</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11676-016-0225-2$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11676-016-0225-2$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>An, Chanhoon</creatorcontrib><creatorcontrib>Lee, Hyunseok</creatorcontrib><creatorcontrib>Lee, Jeonghoon</creatorcontrib><creatorcontrib>Cheong, Eun Ju</creatorcontrib><creatorcontrib>Li, Yuhua</creatorcontrib><creatorcontrib>Yi, Jae-Seon</creatorcontrib><title>Analysis of genetic diversity and differentiation of artificial populations of yellowhorn (Xanthoceras sorbifolium) in China using ISSR markers</title><title>Journal of forestry research</title><addtitle>J. For. Res</addtitle><description>Yellowhorn (
Xanthoceras sorbifolium
Bunge) is a drought-tolerant tree in the family Sapindaceae that is native to northeastern China. Its remarkably oil-rich seeds are a reliable biodiesel source. An inter simple sequence repeat (ISSR) analysis showed genetic variation among four artificial populations in China: two in Inner Mongolia (IM), one in Liaoning (LN), and one in Shandong (SD). The average percentage of polymorphic loci was 81.25 % for these four populations. The Forest Farm in SD showed the highest number of effective alleles (N
e
), Shannon index (I), and expected heterozygosity (H
e
), i.e., 1.598, 0.470, and 0.325, respectively, but the lowest number of alleles (N
a
) as 1.600. Based on an analysis of molecular variance, 23 % of the total genetic variation was found among populations, and 77 % within populations. A principal coordinate analysis revealed two groups (Group 1: Lindonglinchang, Jianping Agriculture Research Station and Forest Farm; Group 2: Jinjilinchang). Understanding the genetic diversity among artificial yellowhorn populations in China, detected using ISSRs, will be useful for yellowhorn conservation and improvement. Additional artificial and natural populations need to be included in the future for a country-wide perspective.</description><subject>Analysis</subject><subject>Biological diversity</subject><subject>Biomedical and Life Sciences</subject><subject>Forestry</subject><subject>Genetic research</subject><subject>Life Sciences</subject><subject>Original Paper</subject><issn>1007-662X</issn><issn>1993-0607</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNp1kV1rFDEUhgdRsLb-AO8CItiLafMxX3u5LFYLBcEq9C6cyZzMnjWbLMmsZX6Ff9lsRxBBCSEnyfOenLynKN4IfiU4b6-TEE3blFzkKWVdymfFmVitVMkb3j7PcYbKppEPL4tXKe04ryulqrPi59qDmxMlFiwb0eNEhg30A2OiaWbgh7yzFiP6iWCi4E8gxIksGQLHDuFwdE8XTylmdC48bkP07P0D-GkbDEZILIXYkw2OjvtLRp5ttuSBHRP5kd3e339he4jf86MXxQsLLuHr3-t58e3mw9fNp_Lu88fbzfquNKqrp9Ig4NDLnneWKxg6aLuqMrWsbLWCuh9abBuh-FBjb6r8bW47K2pjOtUhGhzUefFuyfsI3oIf9S4cY7YiaTfPO5l95DUXKnNvF24Eh5q8DVMEs6dk9LoVbZdtrepMXf2DymPAPZng0VI-_0sgFoGJIaWIVh8iZQtmLbg-9UovDdW5EH1qqJZZIxdNyqwfMf6p-f-iX1Gtpbg</recordid><startdate>20161001</startdate><enddate>20161001</enddate><creator>An, Chanhoon</creator><creator>Lee, Hyunseok</creator><creator>Lee, Jeonghoon</creator><creator>Cheong, Eun Ju</creator><creator>Li, Yuhua</creator><creator>Yi, Jae-Seon</creator><general>Springer Berlin Heidelberg</general><general>Springer</general><general>Department of Forestry, Graduate School, Kangwon National University, Chuncheon 24341, Republic of Korea%Department of Forestry, Graduate School, Kangwon National University, Chuncheon 24341, Republic of Korea</general><general>Forest Genetic Resources Department, National Institute of Forest Science, Suwon 16631, Republic of Korea%Herbal Crop Research Division, National Institute of Horticultural & Herbal Science, Rural Development Administration, Eumseong 27709, Republic of Korea%Department of Forest Resources, College of Forest and Environmental Sciences, Kangwon National University,Chuncheon 24341, Republic of Korea%Department of Developmental Biology, College of Life Science, Northeast Forestry University, Harbin 150040,People's Republic of China%Department of Forest Resources, College of Forest and Environmental Sciences, Kangwon National University,Chuncheon 24341, Republic of Korea</general><general>Herbal Crop Research Division, National Institute of Horticultural & Herbal Science, Rural Development Administration, Eumseong 27709, Republic of Korea</general><general>Department of Developmental Biology, College of Life Science, Northeast Forestry University, Harbin 150040,People's Republic of China</general><scope>AAYXX</scope><scope>CITATION</scope><scope>2B.</scope><scope>4A8</scope><scope>92I</scope><scope>93N</scope><scope>PSX</scope><scope>TCJ</scope></search><sort><creationdate>20161001</creationdate><title>Analysis of genetic diversity and differentiation of artificial populations of yellowhorn (Xanthoceras sorbifolium) in China using ISSR markers</title><author>An, Chanhoon ; Lee, Hyunseok ; Lee, Jeonghoon ; Cheong, Eun Ju ; Li, Yuhua ; Yi, Jae-Seon</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c385t-ceaedb2b08f03ad8a7844c524f49a5bd7e76130d5ebc46620f8f15cc838eeced3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Analysis</topic><topic>Biological diversity</topic><topic>Biomedical and Life Sciences</topic><topic>Forestry</topic><topic>Genetic research</topic><topic>Life Sciences</topic><topic>Original Paper</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>An, Chanhoon</creatorcontrib><creatorcontrib>Lee, Hyunseok</creatorcontrib><creatorcontrib>Lee, Jeonghoon</creatorcontrib><creatorcontrib>Cheong, Eun Ju</creatorcontrib><creatorcontrib>Li, Yuhua</creatorcontrib><creatorcontrib>Yi, Jae-Seon</creatorcontrib><collection>CrossRef</collection><collection>Wanfang Data Journals - Hong Kong</collection><collection>WANFANG Data Centre</collection><collection>Wanfang Data Journals</collection><collection>万方数据期刊 - 香港版</collection><collection>China Online Journals (COJ)</collection><collection>China Online Journals (COJ)</collection><jtitle>Journal of forestry research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>An, Chanhoon</au><au>Lee, Hyunseok</au><au>Lee, Jeonghoon</au><au>Cheong, Eun Ju</au><au>Li, Yuhua</au><au>Yi, Jae-Seon</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Analysis of genetic diversity and differentiation of artificial populations of yellowhorn (Xanthoceras sorbifolium) in China using ISSR markers</atitle><jtitle>Journal of forestry research</jtitle><stitle>J. For. Res</stitle><date>2016-10-01</date><risdate>2016</risdate><volume>27</volume><issue>5</issue><spage>1099</spage><epage>1104</epage><pages>1099-1104</pages><issn>1007-662X</issn><eissn>1993-0607</eissn><abstract>Yellowhorn (
Xanthoceras sorbifolium
Bunge) is a drought-tolerant tree in the family Sapindaceae that is native to northeastern China. Its remarkably oil-rich seeds are a reliable biodiesel source. An inter simple sequence repeat (ISSR) analysis showed genetic variation among four artificial populations in China: two in Inner Mongolia (IM), one in Liaoning (LN), and one in Shandong (SD). The average percentage of polymorphic loci was 81.25 % for these four populations. The Forest Farm in SD showed the highest number of effective alleles (N
e
), Shannon index (I), and expected heterozygosity (H
e
), i.e., 1.598, 0.470, and 0.325, respectively, but the lowest number of alleles (N
a
) as 1.600. Based on an analysis of molecular variance, 23 % of the total genetic variation was found among populations, and 77 % within populations. A principal coordinate analysis revealed two groups (Group 1: Lindonglinchang, Jianping Agriculture Research Station and Forest Farm; Group 2: Jinjilinchang). Understanding the genetic diversity among artificial yellowhorn populations in China, detected using ISSRs, will be useful for yellowhorn conservation and improvement. Additional artificial and natural populations need to be included in the future for a country-wide perspective.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s11676-016-0225-2</doi><tpages>6</tpages></addata></record> |
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| ispartof | Journal of forestry research, 2016-10, Vol.27 (5), p.1099-1104 |
| issn | 1007-662X 1993-0607 |
| language | eng |
| recordid | cdi_wanfang_journals_lyyj201605013 |
| source | Springer Nature - Complete Springer Journals; Alma/SFX Local Collection |
| subjects | Analysis Biological diversity Biomedical and Life Sciences Forestry Genetic research Life Sciences Original Paper |
| title | Analysis of genetic diversity and differentiation of artificial populations of yellowhorn (Xanthoceras sorbifolium) in China using ISSR markers |
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