Automated serial dilutions for high-dynamic-range assays enabled by fill-level-coupled valving in centrifugal microfluidics
We introduce a new concept for centrifugal microfluidics that enables fully automated serial dilution generation without any additional means besides temperature control. The key feature is time-independent, serial valving of mixing chambers by fill-level-coupled temperature change rate (FLC-TCR) ac...
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Veröffentlicht in: | Lab on a chip 2019-06, Vol.19 (13), p.225-2219 |
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creator | Juelg, Peter Specht, Mara Kipf, Elena Lehnert, Michael Eckert, Cornelia Keller, Mark Hutzenlaub, Tobias von Stetten, Felix Zengerle, Roland Paust, Nils |
description | We introduce a new concept for centrifugal microfluidics that enables fully automated serial dilution generation without any additional means besides temperature control. The key feature is time-independent, serial valving of mixing chambers by fill-level-coupled temperature change rate (FLC-TCR) actuated valving. The automated dilution is realized under continuous rotation which enables reliable control of wetting liquids without the need for any additional fabrication steps such as hydrophobic coating. All fluidic features are implemented in a monolithic fashion and disks are manufactured by foil thermoforming for scalable manufacturing. The new valving concept is demonstrated to reliably prevent valving if the diluted sample is not added to the mixing chamber (
n
= 30) and ensure valving if the dilution stage is completed (
n
= 15). The accuracy and precision of automated serial dilutions are verified by on-disk generation of qPCR standard curve dilutions and compared with manually generated reference dilutions. In a first step, the 5-log-stage standard curves are evaluated in a commercial qPCR thermocycler revealing a linearity of
R
2
≥ 99.92% for the proposed LabDisk method
vs. R
2
≥ 99.67% in manual reference dilutions. In a second step, the disk automated serial dilutions are combined with on-disk qPCR thermocycling and readout, both inside a LabDisk player. A 4-log-stage linearity of
R
2
≥ 99.81% and a sensitivity of one leukemia associated
ETV6-RUNX1
mutant DNA copy in a background of 100 000 wild-type DNA copies are achieved.
Time-independent, serial valving under rotation on centrifugal microfluidic platforms by a fill-level-coupled temperature change rate (FLC-TCR) actuated principle. |
doi_str_mv | 10.1039/c9lc00092e |
format | Article |
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n
= 30) and ensure valving if the dilution stage is completed (
n
= 15). The accuracy and precision of automated serial dilutions are verified by on-disk generation of qPCR standard curve dilutions and compared with manually generated reference dilutions. In a first step, the 5-log-stage standard curves are evaluated in a commercial qPCR thermocycler revealing a linearity of
R
2
≥ 99.92% for the proposed LabDisk method
vs. R
2
≥ 99.67% in manual reference dilutions. In a second step, the disk automated serial dilutions are combined with on-disk qPCR thermocycling and readout, both inside a LabDisk player. A 4-log-stage linearity of
R
2
≥ 99.81% and a sensitivity of one leukemia associated
ETV6-RUNX1
mutant DNA copy in a background of 100 000 wild-type DNA copies are achieved.
Time-independent, serial valving under rotation on centrifugal microfluidic platforms by a fill-level-coupled temperature change rate (FLC-TCR) actuated principle.</description><identifier>ISSN: 1473-0197</identifier><identifier>EISSN: 1473-0189</identifier><identifier>DOI: 10.1039/c9lc00092e</identifier><identifier>PMID: 31139783</identifier><language>eng</language><publisher>England: Royal Society of Chemistry</publisher><subject>Automation ; Dilution ; Disks ; Foils ; Linearity ; Microfluidics ; Temperature control ; Thermal cycling ; Thermoforming ; Wetting</subject><ispartof>Lab on a chip, 2019-06, Vol.19 (13), p.225-2219</ispartof><rights>Copyright Royal Society of Chemistry 2019</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c415t-a8d9aeda8fe3eaddd73ab7271318295bc409bbae7a50e5cc4d00160b55f3e7303</citedby><cites>FETCH-LOGICAL-c415t-a8d9aeda8fe3eaddd73ab7271318295bc409bbae7a50e5cc4d00160b55f3e7303</cites><orcidid>0000-0003-1448-9831 ; 0000-0002-9769-391X ; 0000-0002-7602-0484</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31139783$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Juelg, Peter</creatorcontrib><creatorcontrib>Specht, Mara</creatorcontrib><creatorcontrib>Kipf, Elena</creatorcontrib><creatorcontrib>Lehnert, Michael</creatorcontrib><creatorcontrib>Eckert, Cornelia</creatorcontrib><creatorcontrib>Keller, Mark</creatorcontrib><creatorcontrib>Hutzenlaub, Tobias</creatorcontrib><creatorcontrib>von Stetten, Felix</creatorcontrib><creatorcontrib>Zengerle, Roland</creatorcontrib><creatorcontrib>Paust, Nils</creatorcontrib><title>Automated serial dilutions for high-dynamic-range assays enabled by fill-level-coupled valving in centrifugal microfluidics</title><title>Lab on a chip</title><addtitle>Lab Chip</addtitle><description>We introduce a new concept for centrifugal microfluidics that enables fully automated serial dilution generation without any additional means besides temperature control. The key feature is time-independent, serial valving of mixing chambers by fill-level-coupled temperature change rate (FLC-TCR) actuated valving. The automated dilution is realized under continuous rotation which enables reliable control of wetting liquids without the need for any additional fabrication steps such as hydrophobic coating. All fluidic features are implemented in a monolithic fashion and disks are manufactured by foil thermoforming for scalable manufacturing. The new valving concept is demonstrated to reliably prevent valving if the diluted sample is not added to the mixing chamber (
n
= 30) and ensure valving if the dilution stage is completed (
n
= 15). The accuracy and precision of automated serial dilutions are verified by on-disk generation of qPCR standard curve dilutions and compared with manually generated reference dilutions. In a first step, the 5-log-stage standard curves are evaluated in a commercial qPCR thermocycler revealing a linearity of
R
2
≥ 99.92% for the proposed LabDisk method
vs. R
2
≥ 99.67% in manual reference dilutions. In a second step, the disk automated serial dilutions are combined with on-disk qPCR thermocycling and readout, both inside a LabDisk player. A 4-log-stage linearity of
R
2
≥ 99.81% and a sensitivity of one leukemia associated
ETV6-RUNX1
mutant DNA copy in a background of 100 000 wild-type DNA copies are achieved.
Time-independent, serial valving under rotation on centrifugal microfluidic platforms by a fill-level-coupled temperature change rate (FLC-TCR) actuated principle.</description><subject>Automation</subject><subject>Dilution</subject><subject>Disks</subject><subject>Foils</subject><subject>Linearity</subject><subject>Microfluidics</subject><subject>Temperature control</subject><subject>Thermal cycling</subject><subject>Thermoforming</subject><subject>Wetting</subject><issn>1473-0197</issn><issn>1473-0189</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNpd0c1r2zAYBnAxVpp-XXbfEOxSBm4ly46sYwjZVgj00p3Na-l1qiDLmWQFwv75qkuXQU8S0k8PenkI-cTZHWdC3WvlNGNMlfiBXPBKioLxRn087ZWckcsYt4zxupo352QmOBdKNuKC_FmkaRxgQkMjBguOGuvSZEcfaT8G-mw3z4U5eBisLgL4DVKIEQ6RoofO5WfdgfbWucLhHl2hx7R7Pd2D21u_odZTjX4Ktk-bHJ5Twti7ZI3V8Zqc9eAi3rytV-TX99XT8mexfvzxsFysC13xeiqgMQrQQNOjQDDGSAGdLCUXvClV3emKqa4DlFAzrLWuTB50zrq67gVKwcQVuT3m7sL4O2Gc2sFGjc6BxzHFtixzUlWpucj06zu6HVPw-XdZVfMspayz-nZUeZgYA_btLtgBwqHlrH2tpF2q9fJvJauMv7xFpm5Ac6L_Osjg8xGEqE-3_zsVL60Tkso</recordid><startdate>20190625</startdate><enddate>20190625</enddate><creator>Juelg, Peter</creator><creator>Specht, Mara</creator><creator>Kipf, Elena</creator><creator>Lehnert, Michael</creator><creator>Eckert, Cornelia</creator><creator>Keller, Mark</creator><creator>Hutzenlaub, Tobias</creator><creator>von Stetten, Felix</creator><creator>Zengerle, Roland</creator><creator>Paust, Nils</creator><general>Royal Society of Chemistry</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SP</scope><scope>7TB</scope><scope>7U5</scope><scope>8FD</scope><scope>FR3</scope><scope>L7M</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-1448-9831</orcidid><orcidid>https://orcid.org/0000-0002-9769-391X</orcidid><orcidid>https://orcid.org/0000-0002-7602-0484</orcidid></search><sort><creationdate>20190625</creationdate><title>Automated serial dilutions for high-dynamic-range assays enabled by fill-level-coupled valving in centrifugal microfluidics</title><author>Juelg, Peter ; Specht, Mara ; Kipf, Elena ; Lehnert, Michael ; Eckert, Cornelia ; Keller, Mark ; Hutzenlaub, Tobias ; von Stetten, Felix ; Zengerle, Roland ; Paust, Nils</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c415t-a8d9aeda8fe3eaddd73ab7271318295bc409bbae7a50e5cc4d00160b55f3e7303</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Automation</topic><topic>Dilution</topic><topic>Disks</topic><topic>Foils</topic><topic>Linearity</topic><topic>Microfluidics</topic><topic>Temperature control</topic><topic>Thermal cycling</topic><topic>Thermoforming</topic><topic>Wetting</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Juelg, Peter</creatorcontrib><creatorcontrib>Specht, Mara</creatorcontrib><creatorcontrib>Kipf, Elena</creatorcontrib><creatorcontrib>Lehnert, Michael</creatorcontrib><creatorcontrib>Eckert, Cornelia</creatorcontrib><creatorcontrib>Keller, Mark</creatorcontrib><creatorcontrib>Hutzenlaub, Tobias</creatorcontrib><creatorcontrib>von Stetten, Felix</creatorcontrib><creatorcontrib>Zengerle, Roland</creatorcontrib><creatorcontrib>Paust, Nils</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Electronics & Communications Abstracts</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><jtitle>Lab on a chip</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Juelg, Peter</au><au>Specht, Mara</au><au>Kipf, Elena</au><au>Lehnert, Michael</au><au>Eckert, Cornelia</au><au>Keller, Mark</au><au>Hutzenlaub, Tobias</au><au>von Stetten, Felix</au><au>Zengerle, Roland</au><au>Paust, Nils</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Automated serial dilutions for high-dynamic-range assays enabled by fill-level-coupled valving in centrifugal microfluidics</atitle><jtitle>Lab on a chip</jtitle><addtitle>Lab Chip</addtitle><date>2019-06-25</date><risdate>2019</risdate><volume>19</volume><issue>13</issue><spage>225</spage><epage>2219</epage><pages>225-2219</pages><issn>1473-0197</issn><eissn>1473-0189</eissn><abstract>We introduce a new concept for centrifugal microfluidics that enables fully automated serial dilution generation without any additional means besides temperature control. The key feature is time-independent, serial valving of mixing chambers by fill-level-coupled temperature change rate (FLC-TCR) actuated valving. The automated dilution is realized under continuous rotation which enables reliable control of wetting liquids without the need for any additional fabrication steps such as hydrophobic coating. All fluidic features are implemented in a monolithic fashion and disks are manufactured by foil thermoforming for scalable manufacturing. The new valving concept is demonstrated to reliably prevent valving if the diluted sample is not added to the mixing chamber (
n
= 30) and ensure valving if the dilution stage is completed (
n
= 15). The accuracy and precision of automated serial dilutions are verified by on-disk generation of qPCR standard curve dilutions and compared with manually generated reference dilutions. In a first step, the 5-log-stage standard curves are evaluated in a commercial qPCR thermocycler revealing a linearity of
R
2
≥ 99.92% for the proposed LabDisk method
vs. R
2
≥ 99.67% in manual reference dilutions. In a second step, the disk automated serial dilutions are combined with on-disk qPCR thermocycling and readout, both inside a LabDisk player. A 4-log-stage linearity of
R
2
≥ 99.81% and a sensitivity of one leukemia associated
ETV6-RUNX1
mutant DNA copy in a background of 100 000 wild-type DNA copies are achieved.
Time-independent, serial valving under rotation on centrifugal microfluidic platforms by a fill-level-coupled temperature change rate (FLC-TCR) actuated principle.</abstract><cop>England</cop><pub>Royal Society of Chemistry</pub><pmid>31139783</pmid><doi>10.1039/c9lc00092e</doi><tpages>15</tpages><orcidid>https://orcid.org/0000-0003-1448-9831</orcidid><orcidid>https://orcid.org/0000-0002-9769-391X</orcidid><orcidid>https://orcid.org/0000-0002-7602-0484</orcidid></addata></record> |
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issn | 1473-0197 1473-0189 |
language | eng |
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source | Royal Society Of Chemistry Journals 2008-; Alma/SFX Local Collection |
subjects | Automation Dilution Disks Foils Linearity Microfluidics Temperature control Thermal cycling Thermoforming Wetting |
title | Automated serial dilutions for high-dynamic-range assays enabled by fill-level-coupled valving in centrifugal microfluidics |
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