Solvent effects on the π shape resonances of uracil
We have investigated the effect of microsolvation on the π* shape resonances of uracil, referred to as π1* and π2* in the order of increasing energy. Our study considered uracil–water aggregates with six solvent molecules obtained from Monte Carlo simulations in the liquid phase. To explore the ense...
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creator | Cornetta, L. M. Coutinho, K. Varella, M. T. do N. |
description | We have investigated the effect of microsolvation on the π* shape resonances of uracil, referred to as π1* and π2* in the order of increasing energy. Our study considered uracil–water aggregates with six solvent molecules obtained from Monte Carlo simulations in the liquid phase. To explore the ensemble statistics, we combined scattering calculations, performed in the static exchange and static exchange plus polarization approximations, with linear regressions of virtual orbital energies to the scattering results. In general, the solvent molecules stabilize the anion states, and the lower lying π1* resonance becomes a bound state in most of the solute–water clusters. We also discuss how the strength of the H bonds can affect the energies of the anion states, in addition to the number and donor/acceptor characters of those bonds. The thermal distributions for the vertical attachment energies, obtained from 133 statistically uncorrelated solute–solvent clusters, are significantly broad in the energy scale of the autoionization widths. The distributions for the π1* and π2* anion states slightly overlap, thus giving rise to a quasi-continuum of attachment energies below ≲2.5 eV, in contrast to the gas phase picture of electron attachment to well separated resonances below the electronic excitation threshold. Both the stabilization of the anion states and the spread of attachment energies could be expected to favor the dissociative electron attachment processes believed to underlie the electron-induced damage to biomolecules. |
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M. ; Coutinho, K. ; Varella, M. T. do N.</creator><creatorcontrib>Cornetta, L. M. ; Coutinho, K. ; Varella, M. T. do N.</creatorcontrib><description>We have investigated the effect of microsolvation on the π* shape resonances of uracil, referred to as π1* and π2* in the order of increasing energy. Our study considered uracil–water aggregates with six solvent molecules obtained from Monte Carlo simulations in the liquid phase. To explore the ensemble statistics, we combined scattering calculations, performed in the static exchange and static exchange plus polarization approximations, with linear regressions of virtual orbital energies to the scattering results. In general, the solvent molecules stabilize the anion states, and the lower lying π1* resonance becomes a bound state in most of the solute–water clusters. We also discuss how the strength of the H bonds can affect the energies of the anion states, in addition to the number and donor/acceptor characters of those bonds. The thermal distributions for the vertical attachment energies, obtained from 133 statistically uncorrelated solute–solvent clusters, are significantly broad in the energy scale of the autoionization widths. The distributions for the π1* and π2* anion states slightly overlap, thus giving rise to a quasi-continuum of attachment energies below ≲2.5 eV, in contrast to the gas phase picture of electron attachment to well separated resonances below the electronic excitation threshold. Both the stabilization of the anion states and the spread of attachment energies could be expected to favor the dissociative electron attachment processes believed to underlie the electron-induced damage to biomolecules.</description><identifier>ISSN: 0021-9606</identifier><identifier>EISSN: 1089-7690</identifier><identifier>DOI: 10.1063/1.5139459</identifier><identifier>PMID: 32113371</identifier><identifier>CODEN: JCPSA6</identifier><language>eng</language><publisher>United States: American Institute of Physics</publisher><subject>Anions ; Autoionization ; Biomolecules ; Bonding strength ; Clusters ; Computer simulation ; Electron attachment ; Electrons ; Exchanging ; Ions ; Liquid phases ; Physics ; Scattering ; Shape effects ; Solvent effect ; Solvents ; Uracil ; Vapor phases</subject><ispartof>The Journal of chemical physics, 2020-02, Vol.152 (8), p.084301-084301</ispartof><rights>Author(s)</rights><rights>2020 Author(s). 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M.</creatorcontrib><creatorcontrib>Coutinho, K.</creatorcontrib><creatorcontrib>Varella, M. T. do N.</creatorcontrib><title>Solvent effects on the π shape resonances of uracil</title><title>The Journal of chemical physics</title><addtitle>J Chem Phys</addtitle><description>We have investigated the effect of microsolvation on the π* shape resonances of uracil, referred to as π1* and π2* in the order of increasing energy. Our study considered uracil–water aggregates with six solvent molecules obtained from Monte Carlo simulations in the liquid phase. To explore the ensemble statistics, we combined scattering calculations, performed in the static exchange and static exchange plus polarization approximations, with linear regressions of virtual orbital energies to the scattering results. In general, the solvent molecules stabilize the anion states, and the lower lying π1* resonance becomes a bound state in most of the solute–water clusters. We also discuss how the strength of the H bonds can affect the energies of the anion states, in addition to the number and donor/acceptor characters of those bonds. The thermal distributions for the vertical attachment energies, obtained from 133 statistically uncorrelated solute–solvent clusters, are significantly broad in the energy scale of the autoionization widths. The distributions for the π1* and π2* anion states slightly overlap, thus giving rise to a quasi-continuum of attachment energies below ≲2.5 eV, in contrast to the gas phase picture of electron attachment to well separated resonances below the electronic excitation threshold. Both the stabilization of the anion states and the spread of attachment energies could be expected to favor the dissociative electron attachment processes believed to underlie the electron-induced damage to biomolecules.</description><subject>Anions</subject><subject>Autoionization</subject><subject>Biomolecules</subject><subject>Bonding strength</subject><subject>Clusters</subject><subject>Computer simulation</subject><subject>Electron attachment</subject><subject>Electrons</subject><subject>Exchanging</subject><subject>Ions</subject><subject>Liquid phases</subject><subject>Physics</subject><subject>Scattering</subject><subject>Shape effects</subject><subject>Solvent effect</subject><subject>Solvents</subject><subject>Uracil</subject><subject>Vapor phases</subject><issn>0021-9606</issn><issn>1089-7690</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp90L9OwzAQBnALgWgpDLwAisQCSCk-24ntEVX8kyoxAHPkOBc1VRoX20Fi4w15JVK1MDAw3XA_fXf6CDkFOgWa82uYZsC1yPQeGQNVOpW5pvtkTCmDVOc0H5GjEJaUUpBMHJIRZwCcSxgT8ezad-xignWNNobEdUlcYPL1mYSFWWPiMbjOdBaHVZ303timPSYHtWkDnuzmhLze3b7MHtL50_3j7GaeWi5UTLFUWoAWVWl1poUZDggualBlpVUlBNdUClFyK41BaUFKrKHKOMsErUpp-YRcbHPX3r31GGKxaoLFtjUduj4UjOdaKUYVHej5H7p0ve-G7zaKCQkZsEFdbpX1LgSPdbH2zcr4jwJosamygGJX5WDPdol9ucLqV_50N4CrLQi2iSY2rvsn7Ru_L3lD</recordid><startdate>20200228</startdate><enddate>20200228</enddate><creator>Cornetta, L. M.</creator><creator>Coutinho, K.</creator><creator>Varella, M. T. do N.</creator><general>American Institute of Physics</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>H8D</scope><scope>L7M</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-5812-0342</orcidid><orcidid>https://orcid.org/0000-0001-7597-8327</orcidid><orcidid>https://orcid.org/0000-0002-7586-3324</orcidid><orcidid>https://orcid.org/0000000258120342</orcidid><orcidid>https://orcid.org/0000000275863324</orcidid><orcidid>https://orcid.org/0000000175978327</orcidid></search><sort><creationdate>20200228</creationdate><title>Solvent effects on the π shape resonances of uracil</title><author>Cornetta, L. M. ; Coutinho, K. ; Varella, M. T. do N.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c348t-eb894194dbc9594afec434f18bd98d44390744b3c7aae7c177ef1d532540db7c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Anions</topic><topic>Autoionization</topic><topic>Biomolecules</topic><topic>Bonding strength</topic><topic>Clusters</topic><topic>Computer simulation</topic><topic>Electron attachment</topic><topic>Electrons</topic><topic>Exchanging</topic><topic>Ions</topic><topic>Liquid phases</topic><topic>Physics</topic><topic>Scattering</topic><topic>Shape effects</topic><topic>Solvent effect</topic><topic>Solvents</topic><topic>Uracil</topic><topic>Vapor phases</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cornetta, L. M.</creatorcontrib><creatorcontrib>Coutinho, K.</creatorcontrib><creatorcontrib>Varella, M. T. do N.</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Aerospace Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><jtitle>The Journal of chemical physics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cornetta, L. M.</au><au>Coutinho, K.</au><au>Varella, M. T. do N.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Solvent effects on the π shape resonances of uracil</atitle><jtitle>The Journal of chemical physics</jtitle><addtitle>J Chem Phys</addtitle><date>2020-02-28</date><risdate>2020</risdate><volume>152</volume><issue>8</issue><spage>084301</spage><epage>084301</epage><pages>084301-084301</pages><issn>0021-9606</issn><eissn>1089-7690</eissn><coden>JCPSA6</coden><abstract>We have investigated the effect of microsolvation on the π* shape resonances of uracil, referred to as π1* and π2* in the order of increasing energy. Our study considered uracil–water aggregates with six solvent molecules obtained from Monte Carlo simulations in the liquid phase. To explore the ensemble statistics, we combined scattering calculations, performed in the static exchange and static exchange plus polarization approximations, with linear regressions of virtual orbital energies to the scattering results. In general, the solvent molecules stabilize the anion states, and the lower lying π1* resonance becomes a bound state in most of the solute–water clusters. We also discuss how the strength of the H bonds can affect the energies of the anion states, in addition to the number and donor/acceptor characters of those bonds. The thermal distributions for the vertical attachment energies, obtained from 133 statistically uncorrelated solute–solvent clusters, are significantly broad in the energy scale of the autoionization widths. The distributions for the π1* and π2* anion states slightly overlap, thus giving rise to a quasi-continuum of attachment energies below ≲2.5 eV, in contrast to the gas phase picture of electron attachment to well separated resonances below the electronic excitation threshold. Both the stabilization of the anion states and the spread of attachment energies could be expected to favor the dissociative electron attachment processes believed to underlie the electron-induced damage to biomolecules.</abstract><cop>United States</cop><pub>American Institute of Physics</pub><pmid>32113371</pmid><doi>10.1063/1.5139459</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0002-5812-0342</orcidid><orcidid>https://orcid.org/0000-0001-7597-8327</orcidid><orcidid>https://orcid.org/0000-0002-7586-3324</orcidid><orcidid>https://orcid.org/0000000258120342</orcidid><orcidid>https://orcid.org/0000000275863324</orcidid><orcidid>https://orcid.org/0000000175978327</orcidid></addata></record> |
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subjects | Anions Autoionization Biomolecules Bonding strength Clusters Computer simulation Electron attachment Electrons Exchanging Ions Liquid phases Physics Scattering Shape effects Solvent effect Solvents Uracil Vapor phases |
title | Solvent effects on the π shape resonances of uracil |
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