Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment
The relative importance of size and composition of microbial communities in ecosystem functioning is poorly understood. Here, we investigated how community composition and size of selected functional guilds in the nitrogen cycle correlated with agroecosystem functioning, which was defined as microbi...
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| Veröffentlicht in: | The ISME Journal 2009-05, Vol.3 (5), p.597-605 |
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| description | The relative importance of size and composition of microbial communities in ecosystem functioning is poorly understood. Here, we investigated how community composition and size of selected functional guilds in the nitrogen cycle correlated with agroecosystem functioning, which was defined as microbial process rates, total crop yield and nitrogen content in the crop. Soil was sampled from a 50-year fertilizer trial and the treatments comprised unfertilized bare fallow, unfertilized with crop, and plots with crop fertilized with calcium nitrate, ammonium sulfate, solid cattle manure or sewage sludge. The size of the functional guilds and the total bacterial community were greatly affected by the fertilization regimes, especially by the sewage sludge and ammonium sulfate treatments. The community size results were combined with previously published data on the composition of the corresponding communities, potential ammonia oxidation, denitrification, basal and substrate-induced respiration rates, in addition to crop yield for an integrated analysis. It was found that differences in size, rather than composition, correlated with differences in process rates for the denitrifier and ammonia-oxidizing archaeal and total bacterial communities, whereas neither differences in size nor composition was correlated with differences in process rates for the ammonia-oxidizing bacterial community. In contrast, the composition of nitrate-reducing, denitrifying and total bacterial communities co-varied with primary production and both were strongly linked to soil properties. |
| doi_str_mv | 10.1038/ismej.2008.128 |
| format | Article |
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Here, we investigated how community composition and size of selected functional guilds in the nitrogen cycle correlated with agroecosystem functioning, which was defined as microbial process rates, total crop yield and nitrogen content in the crop. Soil was sampled from a 50-year fertilizer trial and the treatments comprised unfertilized bare fallow, unfertilized with crop, and plots with crop fertilized with calcium nitrate, ammonium sulfate, solid cattle manure or sewage sludge. The size of the functional guilds and the total bacterial community were greatly affected by the fertilization regimes, especially by the sewage sludge and ammonium sulfate treatments. The community size results were combined with previously published data on the composition of the corresponding communities, potential ammonia oxidation, denitrification, basal and substrate-induced respiration rates, in addition to crop yield for an integrated analysis. It was found that differences in size, rather than composition, correlated with differences in process rates for the denitrifier and ammonia-oxidizing archaeal and total bacterial communities, whereas neither differences in size nor composition was correlated with differences in process rates for the ammonia-oxidizing bacterial community. In contrast, the composition of nitrate-reducing, denitrifying and total bacterial communities co-varied with primary production and both were strongly linked to soil properties.</description><identifier>ISSN: 1751-7362</identifier><identifier>ISSN: 1751-7370</identifier><identifier>EISSN: 1751-7370</identifier><identifier>DOI: 10.1038/ismej.2008.128</identifier><identifier>PMID: 19148144</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>Agricultural ecosystems ; Agricultural Science ; Ammonia ; Ammonium ; Archaea - genetics ; Archaea - growth & development ; Bacteria ; Bacteria - genetics ; Bacteria - growth & development ; Biomass ; Biomedical and Life Sciences ; Calcium ; Cattle ; Cattle manure ; Colony Count, Microbial - methods ; Community composition ; Crop yield ; Crops, Agricultural - chemistry ; Crops, Agricultural - growth & development ; Denitrification ; Ecological function ; Ecology ; Ecosystem ; Ekologi ; Environmental Sciences related to Agriculture and Land-use ; Evolutionary Biology ; Fertilizers ; Fertilizers - microbiology ; Jordbruksvetenskap ; Life Sciences ; Microbial activity ; Microbial Ecology ; Microbial Genetics and Genomics ; Microbiology ; Microbiology and Parasitology ; Mikrobiologi ; Miljö- och naturvårdsvetenskap ; Nitrates ; Nitrogen - metabolism ; Nitrogen cycle ; original-article ; Oxidation ; Primary production ; Respiration ; Sewage sludge ; Soil Microbiology ; Soil properties ; Sulfates</subject><ispartof>The ISME Journal, 2009-05, Vol.3 (5), p.597-605</ispartof><rights>International Society for Microbial Ecology 2009</rights><rights>Copyright Nature Publishing Group May 2009</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c570t-af9c5a6f5ebfb91ecaf4209e50ee980c9b924b80426930c34c125bf6254f9e203</citedby><cites>FETCH-LOGICAL-c570t-af9c5a6f5ebfb91ecaf4209e50ee980c9b924b80426930c34c125bf6254f9e203</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19148144$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.inrae.fr/hal-02666181$$DView record in HAL$$Hfree_for_read</backlink><backlink>$$Uhttps://res.slu.se/id/publ/61620$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><creatorcontrib>Hallin, Sara</creatorcontrib><creatorcontrib>Jones, Christopher M</creatorcontrib><creatorcontrib>Schloter, Michael</creatorcontrib><creatorcontrib>Philippot, Laurent</creatorcontrib><creatorcontrib>Sveriges lantbruksuniversitet</creatorcontrib><title>Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment</title><title>The ISME Journal</title><addtitle>ISME J</addtitle><addtitle>ISME J</addtitle><description>The relative importance of size and composition of microbial communities in ecosystem functioning is poorly understood. Here, we investigated how community composition and size of selected functional guilds in the nitrogen cycle correlated with agroecosystem functioning, which was defined as microbial process rates, total crop yield and nitrogen content in the crop. Soil was sampled from a 50-year fertilizer trial and the treatments comprised unfertilized bare fallow, unfertilized with crop, and plots with crop fertilized with calcium nitrate, ammonium sulfate, solid cattle manure or sewage sludge. The size of the functional guilds and the total bacterial community were greatly affected by the fertilization regimes, especially by the sewage sludge and ammonium sulfate treatments. The community size results were combined with previously published data on the composition of the corresponding communities, potential ammonia oxidation, denitrification, basal and substrate-induced respiration rates, in addition to crop yield for an integrated analysis. It was found that differences in size, rather than composition, correlated with differences in process rates for the denitrifier and ammonia-oxidizing archaeal and total bacterial communities, whereas neither differences in size nor composition was correlated with differences in process rates for the ammonia-oxidizing bacterial community. In contrast, the composition of nitrate-reducing, denitrifying and total bacterial communities co-varied with primary production and both were strongly linked to soil properties.</description><subject>Agricultural ecosystems</subject><subject>Agricultural Science</subject><subject>Ammonia</subject><subject>Ammonium</subject><subject>Archaea - genetics</subject><subject>Archaea - growth & development</subject><subject>Bacteria</subject><subject>Bacteria - genetics</subject><subject>Bacteria - growth & development</subject><subject>Biomass</subject><subject>Biomedical and Life Sciences</subject><subject>Calcium</subject><subject>Cattle</subject><subject>Cattle manure</subject><subject>Colony Count, Microbial - methods</subject><subject>Community composition</subject><subject>Crop yield</subject><subject>Crops, Agricultural - chemistry</subject><subject>Crops, Agricultural - growth & development</subject><subject>Denitrification</subject><subject>Ecological function</subject><subject>Ecology</subject><subject>Ecosystem</subject><subject>Ekologi</subject><subject>Environmental Sciences related to Agriculture and Land-use</subject><subject>Evolutionary Biology</subject><subject>Fertilizers</subject><subject>Fertilizers - microbiology</subject><subject>Jordbruksvetenskap</subject><subject>Life Sciences</subject><subject>Microbial activity</subject><subject>Microbial Ecology</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Microbiology and Parasitology</subject><subject>Mikrobiologi</subject><subject>Miljö- och naturvårdsvetenskap</subject><subject>Nitrates</subject><subject>Nitrogen - metabolism</subject><subject>Nitrogen cycle</subject><subject>original-article</subject><subject>Oxidation</subject><subject>Primary production</subject><subject>Respiration</subject><subject>Sewage sludge</subject><subject>Soil Microbiology</subject><subject>Soil properties</subject><subject>Sulfates</subject><issn>1751-7362</issn><issn>1751-7370</issn><issn>1751-7370</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqFkt1rFDEUxQdRbK2--igBQfBhtjeZTCZ5LMVaYVEQfQ6Z7E2bJZMZkxnr9q93ZnepHwg-3ZD87rmXk1MULymsKFTy3OcOtysGIFeUyUfFKW1qWjZVA48fzoKdFM9y3gLUjRDN0-KEKsol5fy0iJ8xmNH3Md_6gbQ43iFG8rG0Oxt8vCG277op-tFjJiZuCNo-7_KIHXFTtEvjQvlIDKmh3KFJZR82xGEaffD3e2mCPwZMvsM4Pi-eOBMyvjjWs-Lr1bsvl9fl-tP7D5cX69LWDYylccrWRrgaW9cqitY4zkBhDYhKglWtYryVwJlQFdiKW8rq1glWc6eQQXVWlAfdfIfD1OphHm_STvfG6xym1qSl6IxaULHn3x74WxP-gK8v1nq5AyaEoJJ-pzP75sAOqf82YR5157PFEEzEfspaNLOzjPP_gowCbUS1KL7-C9z2U4qzQZoCU1IKydVMrQ6UTX3OCd3DohT0Ega9D4NewqDnMMwNr46yU9vh5hd-_P0ZOD-6ND_FG0y_z_2n5E9CwsFG</recordid><startdate>20090501</startdate><enddate>20090501</enddate><creator>Hallin, Sara</creator><creator>Jones, Christopher M</creator><creator>Schloter, Michael</creator><creator>Philippot, Laurent</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7SN</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>SOI</scope><scope>7U6</scope><scope>7X8</scope><scope>1XC</scope><scope>ADTPV</scope><scope>AOWAS</scope></search><sort><creationdate>20090501</creationdate><title>Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment</title><author>Hallin, Sara ; Jones, Christopher M ; Schloter, Michael ; Philippot, Laurent</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c570t-af9c5a6f5ebfb91ecaf4209e50ee980c9b924b80426930c34c125bf6254f9e203</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Agricultural ecosystems</topic><topic>Agricultural Science</topic><topic>Ammonia</topic><topic>Ammonium</topic><topic>Archaea - 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metabolism</topic><topic>Nitrogen cycle</topic><topic>original-article</topic><topic>Oxidation</topic><topic>Primary production</topic><topic>Respiration</topic><topic>Sewage sludge</topic><topic>Soil Microbiology</topic><topic>Soil properties</topic><topic>Sulfates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hallin, Sara</creatorcontrib><creatorcontrib>Jones, Christopher M</creatorcontrib><creatorcontrib>Schloter, Michael</creatorcontrib><creatorcontrib>Philippot, Laurent</creatorcontrib><creatorcontrib>Sveriges lantbruksuniversitet</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Ecology Abstracts</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>Environment Abstracts</collection><collection>Sustainability Science Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>SwePub</collection><collection>SwePub Articles</collection><jtitle>The ISME Journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hallin, Sara</au><au>Jones, Christopher M</au><au>Schloter, Michael</au><au>Philippot, Laurent</au><aucorp>Sveriges lantbruksuniversitet</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment</atitle><jtitle>The ISME Journal</jtitle><stitle>ISME J</stitle><addtitle>ISME J</addtitle><date>2009-05-01</date><risdate>2009</risdate><volume>3</volume><issue>5</issue><spage>597</spage><epage>605</epage><pages>597-605</pages><issn>1751-7362</issn><issn>1751-7370</issn><eissn>1751-7370</eissn><abstract>The relative importance of size and composition of microbial communities in ecosystem functioning is poorly understood. Here, we investigated how community composition and size of selected functional guilds in the nitrogen cycle correlated with agroecosystem functioning, which was defined as microbial process rates, total crop yield and nitrogen content in the crop. Soil was sampled from a 50-year fertilizer trial and the treatments comprised unfertilized bare fallow, unfertilized with crop, and plots with crop fertilized with calcium nitrate, ammonium sulfate, solid cattle manure or sewage sludge. The size of the functional guilds and the total bacterial community were greatly affected by the fertilization regimes, especially by the sewage sludge and ammonium sulfate treatments. The community size results were combined with previously published data on the composition of the corresponding communities, potential ammonia oxidation, denitrification, basal and substrate-induced respiration rates, in addition to crop yield for an integrated analysis. It was found that differences in size, rather than composition, correlated with differences in process rates for the denitrifier and ammonia-oxidizing archaeal and total bacterial communities, whereas neither differences in size nor composition was correlated with differences in process rates for the ammonia-oxidizing bacterial community. In contrast, the composition of nitrate-reducing, denitrifying and total bacterial communities co-varied with primary production and both were strongly linked to soil properties.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>19148144</pmid><doi>10.1038/ismej.2008.128</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | The ISME Journal, 2009-05, Vol.3 (5), p.597-605 |
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| source | Oxford Journals Open Access Collection; MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals |
| subjects | Agricultural ecosystems Agricultural Science Ammonia Ammonium Archaea - genetics Archaea - growth & development Bacteria Bacteria - genetics Bacteria - growth & development Biomass Biomedical and Life Sciences Calcium Cattle Cattle manure Colony Count, Microbial - methods Community composition Crop yield Crops, Agricultural - chemistry Crops, Agricultural - growth & development Denitrification Ecological function Ecology Ecosystem Ekologi Environmental Sciences related to Agriculture and Land-use Evolutionary Biology Fertilizers Fertilizers - microbiology Jordbruksvetenskap Life Sciences Microbial activity Microbial Ecology Microbial Genetics and Genomics Microbiology Microbiology and Parasitology Mikrobiologi Miljö- och naturvårdsvetenskap Nitrates Nitrogen - metabolism Nitrogen cycle original-article Oxidation Primary production Respiration Sewage sludge Soil Microbiology Soil properties Sulfates |
| title | Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment |
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