Development of real-time PCR method for rapid detection and quantification of Heterosigma akashiwo
To rapidly detect the harmful algae H. akashiwo qualitatively and quantitatively, sequences of the 18S rDNA deduced from H. akashiwo were used for designing species-specific primers, and a RFQ-PCR (Realtime Fluorescent Quantitative Polymerase Chain Reaction) method was developed for quantitative det...
Gespeichert in:
Veröffentlicht in: | Journal of Harbin Institute of Technology 2008-02, Vol.15 (1), p.118-123 |
---|---|
1. Verfasser: | |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 123 |
---|---|
container_issue | 1 |
container_start_page | 118 |
container_title | Journal of Harbin Institute of Technology |
container_volume | 15 |
creator | 何闪英 于志刚 米铁柱 |
description | To rapidly detect the harmful algae H. akashiwo qualitatively and quantitatively, sequences of the 18S rDNA deduced from H. akashiwo were used for designing species-specific primers, and a RFQ-PCR (Realtime Fluorescent Quantitative Polymerase Chain Reaction) method was developed for quantitative detection of H. akashiwo. Primer H. akashiwo and TaqMan probe were designed, and the specificity of primer was checked with PCR. A calibration curve was constructed with cycle threshold value against visual counted cell number. And the value of the curve was tested with other H. akashiwo samples, which were assayed with both the RFQ- PCR method and visual count under microscope. |
format | Article |
fullrecord | <record><control><sourceid>wanfang_jour_chong</sourceid><recordid>TN_cdi_wanfang_journals_hebgydxxb_e200801024</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><cqvip_id>26811698</cqvip_id><wanfj_id>hebgydxxb_e200801024</wanfj_id><sourcerecordid>hebgydxxb_e200801024</sourcerecordid><originalsourceid>FETCH-LOGICAL-c1344-fc408ceb90a7f03ad9147376e0b03e0920c6e7200cad20b29e2f5885b97d6983</originalsourceid><addsrcrecordid>eNotjctOwzAURLMAifL4B4s1ka7tNImXqDyKVAmEuo-u7evEbWK3SUrL3xMoq5Fm5sxcJDMOME8V5_IquR6GDYBUCvJZop_oi9q46yiMLDrWE7bp6DtiH4tP1tHYRMtc7FmPO2-ZpZHM6GNgGCzbHzCM3nmDf9aEL6e8j4OvO2S4xaHxx3ibXDpsB7r715tk_fK8XizT1fvr2-JxlRousyx1JoPSkFaAhQOJVvGskEVOoEESKAEmp0IAGLQCtFAk3Lws51oVNlelvEkezrNHDA5DXW3ioQ_TYdWQrr_t6aQrmvASOIhsqt-f66aJod77CdBots63VIm85Px38wc47l8M</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Development of real-time PCR method for rapid detection and quantification of Heterosigma akashiwo</title><source>Alma/SFX Local Collection</source><creator>何闪英 于志刚 米铁柱</creator><creatorcontrib>何闪英 于志刚 米铁柱</creatorcontrib><description>To rapidly detect the harmful algae H. akashiwo qualitatively and quantitatively, sequences of the 18S rDNA deduced from H. akashiwo were used for designing species-specific primers, and a RFQ-PCR (Realtime Fluorescent Quantitative Polymerase Chain Reaction) method was developed for quantitative detection of H. akashiwo. Primer H. akashiwo and TaqMan probe were designed, and the specificity of primer was checked with PCR. A calibration curve was constructed with cycle threshold value against visual counted cell number. And the value of the curve was tested with other H. akashiwo samples, which were assayed with both the RFQ- PCR method and visual count under microscope.</description><identifier>ISSN: 1005-9113</identifier><language>eng</language><publisher>College of Environmental Science and Engineering, Zhejiang Gongshang University, Hangzhou 310012, China%College of Chemistry and Chemical Engineering, Ocean University of China, Qingdao 266003 ,China%College of Environmental Science and Engineering, Ocean University of China, Qingdao 266003, China</publisher><subject>分子探针 ; 时间相关分析 ; 硅藻门 ; 荧光定量PCR</subject><ispartof>Journal of Harbin Institute of Technology, 2008-02, Vol.15 (1), p.118-123</ispartof><rights>Copyright © Wanfang Data Co. Ltd. All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://image.cqvip.com/vip1000/qk/86045X/86045X.jpg</thumbnail><link.rule.ids>314,777,781</link.rule.ids></links><search><creatorcontrib>何闪英 于志刚 米铁柱</creatorcontrib><title>Development of real-time PCR method for rapid detection and quantification of Heterosigma akashiwo</title><title>Journal of Harbin Institute of Technology</title><addtitle>Journal of Harbin Institute of Technology</addtitle><description>To rapidly detect the harmful algae H. akashiwo qualitatively and quantitatively, sequences of the 18S rDNA deduced from H. akashiwo were used for designing species-specific primers, and a RFQ-PCR (Realtime Fluorescent Quantitative Polymerase Chain Reaction) method was developed for quantitative detection of H. akashiwo. Primer H. akashiwo and TaqMan probe were designed, and the specificity of primer was checked with PCR. A calibration curve was constructed with cycle threshold value against visual counted cell number. And the value of the curve was tested with other H. akashiwo samples, which were assayed with both the RFQ- PCR method and visual count under microscope.</description><subject>分子探针</subject><subject>时间相关分析</subject><subject>硅藻门</subject><subject>荧光定量PCR</subject><issn>1005-9113</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><recordid>eNotjctOwzAURLMAifL4B4s1ka7tNImXqDyKVAmEuo-u7evEbWK3SUrL3xMoq5Fm5sxcJDMOME8V5_IquR6GDYBUCvJZop_oi9q46yiMLDrWE7bp6DtiH4tP1tHYRMtc7FmPO2-ZpZHM6GNgGCzbHzCM3nmDf9aEL6e8j4OvO2S4xaHxx3ibXDpsB7r715tk_fK8XizT1fvr2-JxlRousyx1JoPSkFaAhQOJVvGskEVOoEESKAEmp0IAGLQCtFAk3Lws51oVNlelvEkezrNHDA5DXW3ioQ_TYdWQrr_t6aQrmvASOIhsqt-f66aJod77CdBots63VIm85Px38wc47l8M</recordid><startdate>200802</startdate><enddate>200802</enddate><creator>何闪英 于志刚 米铁柱</creator><general>College of Environmental Science and Engineering, Zhejiang Gongshang University, Hangzhou 310012, China%College of Chemistry and Chemical Engineering, Ocean University of China, Qingdao 266003 ,China%College of Environmental Science and Engineering, Ocean University of China, Qingdao 266003, China</general><scope>2RA</scope><scope>92L</scope><scope>CQIGP</scope><scope>W94</scope><scope>WU4</scope><scope>~WA</scope><scope>2B.</scope><scope>4A8</scope><scope>92I</scope><scope>93N</scope><scope>PSX</scope><scope>TCJ</scope></search><sort><creationdate>200802</creationdate><title>Development of real-time PCR method for rapid detection and quantification of Heterosigma akashiwo</title><author>何闪英 于志刚 米铁柱</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c1344-fc408ceb90a7f03ad9147376e0b03e0920c6e7200cad20b29e2f5885b97d6983</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>分子探针</topic><topic>时间相关分析</topic><topic>硅藻门</topic><topic>荧光定量PCR</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>何闪英 于志刚 米铁柱</creatorcontrib><collection>中文科技期刊数据库</collection><collection>中文科技期刊数据库-CALIS站点</collection><collection>中文科技期刊数据库-7.0平台</collection><collection>中文科技期刊数据库-自然科学</collection><collection>中文科技期刊数据库-自然科学-生物科学</collection><collection>中文科技期刊数据库- 镜像站点</collection><collection>Wanfang Data Journals - Hong Kong</collection><collection>WANFANG Data Centre</collection><collection>Wanfang Data Journals</collection><collection>万方数据期刊 - 香港版</collection><collection>China Online Journals (COJ)</collection><collection>China Online Journals (COJ)</collection><jtitle>Journal of Harbin Institute of Technology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>何闪英 于志刚 米铁柱</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Development of real-time PCR method for rapid detection and quantification of Heterosigma akashiwo</atitle><jtitle>Journal of Harbin Institute of Technology</jtitle><addtitle>Journal of Harbin Institute of Technology</addtitle><date>2008-02</date><risdate>2008</risdate><volume>15</volume><issue>1</issue><spage>118</spage><epage>123</epage><pages>118-123</pages><issn>1005-9113</issn><abstract>To rapidly detect the harmful algae H. akashiwo qualitatively and quantitatively, sequences of the 18S rDNA deduced from H. akashiwo were used for designing species-specific primers, and a RFQ-PCR (Realtime Fluorescent Quantitative Polymerase Chain Reaction) method was developed for quantitative detection of H. akashiwo. Primer H. akashiwo and TaqMan probe were designed, and the specificity of primer was checked with PCR. A calibration curve was constructed with cycle threshold value against visual counted cell number. And the value of the curve was tested with other H. akashiwo samples, which were assayed with both the RFQ- PCR method and visual count under microscope.</abstract><pub>College of Environmental Science and Engineering, Zhejiang Gongshang University, Hangzhou 310012, China%College of Chemistry and Chemical Engineering, Ocean University of China, Qingdao 266003 ,China%College of Environmental Science and Engineering, Ocean University of China, Qingdao 266003, China</pub><tpages>6</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1005-9113 |
ispartof | Journal of Harbin Institute of Technology, 2008-02, Vol.15 (1), p.118-123 |
issn | 1005-9113 |
language | eng |
recordid | cdi_wanfang_journals_hebgydxxb_e200801024 |
source | Alma/SFX Local Collection |
subjects | 分子探针 时间相关分析 硅藻门 荧光定量PCR |
title | Development of real-time PCR method for rapid detection and quantification of Heterosigma akashiwo |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-19T22%3A16%3A43IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-wanfang_jour_chong&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Development%20of%20real-time%20PCR%20method%20for%20rapid%20detection%20and%20quantification%20of%20Heterosigma%20akashiwo&rft.jtitle=Journal%20of%20Harbin%20Institute%20of%20Technology&rft.au=%E4%BD%95%E9%97%AA%E8%8B%B1%20%E4%BA%8E%E5%BF%97%E5%88%9A%20%E7%B1%B3%E9%93%81%E6%9F%B1&rft.date=2008-02&rft.volume=15&rft.issue=1&rft.spage=118&rft.epage=123&rft.pages=118-123&rft.issn=1005-9113&rft_id=info:doi/&rft_dat=%3Cwanfang_jour_chong%3Ehebgydxxb_e200801024%3C/wanfang_jour_chong%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rft_cqvip_id=26811698&rft_wanfj_id=hebgydxxb_e200801024&rfr_iscdi=true |