Multiple glucose 6-phosphate dehydrogenase-deficient variants correlate with malaria endemicity in the Vanuatu Archipelago (southwestern Pacific)
In studying the relationship between genetic abnormalities of red blood cells and malaria endemicity in the Vanuatu archipelago in the southwestern Pacific, we have found that of 1,442 males tested, 98 (6.8%) were G6PD deficient. The prevalence of GdPD deficiency varied widely (0%-39%), both from on...
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Veröffentlicht in: | American journal of human genetics 1995, Vol.56 (1), p.294-301 |
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description | In studying the relationship between genetic abnormalities of red blood cells and malaria endemicity in the Vanuatu archipelago in the southwestern Pacific, we have found that of 1,442 males tested, 98 (6.8%) were G6PD deficient. The prevalence of GdPD deficiency varied widely (0%-39%), both from one island to another and in different parts of the same island, and generally correlated positively with the degree of malaria transmission. The properties of G6PD from GdPD-deficient subjects were analyzed in a subset of 53 samples. In all cases the residual red-blood-cell activity was < 10%. There were three phenotypic patterns. PCR amplification and sequencing of the entire coding region of the G6PD gene showed that the first of these patterns corresponded to G6PD Union (nucleotide 1360C-->T; amino acid 454Arg-->Cys), previously encountered elsewhere. Analysis of samples exhibiting the second pattern revealed two new mutants: G6PD Vanua Lava (nucleotide 383T-->C; amino acid 128Leu-->Pro) and G6PD Namoru (nucleotide 208T-->C; amino acid 70Tyr-->His); in three samples, the underlying mutation has not yet been identified. Analysis of the sample exhibiting the third pattern revealed another new mutant: G6PD Naone (nucleotide 497G-->A; amino acid 166Arg-->His). Of the four mutations, G6PD Union and G6PD Vanua Lava have a polymorphic frequency in more than one island; and G6PD Vanua Lava has also been detected in a sample from Papua New Guinea. G6PD deficiency is of clinical importance in Vanuatu because it is a cause of neonatal jaundice and is responsible for numerous episodes of drug-induced acute hemolytic anemia. |
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K ; VULLIAMY, T. J ; KANEKO, A ; CLEGG, J. B ; WEATHERALL, D. J ; LUZZATTO, L</creator><creatorcontrib>GANCZAKOWSKI, M ; TOWN, M ; BOWDEN, D. K ; VULLIAMY, T. J ; KANEKO, A ; CLEGG, J. B ; WEATHERALL, D. J ; LUZZATTO, L</creatorcontrib><description>In studying the relationship between genetic abnormalities of red blood cells and malaria endemicity in the Vanuatu archipelago in the southwestern Pacific, we have found that of 1,442 males tested, 98 (6.8%) were G6PD deficient. The prevalence of GdPD deficiency varied widely (0%-39%), both from one island to another and in different parts of the same island, and generally correlated positively with the degree of malaria transmission. The properties of G6PD from GdPD-deficient subjects were analyzed in a subset of 53 samples. In all cases the residual red-blood-cell activity was < 10%. There were three phenotypic patterns. PCR amplification and sequencing of the entire coding region of the G6PD gene showed that the first of these patterns corresponded to G6PD Union (nucleotide 1360C-->T; amino acid 454Arg-->Cys), previously encountered elsewhere. Analysis of samples exhibiting the second pattern revealed two new mutants: G6PD Vanua Lava (nucleotide 383T-->C; amino acid 128Leu-->Pro) and G6PD Namoru (nucleotide 208T-->C; amino acid 70Tyr-->His); in three samples, the underlying mutation has not yet been identified. Analysis of the sample exhibiting the third pattern revealed another new mutant: G6PD Naone (nucleotide 497G-->A; amino acid 166Arg-->His). Of the four mutations, G6PD Union and G6PD Vanua Lava have a polymorphic frequency in more than one island; and G6PD Vanua Lava has also been detected in a sample from Papua New Guinea. G6PD deficiency is of clinical importance in Vanuatu because it is a cause of neonatal jaundice and is responsible for numerous episodes of drug-induced acute hemolytic anemia.</description><identifier>ISSN: 0002-9297</identifier><identifier>EISSN: 1537-6605</identifier><identifier>PMID: 7825590</identifier><identifier>CODEN: AJHGAG</identifier><language>eng</language><publisher>Chicago, IL: University of Chicago Press</publisher><subject>Adolescent ; Adult ; Anemia, Hemolytic - chemically induced ; Anemia, Hemolytic - genetics ; Base Sequence ; Biological and medical sciences ; Child ; Child, Preschool ; Cluster Analysis ; DNA Mutational Analysis ; Female ; Genetic Predisposition to Disease ; Glucosephosphate Dehydrogenase - genetics ; Glucosephosphate Dehydrogenase Deficiency - epidemiology ; Glucosephosphate Dehydrogenase Deficiency - genetics ; Human protozoal diseases ; Humans ; Infant ; Infant, Newborn ; Infectious diseases ; Jaundice, Neonatal - chemically induced ; Jaundice, Neonatal - genetics ; Malaria ; Malaria - epidemiology ; Male ; Medical sciences ; Middle Aged ; Molecular Sequence Data ; Neonatal Screening ; Parasitic diseases ; Point Mutation ; Polymerase Chain Reaction ; Polymorphism, Single-Stranded Conformational ; Prevalence ; Protozoal diseases ; Selection, Genetic ; Vanuatu - epidemiology ; X Chromosome</subject><ispartof>American journal of human genetics, 1995, Vol.56 (1), p.294-301</ispartof><rights>1995 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1801293/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1801293/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,725,778,782,883,4012,53778,53780</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=3412636$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/7825590$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttp://kipublications.ki.se/Default.aspx?queryparsed=id:112742148$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><creatorcontrib>GANCZAKOWSKI, M</creatorcontrib><creatorcontrib>TOWN, M</creatorcontrib><creatorcontrib>BOWDEN, D. K</creatorcontrib><creatorcontrib>VULLIAMY, T. J</creatorcontrib><creatorcontrib>KANEKO, A</creatorcontrib><creatorcontrib>CLEGG, J. B</creatorcontrib><creatorcontrib>WEATHERALL, D. J</creatorcontrib><creatorcontrib>LUZZATTO, L</creatorcontrib><title>Multiple glucose 6-phosphate dehydrogenase-deficient variants correlate with malaria endemicity in the Vanuatu Archipelago (southwestern Pacific)</title><title>American journal of human genetics</title><addtitle>Am J Hum Genet</addtitle><description>In studying the relationship between genetic abnormalities of red blood cells and malaria endemicity in the Vanuatu archipelago in the southwestern Pacific, we have found that of 1,442 males tested, 98 (6.8%) were G6PD deficient. The prevalence of GdPD deficiency varied widely (0%-39%), both from one island to another and in different parts of the same island, and generally correlated positively with the degree of malaria transmission. The properties of G6PD from GdPD-deficient subjects were analyzed in a subset of 53 samples. In all cases the residual red-blood-cell activity was < 10%. There were three phenotypic patterns. PCR amplification and sequencing of the entire coding region of the G6PD gene showed that the first of these patterns corresponded to G6PD Union (nucleotide 1360C-->T; amino acid 454Arg-->Cys), previously encountered elsewhere. Analysis of samples exhibiting the second pattern revealed two new mutants: G6PD Vanua Lava (nucleotide 383T-->C; amino acid 128Leu-->Pro) and G6PD Namoru (nucleotide 208T-->C; amino acid 70Tyr-->His); in three samples, the underlying mutation has not yet been identified. Analysis of the sample exhibiting the third pattern revealed another new mutant: G6PD Naone (nucleotide 497G-->A; amino acid 166Arg-->His). Of the four mutations, G6PD Union and G6PD Vanua Lava have a polymorphic frequency in more than one island; and G6PD Vanua Lava has also been detected in a sample from Papua New Guinea. G6PD deficiency is of clinical importance in Vanuatu because it is a cause of neonatal jaundice and is responsible for numerous episodes of drug-induced acute hemolytic anemia.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Anemia, Hemolytic - chemically induced</subject><subject>Anemia, Hemolytic - genetics</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Child</subject><subject>Child, Preschool</subject><subject>Cluster Analysis</subject><subject>DNA Mutational Analysis</subject><subject>Female</subject><subject>Genetic Predisposition to Disease</subject><subject>Glucosephosphate Dehydrogenase - genetics</subject><subject>Glucosephosphate Dehydrogenase Deficiency - epidemiology</subject><subject>Glucosephosphate Dehydrogenase Deficiency - genetics</subject><subject>Human protozoal diseases</subject><subject>Humans</subject><subject>Infant</subject><subject>Infant, Newborn</subject><subject>Infectious diseases</subject><subject>Jaundice, Neonatal - chemically induced</subject><subject>Jaundice, Neonatal - genetics</subject><subject>Malaria</subject><subject>Malaria - epidemiology</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Middle Aged</subject><subject>Molecular Sequence Data</subject><subject>Neonatal Screening</subject><subject>Parasitic diseases</subject><subject>Point Mutation</subject><subject>Polymerase Chain Reaction</subject><subject>Polymorphism, Single-Stranded Conformational</subject><subject>Prevalence</subject><subject>Protozoal diseases</subject><subject>Selection, Genetic</subject><subject>Vanuatu - epidemiology</subject><subject>X Chromosome</subject><issn>0002-9297</issn><issn>1537-6605</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1995</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkV1L5DAUhosos6O7P0HIhRfuRSEfTdvcLIioKyh6sXpbTtOTabSTliR1mJ_hP94MDqJXCXme94VzcpAtmRRVXpZUHmZLSinPFVfVj-w4hBdKGaupWGSLquZSKrrM3u_nIdppQLIaZj0GJGU-9WOYeohIOuy3nR9X6CBg3qGx2qKL5A28BRcD0aP3OOzUjY09WcOwIwRdh-vkxi2xjsQeyTO4GeJMLrzu7ZQiq5Gch3GO_QZDRO_II2ib-n__zI4MDAF_7c-T7On66t_l3_zu4eb28uIunwSvY14rQ0UpJNO8qGknOGspM1wZycpWVFoWXLVoCtpxqniFCqAEpo2RXWs4r8RJln_0hg1Oc9tM3q7Bb5sRbLN_ek03bIpCUC6T_-fDT2SNnU578DB8i30nzvbNanxr0soZVyIVnH4t-Ezu_yLxsz2HoGEwHpy24VMTBeNlmvg_p4yYsQ</recordid><startdate>1995</startdate><enddate>1995</enddate><creator>GANCZAKOWSKI, M</creator><creator>TOWN, M</creator><creator>BOWDEN, D. K</creator><creator>VULLIAMY, T. J</creator><creator>KANEKO, A</creator><creator>CLEGG, J. B</creator><creator>WEATHERALL, D. J</creator><creator>LUZZATTO, L</creator><general>University of Chicago Press</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>5PM</scope><scope>ADTPV</scope><scope>AOWAS</scope></search><sort><creationdate>1995</creationdate><title>Multiple glucose 6-phosphate dehydrogenase-deficient variants correlate with malaria endemicity in the Vanuatu Archipelago (southwestern Pacific)</title><author>GANCZAKOWSKI, M ; TOWN, M ; BOWDEN, D. K ; VULLIAMY, T. J ; KANEKO, A ; CLEGG, J. B ; WEATHERALL, D. J ; LUZZATTO, L</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p328t-89f036351c2480d321b01f29f516b37c5429bef40d20927e9aa6a1cff5dbf2273</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1995</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Anemia, Hemolytic - chemically induced</topic><topic>Anemia, Hemolytic - genetics</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Child</topic><topic>Child, Preschool</topic><topic>Cluster Analysis</topic><topic>DNA Mutational Analysis</topic><topic>Female</topic><topic>Genetic Predisposition to Disease</topic><topic>Glucosephosphate Dehydrogenase - genetics</topic><topic>Glucosephosphate Dehydrogenase Deficiency - epidemiology</topic><topic>Glucosephosphate Dehydrogenase Deficiency - genetics</topic><topic>Human protozoal diseases</topic><topic>Humans</topic><topic>Infant</topic><topic>Infant, Newborn</topic><topic>Infectious diseases</topic><topic>Jaundice, Neonatal - chemically induced</topic><topic>Jaundice, Neonatal - genetics</topic><topic>Malaria</topic><topic>Malaria - epidemiology</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Middle Aged</topic><topic>Molecular Sequence Data</topic><topic>Neonatal Screening</topic><topic>Parasitic diseases</topic><topic>Point Mutation</topic><topic>Polymerase Chain Reaction</topic><topic>Polymorphism, Single-Stranded Conformational</topic><topic>Prevalence</topic><topic>Protozoal diseases</topic><topic>Selection, Genetic</topic><topic>Vanuatu - epidemiology</topic><topic>X Chromosome</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>GANCZAKOWSKI, M</creatorcontrib><creatorcontrib>TOWN, M</creatorcontrib><creatorcontrib>BOWDEN, D. K</creatorcontrib><creatorcontrib>VULLIAMY, T. J</creatorcontrib><creatorcontrib>KANEKO, A</creatorcontrib><creatorcontrib>CLEGG, J. B</creatorcontrib><creatorcontrib>WEATHERALL, D. J</creatorcontrib><creatorcontrib>LUZZATTO, L</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>PubMed Central (Full Participant titles)</collection><collection>SwePub</collection><collection>SwePub Articles</collection><jtitle>American journal of human genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>GANCZAKOWSKI, M</au><au>TOWN, M</au><au>BOWDEN, D. K</au><au>VULLIAMY, T. J</au><au>KANEKO, A</au><au>CLEGG, J. B</au><au>WEATHERALL, D. J</au><au>LUZZATTO, L</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Multiple glucose 6-phosphate dehydrogenase-deficient variants correlate with malaria endemicity in the Vanuatu Archipelago (southwestern Pacific)</atitle><jtitle>American journal of human genetics</jtitle><addtitle>Am J Hum Genet</addtitle><date>1995</date><risdate>1995</risdate><volume>56</volume><issue>1</issue><spage>294</spage><epage>301</epage><pages>294-301</pages><issn>0002-9297</issn><eissn>1537-6605</eissn><coden>AJHGAG</coden><abstract>In studying the relationship between genetic abnormalities of red blood cells and malaria endemicity in the Vanuatu archipelago in the southwestern Pacific, we have found that of 1,442 males tested, 98 (6.8%) were G6PD deficient. The prevalence of GdPD deficiency varied widely (0%-39%), both from one island to another and in different parts of the same island, and generally correlated positively with the degree of malaria transmission. The properties of G6PD from GdPD-deficient subjects were analyzed in a subset of 53 samples. In all cases the residual red-blood-cell activity was < 10%. There were three phenotypic patterns. PCR amplification and sequencing of the entire coding region of the G6PD gene showed that the first of these patterns corresponded to G6PD Union (nucleotide 1360C-->T; amino acid 454Arg-->Cys), previously encountered elsewhere. Analysis of samples exhibiting the second pattern revealed two new mutants: G6PD Vanua Lava (nucleotide 383T-->C; amino acid 128Leu-->Pro) and G6PD Namoru (nucleotide 208T-->C; amino acid 70Tyr-->His); in three samples, the underlying mutation has not yet been identified. Analysis of the sample exhibiting the third pattern revealed another new mutant: G6PD Naone (nucleotide 497G-->A; amino acid 166Arg-->His). Of the four mutations, G6PD Union and G6PD Vanua Lava have a polymorphic frequency in more than one island; and G6PD Vanua Lava has also been detected in a sample from Papua New Guinea. G6PD deficiency is of clinical importance in Vanuatu because it is a cause of neonatal jaundice and is responsible for numerous episodes of drug-induced acute hemolytic anemia.</abstract><cop>Chicago, IL</cop><pub>University of Chicago Press</pub><pmid>7825590</pmid><tpages>8</tpages></addata></record> |
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subjects | Adolescent Adult Anemia, Hemolytic - chemically induced Anemia, Hemolytic - genetics Base Sequence Biological and medical sciences Child Child, Preschool Cluster Analysis DNA Mutational Analysis Female Genetic Predisposition to Disease Glucosephosphate Dehydrogenase - genetics Glucosephosphate Dehydrogenase Deficiency - epidemiology Glucosephosphate Dehydrogenase Deficiency - genetics Human protozoal diseases Humans Infant Infant, Newborn Infectious diseases Jaundice, Neonatal - chemically induced Jaundice, Neonatal - genetics Malaria Malaria - epidemiology Male Medical sciences Middle Aged Molecular Sequence Data Neonatal Screening Parasitic diseases Point Mutation Polymerase Chain Reaction Polymorphism, Single-Stranded Conformational Prevalence Protozoal diseases Selection, Genetic Vanuatu - epidemiology X Chromosome |
title | Multiple glucose 6-phosphate dehydrogenase-deficient variants correlate with malaria endemicity in the Vanuatu Archipelago (southwestern Pacific) |
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