Comprehensive Analysis of DNA Repair Gene Variants and Risk of Meningioma
Background Meningiomas account for up to 37% of all primary brain tumors. Genetic susceptibility to meningioma is well established, with the risk among relatives of meningioma patients being approximately threefold higher than that in the general population. A relationship between risk of meningioma...
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creator | Bethke, Lara Murray, Anne Webb, Emily Schoemaker, Minouk Muir, Kenneth McKinney, Patricia Hepworth, Sarah Dimitropoulou, Polyxeni Lophatananon, Artitaya Feychting, Maria Lönn, Stefan Ahlbom, Anders Malmer, Beatrice Henriksson, Roger Auvinen, Anssi Kiuru, Anne Salminen, Tiina Johansen, Christoffer Christensen, Helle Collatz Kosteljanetz, Michael Swerdlow, Anthony Houlston, Richard |
description | Background Meningiomas account for up to 37% of all primary brain tumors. Genetic susceptibility to meningioma is well established, with the risk among relatives of meningioma patients being approximately threefold higher than that in the general population. A relationship between risk of meningioma and exposure to ionizing radiation is also well known and led us to examine whether variants in DNA repair genes contribute to disease susceptibility. Methods We analyzed 1127 tagging single-nucleotide polymorphisms (SNPs) that were selected to capture most of the common variation in 136 DNA repair genes in five case–control series (631 case patients and 637 control subjects) from four countries in Europe. We also analyzed 388 putative functional SNPs in these genes for their association with meningioma. All statistical tests were two-sided. Results The SNP rs4968451, which maps to intron 4 of the gene that encodes breast cancer susceptibility gene 1–interacting protein 1, was consistently associated with an increased risk of developing meningioma. Across the five studies, the association was highly statistically significant (trend odds ratio = 1.57, 95% confidence interval = 1.28 to 1.93; Ptrend = 8.95 × 10−6; P = .009 after adjusting for multiple testing). Conclusions We have identified a novel association between rs4968451 and meningioma risk. Because approximately 28% of the European population are carriers of at-risk genotypes for rs4968451, the variant is likely to make a substantial contribution to the development of meningioma. |
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Genetic susceptibility to meningioma is well established, with the risk among relatives of meningioma patients being approximately threefold higher than that in the general population. A relationship between risk of meningioma and exposure to ionizing radiation is also well known and led us to examine whether variants in DNA repair genes contribute to disease susceptibility. Methods We analyzed 1127 tagging single-nucleotide polymorphisms (SNPs) that were selected to capture most of the common variation in 136 DNA repair genes in five case–control series (631 case patients and 637 control subjects) from four countries in Europe. We also analyzed 388 putative functional SNPs in these genes for their association with meningioma. All statistical tests were two-sided. Results The SNP rs4968451, which maps to intron 4 of the gene that encodes breast cancer susceptibility gene 1–interacting protein 1, was consistently associated with an increased risk of developing meningioma. Across the five studies, the association was highly statistically significant (trend odds ratio = 1.57, 95% confidence interval = 1.28 to 1.93; Ptrend = 8.95 × 10−6; P = .009 after adjusting for multiple testing). Conclusions We have identified a novel association between rs4968451 and meningioma risk. Because approximately 28% of the European population are carriers of at-risk genotypes for rs4968451, the variant is likely to make a substantial contribution to the development of meningioma.</description><identifier>ISSN: 0027-8874</identifier><identifier>ISSN: 1460-2105</identifier><identifier>EISSN: 1460-2105</identifier><identifier>DOI: 10.1093/jnci/djn004</identifier><identifier>PMID: 18270339</identifier><identifier>CODEN: JNCIEQ</identifier><language>eng</language><publisher>Cary, NC: Oxford University Press</publisher><subject>Adult ; Aged ; Biological and medical sciences ; Brain ; breast cancer ; Case-Control Studies ; Deoxyribonucleic acid ; DNA ; DNA Repair - genetics ; dna repair gene ; Ethnicity ; Europe ; Female ; Genes ; Genetic Predisposition to Disease ; genotype ; Health risk assessment ; Humans ; introns ; ionizing ; Male ; Medical sciences ; Medicin och hälsovetenskap ; Meningeal Neoplasms - genetics ; meningioma ; Meningioma - genetics ; Middle Aged ; Neurology ; Odds Ratio ; Oncology ; Polymorphism ; Polymorphism, Single Nucleotide ; primary brain tumors ; Risk Assessment ; Risk Factors ; single nucleotide polymorphism radiation ; Tumors ; Tumors of the nervous system. Phacomatoses</subject><ispartof>JNCI : Journal of the National Cancer Institute, 2008-02, Vol.100 (4), p.270-276</ispartof><rights>The Author 2008. Published by Oxford University Press. 2008</rights><rights>2008 INIST-CNRS</rights><rights>The Author 2008. Published by Oxford University Press.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c605t-fa7af601458ab59437a07c7e26c12e07b4deca93d5f897522148326f70b5a9fc3</citedby><cites>FETCH-LOGICAL-c605t-fa7af601458ab59437a07c7e26c12e07b4deca93d5f897522148326f70b5a9fc3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,1584,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=20235315$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18270339$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-9063$$DView record from Swedish Publication Index$$Hfree_for_read</backlink><backlink>$$Uhttp://kipublications.ki.se/Default.aspx?queryparsed=id:116733740$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><creatorcontrib>Bethke, Lara</creatorcontrib><creatorcontrib>Murray, Anne</creatorcontrib><creatorcontrib>Webb, Emily</creatorcontrib><creatorcontrib>Schoemaker, Minouk</creatorcontrib><creatorcontrib>Muir, Kenneth</creatorcontrib><creatorcontrib>McKinney, Patricia</creatorcontrib><creatorcontrib>Hepworth, Sarah</creatorcontrib><creatorcontrib>Dimitropoulou, Polyxeni</creatorcontrib><creatorcontrib>Lophatananon, Artitaya</creatorcontrib><creatorcontrib>Feychting, Maria</creatorcontrib><creatorcontrib>Lönn, Stefan</creatorcontrib><creatorcontrib>Ahlbom, Anders</creatorcontrib><creatorcontrib>Malmer, Beatrice</creatorcontrib><creatorcontrib>Henriksson, Roger</creatorcontrib><creatorcontrib>Auvinen, Anssi</creatorcontrib><creatorcontrib>Kiuru, Anne</creatorcontrib><creatorcontrib>Salminen, Tiina</creatorcontrib><creatorcontrib>Johansen, Christoffer</creatorcontrib><creatorcontrib>Christensen, Helle Collatz</creatorcontrib><creatorcontrib>Kosteljanetz, Michael</creatorcontrib><creatorcontrib>Swerdlow, Anthony</creatorcontrib><creatorcontrib>Houlston, Richard</creatorcontrib><title>Comprehensive Analysis of DNA Repair Gene Variants and Risk of Meningioma</title><title>JNCI : Journal of the National Cancer Institute</title><addtitle>J Natl Cancer Inst</addtitle><description>Background Meningiomas account for up to 37% of all primary brain tumors. Genetic susceptibility to meningioma is well established, with the risk among relatives of meningioma patients being approximately threefold higher than that in the general population. A relationship between risk of meningioma and exposure to ionizing radiation is also well known and led us to examine whether variants in DNA repair genes contribute to disease susceptibility. Methods We analyzed 1127 tagging single-nucleotide polymorphisms (SNPs) that were selected to capture most of the common variation in 136 DNA repair genes in five case–control series (631 case patients and 637 control subjects) from four countries in Europe. We also analyzed 388 putative functional SNPs in these genes for their association with meningioma. All statistical tests were two-sided. Results The SNP rs4968451, which maps to intron 4 of the gene that encodes breast cancer susceptibility gene 1–interacting protein 1, was consistently associated with an increased risk of developing meningioma. Across the five studies, the association was highly statistically significant (trend odds ratio = 1.57, 95% confidence interval = 1.28 to 1.93; Ptrend = 8.95 × 10−6; P = .009 after adjusting for multiple testing). Conclusions We have identified a novel association between rs4968451 and meningioma risk. Because approximately 28% of the European population are carriers of at-risk genotypes for rs4968451, the variant is likely to make a substantial contribution to the development of meningioma.</description><subject>Adult</subject><subject>Aged</subject><subject>Biological and medical sciences</subject><subject>Brain</subject><subject>breast cancer</subject><subject>Case-Control Studies</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA Repair - genetics</subject><subject>dna repair gene</subject><subject>Ethnicity</subject><subject>Europe</subject><subject>Female</subject><subject>Genes</subject><subject>Genetic Predisposition to Disease</subject><subject>genotype</subject><subject>Health risk assessment</subject><subject>Humans</subject><subject>introns</subject><subject>ionizing</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Medicin och hälsovetenskap</subject><subject>Meningeal Neoplasms - genetics</subject><subject>meningioma</subject><subject>Meningioma - genetics</subject><subject>Middle Aged</subject><subject>Neurology</subject><subject>Odds Ratio</subject><subject>Oncology</subject><subject>Polymorphism</subject><subject>Polymorphism, Single Nucleotide</subject><subject>primary brain tumors</subject><subject>Risk Assessment</subject><subject>Risk Factors</subject><subject>single nucleotide polymorphism radiation</subject><subject>Tumors</subject><subject>Tumors of the nervous system. Phacomatoses</subject><issn>0027-8874</issn><issn>1460-2105</issn><issn>1460-2105</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFks1v0zAYxi0EYt3gxB1FSHBBYa-_4vhYdexD6mAaMCEulpM4w21jB7sZ7L_HVUMrIU3zxZb1e97PB6FXGD5gkPR44Wp73CwcAHuCJpgVkBMM_CmaABCRl6VgB-gwxgWkIwl7jg5wSQRQKifoYua7PpifxkV7Z7Kp06v7aGPm2-zk0zS7Nr22ITszzmQ3Oljt1jHTrsmubVxuoEvjrLu1vtMv0LNWr6J5Od5H6Nvpx6-z83z--exiNp3ndQF8nbda6LYAzHipKy4ZFRpELQwpakwMiIo1ptaSNrwtpeCEYFZSUrQCKq5lW9MjlG_jxt-mHyrVB9vpcK-8tmr8WqaXUbzgEnDi5YN8H3yzF_0TYlwISgWDpH3_oPbE3kyVD7dq6AYloaCJfrelU9hfg4lr1dlYm9VKO-OHqNLIMQcoHwUJCJHaZgl88x-48ENIO0oMASkhjW9fZB18jMG0uzIxqI1D1MYhauuQRL8eQw5VZ5o9O1oiAW9HQMdar9qgkzruOAKE8tTHvgk_9I9kHBdm49r82aE6LFWas-Dq_PsP9eW0FPOrq1Jd0r8QZeAc</recordid><startdate>20080220</startdate><enddate>20080220</enddate><creator>Bethke, Lara</creator><creator>Murray, Anne</creator><creator>Webb, Emily</creator><creator>Schoemaker, Minouk</creator><creator>Muir, Kenneth</creator><creator>McKinney, Patricia</creator><creator>Hepworth, Sarah</creator><creator>Dimitropoulou, Polyxeni</creator><creator>Lophatananon, Artitaya</creator><creator>Feychting, Maria</creator><creator>Lönn, Stefan</creator><creator>Ahlbom, Anders</creator><creator>Malmer, Beatrice</creator><creator>Henriksson, Roger</creator><creator>Auvinen, Anssi</creator><creator>Kiuru, Anne</creator><creator>Salminen, Tiina</creator><creator>Johansen, Christoffer</creator><creator>Christensen, Helle Collatz</creator><creator>Kosteljanetz, Michael</creator><creator>Swerdlow, Anthony</creator><creator>Houlston, Richard</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TO</scope><scope>7U7</scope><scope>7U9</scope><scope>C1K</scope><scope>H94</scope><scope>K9.</scope><scope>NAPCQ</scope><scope>7TM</scope><scope>7U1</scope><scope>7U2</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>ADTPV</scope><scope>AOWAS</scope><scope>D93</scope></search><sort><creationdate>20080220</creationdate><title>Comprehensive Analysis of DNA Repair Gene Variants and Risk of Meningioma</title><author>Bethke, Lara ; Murray, Anne ; Webb, Emily ; Schoemaker, Minouk ; Muir, Kenneth ; McKinney, Patricia ; Hepworth, Sarah ; Dimitropoulou, Polyxeni ; Lophatananon, Artitaya ; Feychting, Maria ; Lönn, Stefan ; Ahlbom, Anders ; Malmer, Beatrice ; Henriksson, Roger ; Auvinen, Anssi ; Kiuru, Anne ; Salminen, Tiina ; Johansen, Christoffer ; Christensen, Helle Collatz ; Kosteljanetz, Michael ; Swerdlow, Anthony ; Houlston, Richard</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c605t-fa7af601458ab59437a07c7e26c12e07b4deca93d5f897522148326f70b5a9fc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Adult</topic><topic>Aged</topic><topic>Biological and medical sciences</topic><topic>Brain</topic><topic>breast cancer</topic><topic>Case-Control Studies</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA Repair - genetics</topic><topic>dna repair gene</topic><topic>Ethnicity</topic><topic>Europe</topic><topic>Female</topic><topic>Genes</topic><topic>Genetic Predisposition to Disease</topic><topic>genotype</topic><topic>Health risk assessment</topic><topic>Humans</topic><topic>introns</topic><topic>ionizing</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Medicin och hälsovetenskap</topic><topic>Meningeal Neoplasms - genetics</topic><topic>meningioma</topic><topic>Meningioma - genetics</topic><topic>Middle Aged</topic><topic>Neurology</topic><topic>Odds Ratio</topic><topic>Oncology</topic><topic>Polymorphism</topic><topic>Polymorphism, Single Nucleotide</topic><topic>primary brain tumors</topic><topic>Risk Assessment</topic><topic>Risk Factors</topic><topic>single nucleotide polymorphism radiation</topic><topic>Tumors</topic><topic>Tumors of the nervous system. Phacomatoses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bethke, Lara</creatorcontrib><creatorcontrib>Murray, Anne</creatorcontrib><creatorcontrib>Webb, Emily</creatorcontrib><creatorcontrib>Schoemaker, Minouk</creatorcontrib><creatorcontrib>Muir, Kenneth</creatorcontrib><creatorcontrib>McKinney, Patricia</creatorcontrib><creatorcontrib>Hepworth, Sarah</creatorcontrib><creatorcontrib>Dimitropoulou, Polyxeni</creatorcontrib><creatorcontrib>Lophatananon, Artitaya</creatorcontrib><creatorcontrib>Feychting, Maria</creatorcontrib><creatorcontrib>Lönn, Stefan</creatorcontrib><creatorcontrib>Ahlbom, Anders</creatorcontrib><creatorcontrib>Malmer, Beatrice</creatorcontrib><creatorcontrib>Henriksson, Roger</creatorcontrib><creatorcontrib>Auvinen, Anssi</creatorcontrib><creatorcontrib>Kiuru, Anne</creatorcontrib><creatorcontrib>Salminen, Tiina</creatorcontrib><creatorcontrib>Johansen, Christoffer</creatorcontrib><creatorcontrib>Christensen, Helle Collatz</creatorcontrib><creatorcontrib>Kosteljanetz, Michael</creatorcontrib><creatorcontrib>Swerdlow, Anthony</creatorcontrib><creatorcontrib>Houlston, Richard</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Premium</collection><collection>Nucleic Acids Abstracts</collection><collection>Risk Abstracts</collection><collection>Safety Science and Risk</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>SwePub</collection><collection>SwePub Articles</collection><collection>SWEPUB Umeå universitet</collection><jtitle>JNCI : Journal of the National Cancer Institute</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bethke, Lara</au><au>Murray, Anne</au><au>Webb, Emily</au><au>Schoemaker, Minouk</au><au>Muir, Kenneth</au><au>McKinney, Patricia</au><au>Hepworth, Sarah</au><au>Dimitropoulou, Polyxeni</au><au>Lophatananon, Artitaya</au><au>Feychting, Maria</au><au>Lönn, Stefan</au><au>Ahlbom, Anders</au><au>Malmer, Beatrice</au><au>Henriksson, Roger</au><au>Auvinen, Anssi</au><au>Kiuru, Anne</au><au>Salminen, Tiina</au><au>Johansen, Christoffer</au><au>Christensen, Helle Collatz</au><au>Kosteljanetz, Michael</au><au>Swerdlow, Anthony</au><au>Houlston, Richard</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comprehensive Analysis of DNA Repair Gene Variants and Risk of Meningioma</atitle><jtitle>JNCI : Journal of the National Cancer Institute</jtitle><addtitle>J Natl Cancer Inst</addtitle><date>2008-02-20</date><risdate>2008</risdate><volume>100</volume><issue>4</issue><spage>270</spage><epage>276</epage><pages>270-276</pages><issn>0027-8874</issn><issn>1460-2105</issn><eissn>1460-2105</eissn><coden>JNCIEQ</coden><abstract>Background Meningiomas account for up to 37% of all primary brain tumors. Genetic susceptibility to meningioma is well established, with the risk among relatives of meningioma patients being approximately threefold higher than that in the general population. A relationship between risk of meningioma and exposure to ionizing radiation is also well known and led us to examine whether variants in DNA repair genes contribute to disease susceptibility. Methods We analyzed 1127 tagging single-nucleotide polymorphisms (SNPs) that were selected to capture most of the common variation in 136 DNA repair genes in five case–control series (631 case patients and 637 control subjects) from four countries in Europe. We also analyzed 388 putative functional SNPs in these genes for their association with meningioma. All statistical tests were two-sided. Results The SNP rs4968451, which maps to intron 4 of the gene that encodes breast cancer susceptibility gene 1–interacting protein 1, was consistently associated with an increased risk of developing meningioma. Across the five studies, the association was highly statistically significant (trend odds ratio = 1.57, 95% confidence interval = 1.28 to 1.93; Ptrend = 8.95 × 10−6; P = .009 after adjusting for multiple testing). Conclusions We have identified a novel association between rs4968451 and meningioma risk. Because approximately 28% of the European population are carriers of at-risk genotypes for rs4968451, the variant is likely to make a substantial contribution to the development of meningioma.</abstract><cop>Cary, NC</cop><pub>Oxford University Press</pub><pmid>18270339</pmid><doi>10.1093/jnci/djn004</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adult Aged Biological and medical sciences Brain breast cancer Case-Control Studies Deoxyribonucleic acid DNA DNA Repair - genetics dna repair gene Ethnicity Europe Female Genes Genetic Predisposition to Disease genotype Health risk assessment Humans introns ionizing Male Medical sciences Medicin och hälsovetenskap Meningeal Neoplasms - genetics meningioma Meningioma - genetics Middle Aged Neurology Odds Ratio Oncology Polymorphism Polymorphism, Single Nucleotide primary brain tumors Risk Assessment Risk Factors single nucleotide polymorphism radiation Tumors Tumors of the nervous system. Phacomatoses |
title | Comprehensive Analysis of DNA Repair Gene Variants and Risk of Meningioma |
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