The chemical compound ‘Heatin’ stimulates hypocotyl elongation and interferes with the Arabidopsis NIT1‐subfamily of nitrilases

SUMMARY Temperature passively affects biological processes involved in plant growth. Therefore, it is challenging to study the dedicated temperature signalling pathways that orchestrate thermomorphogenesis, a suite of elongation growth‐based adaptations that enhance leaf‐cooling capacity. We screene...

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Veröffentlicht in:The Plant journal : for cell and molecular biology 2021-06, Vol.106 (6), p.1523-1540
Hauptverfasser: Woude, Lennard, Piotrowski, Markus, Klaasse, Gruson, Paulus, Judith K., Krahn, Daniel, Ninck, Sabrina, Kaschani, Farnusch, Kaiser, Markus, Novák, Ondřej, Ljung, Karin, Bulder, Suzanne, Verk, Marcel, Snoek, Basten L., Fiers, Martijn, Martin, Nathaniel I., Hoorn, Renier A. L., Robert, Stéphanie, Smeekens, Sjef, Zanten, Martijn
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container_issue 6
container_start_page 1523
container_title The Plant journal : for cell and molecular biology
container_volume 106
creator Woude, Lennard
Piotrowski, Markus
Klaasse, Gruson
Paulus, Judith K.
Krahn, Daniel
Ninck, Sabrina
Kaschani, Farnusch
Kaiser, Markus
Novák, Ondřej
Ljung, Karin
Bulder, Suzanne
Verk, Marcel
Snoek, Basten L.
Fiers, Martijn
Martin, Nathaniel I.
Hoorn, Renier A. L.
Robert, Stéphanie
Smeekens, Sjef
Zanten, Martijn
description SUMMARY Temperature passively affects biological processes involved in plant growth. Therefore, it is challenging to study the dedicated temperature signalling pathways that orchestrate thermomorphogenesis, a suite of elongation growth‐based adaptations that enhance leaf‐cooling capacity. We screened a chemical library for compounds that restored hypocotyl elongation in the pif4‐2–deficient mutant background at warm temperature conditions in Arabidopsis thaliana to identify modulators of thermomorphogenesis. The small aromatic compound ‘Heatin’, containing 1‐iminomethyl‐2‐naphthol as a pharmacophore, was selected as an enhancer of elongation growth. We show that ARABIDOPSIS ALDEHYDE OXIDASES redundantly contribute to Heatin‐mediated hypocotyl elongation. Following a chemical proteomics approach, the members of the NITRILASE1‐subfamily of auxin biosynthesis enzymes were identified among the molecular targets of Heatin. Our data reveal that nitrilases are involved in promotion of hypocotyl elongation in response to high temperature and Heatin‐mediated hypocotyl elongation requires the NITRILASE1‐subfamily members, NIT1 and NIT2. Heatin inhibits NIT1‐subfamily enzymatic activity in vitro and the application of Heatin accordingly results in the accumulation of NIT1‐subfamily substrate indole‐3‐acetonitrile in vivo. However, levels of the NIT1‐subfamily product, bioactive auxin (indole‐3‐acetic acid), were also significantly increased. It is likely that the stimulation of hypocotyl elongation by Heatin might be independent of its observed interaction with NITRILASE1‐subfamily members. However, nitrilases may contribute to the Heatin response by stimulating indole‐3‐acetic acid biosynthesis in an indirect way. Heatin and its functional analogues present novel chemical entities for studying auxin biology. Significance Statement We identified the chemical compound Heatin that stimulates plant thermomorphogenesis and show that Heatin interferes with NIT1‐subfamily enzymatic activity and results in accumulation of auxin. The precise mechanism of action of Heatin requires further study but the investigations presented can contribute to knowledge‐based engineering of warm temperature‐resilient crops. Heatin is a promising agrochemical to steer plant growth and is a novel chemical tool for studying auxin biology.
doi_str_mv 10.1111/tpj.15250
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L. ; Robert, Stéphanie ; Smeekens, Sjef ; Zanten, Martijn</creator><creatorcontrib>Woude, Lennard ; Piotrowski, Markus ; Klaasse, Gruson ; Paulus, Judith K. ; Krahn, Daniel ; Ninck, Sabrina ; Kaschani, Farnusch ; Kaiser, Markus ; Novák, Ondřej ; Ljung, Karin ; Bulder, Suzanne ; Verk, Marcel ; Snoek, Basten L. ; Fiers, Martijn ; Martin, Nathaniel I. ; Hoorn, Renier A. L. ; Robert, Stéphanie ; Smeekens, Sjef ; Zanten, Martijn ; Sveriges lantbruksuniversitet</creatorcontrib><description>SUMMARY Temperature passively affects biological processes involved in plant growth. Therefore, it is challenging to study the dedicated temperature signalling pathways that orchestrate thermomorphogenesis, a suite of elongation growth‐based adaptations that enhance leaf‐cooling capacity. We screened a chemical library for compounds that restored hypocotyl elongation in the pif4‐2–deficient mutant background at warm temperature conditions in Arabidopsis thaliana to identify modulators of thermomorphogenesis. The small aromatic compound ‘Heatin’, containing 1‐iminomethyl‐2‐naphthol as a pharmacophore, was selected as an enhancer of elongation growth. We show that ARABIDOPSIS ALDEHYDE OXIDASES redundantly contribute to Heatin‐mediated hypocotyl elongation. Following a chemical proteomics approach, the members of the NITRILASE1‐subfamily of auxin biosynthesis enzymes were identified among the molecular targets of Heatin. Our data reveal that nitrilases are involved in promotion of hypocotyl elongation in response to high temperature and Heatin‐mediated hypocotyl elongation requires the NITRILASE1‐subfamily members, NIT1 and NIT2. Heatin inhibits NIT1‐subfamily enzymatic activity in vitro and the application of Heatin accordingly results in the accumulation of NIT1‐subfamily substrate indole‐3‐acetonitrile in vivo. However, levels of the NIT1‐subfamily product, bioactive auxin (indole‐3‐acetic acid), were also significantly increased. It is likely that the stimulation of hypocotyl elongation by Heatin might be independent of its observed interaction with NITRILASE1‐subfamily members. However, nitrilases may contribute to the Heatin response by stimulating indole‐3‐acetic acid biosynthesis in an indirect way. Heatin and its functional analogues present novel chemical entities for studying auxin biology. Significance Statement We identified the chemical compound Heatin that stimulates plant thermomorphogenesis and show that Heatin interferes with NIT1‐subfamily enzymatic activity and results in accumulation of auxin. The precise mechanism of action of Heatin requires further study but the investigations presented can contribute to knowledge‐based engineering of warm temperature‐resilient crops. Heatin is a promising agrochemical to steer plant growth and is a novel chemical tool for studying auxin biology.</description><identifier>ISSN: 0960-7412</identifier><identifier>ISSN: 1365-313X</identifier><identifier>EISSN: 1365-313X</identifier><identifier>DOI: 10.1111/tpj.15250</identifier><identifier>PMID: 33768644</identifier><language>eng</language><publisher>England: Blackwell Publishing Ltd</publisher><subject>1‐iminomethyl‐2‐naphthol ; Acetic acid ; Acetonitrile ; Adaptation ; aldehyde oxidase ; Aldehyde Oxidase - genetics ; Aldehyde Oxidase - metabolism ; Aldehydes ; Aminohydrolases - genetics ; Aminohydrolases - metabolism ; Apomorphine - analogs &amp; derivatives ; Apomorphine - pharmacology ; Arabidopsis ; Arabidopsis - drug effects ; Arabidopsis - growth &amp; development ; Arabidopsis Proteins - genetics ; Arabidopsis Proteins - metabolism ; Aromatic compounds ; Auxins ; Biological activity ; Biosynthesis ; Chemical compounds ; chemical genetics ; Deficient mutant ; Elongation ; Enzymatic activity ; Enzyme Inhibitors - administration &amp; dosage ; Enzyme Inhibitors - chemistry ; Enzyme Inhibitors - pharmacology ; Gene Expression Regulation, Plant - drug effects ; Genetics ; Genetik ; Heatin ; Herbicides - pharmacology ; High temperature ; Hypocotyl - drug effects ; Hypocotyl - growth &amp; development ; IAN ; Indole-3-acetonitrile ; Indoleacetic acid ; Indoleacetic Acids ; Modulators ; Molecular Structure ; Naphthol ; NIT1‐subfamily ; nitrilases ; Original ; Picloram - pharmacology ; PIF4 ; Plant growth ; Proteomics ; Signal transduction ; Structure-Activity Relationship ; Substrates ; Target recognition ; Temperature requirements ; thermomorphogenesis ; Transcriptome - drug effects</subject><ispartof>The Plant journal : for cell and molecular biology, 2021-06, Vol.106 (6), p.1523-1540</ispartof><rights>2021 The Authors. published by Society for Experimental Biology and John Wiley &amp; Sons Ltd.</rights><rights>2021 The Authors. The Plant Journal published by Society for Experimental Biology and John Wiley &amp; Sons Ltd.</rights><rights>2021. This article is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). 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The small aromatic compound ‘Heatin’, containing 1‐iminomethyl‐2‐naphthol as a pharmacophore, was selected as an enhancer of elongation growth. We show that ARABIDOPSIS ALDEHYDE OXIDASES redundantly contribute to Heatin‐mediated hypocotyl elongation. Following a chemical proteomics approach, the members of the NITRILASE1‐subfamily of auxin biosynthesis enzymes were identified among the molecular targets of Heatin. Our data reveal that nitrilases are involved in promotion of hypocotyl elongation in response to high temperature and Heatin‐mediated hypocotyl elongation requires the NITRILASE1‐subfamily members, NIT1 and NIT2. Heatin inhibits NIT1‐subfamily enzymatic activity in vitro and the application of Heatin accordingly results in the accumulation of NIT1‐subfamily substrate indole‐3‐acetonitrile in vivo. However, levels of the NIT1‐subfamily product, bioactive auxin (indole‐3‐acetic acid), were also significantly increased. It is likely that the stimulation of hypocotyl elongation by Heatin might be independent of its observed interaction with NITRILASE1‐subfamily members. However, nitrilases may contribute to the Heatin response by stimulating indole‐3‐acetic acid biosynthesis in an indirect way. Heatin and its functional analogues present novel chemical entities for studying auxin biology. Significance Statement We identified the chemical compound Heatin that stimulates plant thermomorphogenesis and show that Heatin interferes with NIT1‐subfamily enzymatic activity and results in accumulation of auxin. The precise mechanism of action of Heatin requires further study but the investigations presented can contribute to knowledge‐based engineering of warm temperature‐resilient crops. Heatin is a promising agrochemical to steer plant growth and is a novel chemical tool for studying auxin biology.</description><subject>1‐iminomethyl‐2‐naphthol</subject><subject>Acetic acid</subject><subject>Acetonitrile</subject><subject>Adaptation</subject><subject>aldehyde oxidase</subject><subject>Aldehyde Oxidase - genetics</subject><subject>Aldehyde Oxidase - metabolism</subject><subject>Aldehydes</subject><subject>Aminohydrolases - genetics</subject><subject>Aminohydrolases - metabolism</subject><subject>Apomorphine - analogs &amp; derivatives</subject><subject>Apomorphine - pharmacology</subject><subject>Arabidopsis</subject><subject>Arabidopsis - drug effects</subject><subject>Arabidopsis - growth &amp; development</subject><subject>Arabidopsis Proteins - genetics</subject><subject>Arabidopsis Proteins - metabolism</subject><subject>Aromatic compounds</subject><subject>Auxins</subject><subject>Biological activity</subject><subject>Biosynthesis</subject><subject>Chemical compounds</subject><subject>chemical genetics</subject><subject>Deficient mutant</subject><subject>Elongation</subject><subject>Enzymatic activity</subject><subject>Enzyme Inhibitors - administration &amp; dosage</subject><subject>Enzyme Inhibitors - chemistry</subject><subject>Enzyme Inhibitors - pharmacology</subject><subject>Gene Expression Regulation, Plant - drug effects</subject><subject>Genetics</subject><subject>Genetik</subject><subject>Heatin</subject><subject>Herbicides - pharmacology</subject><subject>High temperature</subject><subject>Hypocotyl - drug effects</subject><subject>Hypocotyl - growth &amp; development</subject><subject>IAN</subject><subject>Indole-3-acetonitrile</subject><subject>Indoleacetic acid</subject><subject>Indoleacetic Acids</subject><subject>Modulators</subject><subject>Molecular Structure</subject><subject>Naphthol</subject><subject>NIT1‐subfamily</subject><subject>nitrilases</subject><subject>Original</subject><subject>Picloram - pharmacology</subject><subject>PIF4</subject><subject>Plant growth</subject><subject>Proteomics</subject><subject>Signal transduction</subject><subject>Structure-Activity Relationship</subject><subject>Substrates</subject><subject>Target recognition</subject><subject>Temperature requirements</subject><subject>thermomorphogenesis</subject><subject>Transcriptome - drug effects</subject><issn>0960-7412</issn><issn>1365-313X</issn><issn>1365-313X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>EIF</sourceid><sourceid>D8T</sourceid><recordid>eNp1kT9v1DAYhy0Eokdh4AsgS0wMufpfHGdBqiqgRRUwHBKb5ThO41MSB9vhlO0Wdkb4evdJ8JFS0QEv7-Dn9_h9_QLwHKM1Tucsjts1zkmOHoAVpjzPKKZfHoIVKjnKCobJCXgSwhYhXFDOHoMTSgsuOGMr8H3TGqhb01utOqhdP7ppqOFh__PSqGiHw_4XDNH2U6eiCbCdR6ddnDtoOjfcJMINUKWAHaLxjfGJ2dnYwpi0515VtnZjsAF-uNrgw_5HmKpG9baboWvgYKO3nQomPAWPGtUF8-y2noLPb99sLi6z64_vri7OrzPNBEFZKTRNeV7mFSNM1ZRrprGo6wZTZQzmqqwIEogQ1jSiFgyVCJmC60IYpBmip2C9eMPOjFMlR2975WfplJWhmyrlj0UGI9O3iqJIgddLING9qbUZolfdvdz9m8G28sZ9k4JyhPOj4OWtwLuvkwlRbt3khzSkJHnOCCrygiTq1UJp70Lwprl7AaNjK1imFcs_K07si39buiP_7jQBZwuws52Z_2-Sm0_vF-Vvz_63lg</recordid><startdate>202106</startdate><enddate>202106</enddate><creator>Woude, Lennard</creator><creator>Piotrowski, Markus</creator><creator>Klaasse, Gruson</creator><creator>Paulus, Judith K.</creator><creator>Krahn, Daniel</creator><creator>Ninck, Sabrina</creator><creator>Kaschani, Farnusch</creator><creator>Kaiser, Markus</creator><creator>Novák, Ondřej</creator><creator>Ljung, Karin</creator><creator>Bulder, Suzanne</creator><creator>Verk, Marcel</creator><creator>Snoek, Basten L.</creator><creator>Fiers, Martijn</creator><creator>Martin, Nathaniel I.</creator><creator>Hoorn, Renier A. 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L.</au><au>Robert, Stéphanie</au><au>Smeekens, Sjef</au><au>Zanten, Martijn</au><aucorp>Sveriges lantbruksuniversitet</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The chemical compound ‘Heatin’ stimulates hypocotyl elongation and interferes with the Arabidopsis NIT1‐subfamily of nitrilases</atitle><jtitle>The Plant journal : for cell and molecular biology</jtitle><addtitle>Plant J</addtitle><date>2021-06</date><risdate>2021</risdate><volume>106</volume><issue>6</issue><spage>1523</spage><epage>1540</epage><pages>1523-1540</pages><issn>0960-7412</issn><issn>1365-313X</issn><eissn>1365-313X</eissn><abstract>SUMMARY Temperature passively affects biological processes involved in plant growth. Therefore, it is challenging to study the dedicated temperature signalling pathways that orchestrate thermomorphogenesis, a suite of elongation growth‐based adaptations that enhance leaf‐cooling capacity. We screened a chemical library for compounds that restored hypocotyl elongation in the pif4‐2–deficient mutant background at warm temperature conditions in Arabidopsis thaliana to identify modulators of thermomorphogenesis. The small aromatic compound ‘Heatin’, containing 1‐iminomethyl‐2‐naphthol as a pharmacophore, was selected as an enhancer of elongation growth. We show that ARABIDOPSIS ALDEHYDE OXIDASES redundantly contribute to Heatin‐mediated hypocotyl elongation. Following a chemical proteomics approach, the members of the NITRILASE1‐subfamily of auxin biosynthesis enzymes were identified among the molecular targets of Heatin. Our data reveal that nitrilases are involved in promotion of hypocotyl elongation in response to high temperature and Heatin‐mediated hypocotyl elongation requires the NITRILASE1‐subfamily members, NIT1 and NIT2. Heatin inhibits NIT1‐subfamily enzymatic activity in vitro and the application of Heatin accordingly results in the accumulation of NIT1‐subfamily substrate indole‐3‐acetonitrile in vivo. However, levels of the NIT1‐subfamily product, bioactive auxin (indole‐3‐acetic acid), were also significantly increased. It is likely that the stimulation of hypocotyl elongation by Heatin might be independent of its observed interaction with NITRILASE1‐subfamily members. However, nitrilases may contribute to the Heatin response by stimulating indole‐3‐acetic acid biosynthesis in an indirect way. Heatin and its functional analogues present novel chemical entities for studying auxin biology. Significance Statement We identified the chemical compound Heatin that stimulates plant thermomorphogenesis and show that Heatin interferes with NIT1‐subfamily enzymatic activity and results in accumulation of auxin. The precise mechanism of action of Heatin requires further study but the investigations presented can contribute to knowledge‐based engineering of warm temperature‐resilient crops. Heatin is a promising agrochemical to steer plant growth and is a novel chemical tool for studying auxin biology.</abstract><cop>England</cop><pub>Blackwell Publishing Ltd</pub><pmid>33768644</pmid><doi>10.1111/tpj.15250</doi><tpages>18</tpages><orcidid>https://orcid.org/0000-0002-2810-7374</orcidid><oa>free_for_read</oa></addata></record>
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identifier ISSN: 0960-7412
ispartof The Plant journal : for cell and molecular biology, 2021-06, Vol.106 (6), p.1523-1540
issn 0960-7412
1365-313X
1365-313X
language eng
recordid cdi_swepub_primary_oai_slubar_slu_se_111877
source MEDLINE; Wiley Journals; SWEPUB Freely available online; IngentaConnect Free/Open Access Journals; EZB-FREE-00999 freely available EZB journals; Wiley Online Library (Open Access Collection)
subjects 1‐iminomethyl‐2‐naphthol
Acetic acid
Acetonitrile
Adaptation
aldehyde oxidase
Aldehyde Oxidase - genetics
Aldehyde Oxidase - metabolism
Aldehydes
Aminohydrolases - genetics
Aminohydrolases - metabolism
Apomorphine - analogs & derivatives
Apomorphine - pharmacology
Arabidopsis
Arabidopsis - drug effects
Arabidopsis - growth & development
Arabidopsis Proteins - genetics
Arabidopsis Proteins - metabolism
Aromatic compounds
Auxins
Biological activity
Biosynthesis
Chemical compounds
chemical genetics
Deficient mutant
Elongation
Enzymatic activity
Enzyme Inhibitors - administration & dosage
Enzyme Inhibitors - chemistry
Enzyme Inhibitors - pharmacology
Gene Expression Regulation, Plant - drug effects
Genetics
Genetik
Heatin
Herbicides - pharmacology
High temperature
Hypocotyl - drug effects
Hypocotyl - growth & development
IAN
Indole-3-acetonitrile
Indoleacetic acid
Indoleacetic Acids
Modulators
Molecular Structure
Naphthol
NIT1‐subfamily
nitrilases
Original
Picloram - pharmacology
PIF4
Plant growth
Proteomics
Signal transduction
Structure-Activity Relationship
Substrates
Target recognition
Temperature requirements
thermomorphogenesis
Transcriptome - drug effects
title The chemical compound ‘Heatin’ stimulates hypocotyl elongation and interferes with the Arabidopsis NIT1‐subfamily of nitrilases
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