Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study

The cationic (1,3,5-triazapentadiene)Pt II complex [Pt{NH&z.dbd;C(N(CH 2 ) 5 )N(Ph)C(NH 2 )&z.dbd;NPh} 2 ]Cl 2 ([ 1 ]Cl 2 ) was crystallized from four haloalkane solvents giving [ 1 ][Cl 2 (CDCl 3 ) 4 ], [ 1 ][Cl 2 (CHBr 3 ) 4 ], [ 1 ][Cl 2 (CH 2 Cl 2 ) 2 ], and [ 1 ][Cl 2 (C 2 H 4 Cl 2 ) 2...

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Veröffentlicht in:Physical chemistry chemical physics : PCCP 2016-05, Vol.18 (2), p.1414-14112
Hauptverfasser: Serebryanskaya, Tatiyana V, Novikov, Alexander S, Gushchin, Pavel V, Haukka, Matti, Asfin, Ruslan E, Tolstoy, Peter M, Kukushkin, Vadim Yu
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container_title Physical chemistry chemical physics : PCCP
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creator Serebryanskaya, Tatiyana V
Novikov, Alexander S
Gushchin, Pavel V
Haukka, Matti
Asfin, Ruslan E
Tolstoy, Peter M
Kukushkin, Vadim Yu
description The cationic (1,3,5-triazapentadiene)Pt II complex [Pt{NH&z.dbd;C(N(CH 2 ) 5 )N(Ph)C(NH 2 )&z.dbd;NPh} 2 ]Cl 2 ([ 1 ]Cl 2 ) was crystallized from four haloalkane solvents giving [ 1 ][Cl 2 (CDCl 3 ) 4 ], [ 1 ][Cl 2 (CHBr 3 ) 4 ], [ 1 ][Cl 2 (CH 2 Cl 2 ) 2 ], and [ 1 ][Cl 2 (C 2 H 4 Cl 2 ) 2 ] solvates that were studied by X-ray diffraction. In the crystal structures of [ 1 ][Cl 2 (CDCl 3 ) 4 ] and [ 1 ][Cl 2 (CHBr 3 ) 4 ], the Cl − ion interacts with two haloform molecules via C-D Cl − and C-H Cl − contacts, thus forming the negatively charged isostructural clusters [Cl(CDCl 3 ) 2 ] − and [Cl(CHBr 3 ) 2 ] − . In the structures of [ 1 ][Cl 2 (CH 2 Cl 2 ) 2 ] and [ 1 ][Cl 2 (C 2 H 4 Cl 2 ) 2 ], cations [ 1 ] 2+ are linked to a 3D-network by a system of H-bondings including one formed by each Cl − ion with CH 2 Cl 2 or C 2 H 4 Cl 2 molecules. The lengths and energies of these H-bonds in the chloride-haloalkane clusters were analyzed by DFT calculations (M06 functional) including AIM analysis. The crystal packing noticeably affected the geometry of the clusters, and energy of C-H Cl − hydrogen bonds ranged from 1 to 6 kcal mol −1 . An exponential correlation ( R 2 > 0.98) between the calculated Cl − H distances and the energies of the corresponding contacts was found and used to calculate hydrogen bond energies from the experimental Cl − H distances. Predicted energy values (3.3-3.9 kcal mol −1 for the [Cl(CHCl 3 ) 2 ] − cluster) are in a reasonable agreement with the energy of the Cl 3 C-H Cl − bond estimated using ATRFTIR spectroscopy (2.7 kcal mol −1 ). An exponential correlation was found between interatomic H Cl − distances and energies of the corresponding C-H Cl − contacts in the solid state.
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In the crystal structures of [ 1 ][Cl 2 (CDCl 3 ) 4 ] and [ 1 ][Cl 2 (CHBr 3 ) 4 ], the Cl − ion interacts with two haloform molecules via C-D Cl − and C-H Cl − contacts, thus forming the negatively charged isostructural clusters [Cl(CDCl 3 ) 2 ] − and [Cl(CHBr 3 ) 2 ] − . In the structures of [ 1 ][Cl 2 (CH 2 Cl 2 ) 2 ] and [ 1 ][Cl 2 (C 2 H 4 Cl 2 ) 2 ], cations [ 1 ] 2+ are linked to a 3D-network by a system of H-bondings including one formed by each Cl − ion with CH 2 Cl 2 or C 2 H 4 Cl 2 molecules. The lengths and energies of these H-bonds in the chloride-haloalkane clusters were analyzed by DFT calculations (M06 functional) including AIM analysis. The crystal packing noticeably affected the geometry of the clusters, and energy of C-H Cl − hydrogen bonds ranged from 1 to 6 kcal mol −1 . An exponential correlation ( R 2 &gt; 0.98) between the calculated Cl − H distances and the energies of the corresponding contacts was found and used to calculate hydrogen bond energies from the experimental Cl − H distances. Predicted energy values (3.3-3.9 kcal mol −1 for the [Cl(CHCl 3 ) 2 ] − cluster) are in a reasonable agreement with the energy of the Cl 3 C-H Cl − bond estimated using ATRFTIR spectroscopy (2.7 kcal mol −1 ). 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In the crystal structures of [ 1 ][Cl 2 (CDCl 3 ) 4 ] and [ 1 ][Cl 2 (CHBr 3 ) 4 ], the Cl − ion interacts with two haloform molecules via C-D Cl − and C-H Cl − contacts, thus forming the negatively charged isostructural clusters [Cl(CDCl 3 ) 2 ] − and [Cl(CHBr 3 ) 2 ] − . In the structures of [ 1 ][Cl 2 (CH 2 Cl 2 ) 2 ] and [ 1 ][Cl 2 (C 2 H 4 Cl 2 ) 2 ], cations [ 1 ] 2+ are linked to a 3D-network by a system of H-bondings including one formed by each Cl − ion with CH 2 Cl 2 or C 2 H 4 Cl 2 molecules. The lengths and energies of these H-bonds in the chloride-haloalkane clusters were analyzed by DFT calculations (M06 functional) including AIM analysis. The crystal packing noticeably affected the geometry of the clusters, and energy of C-H Cl − hydrogen bonds ranged from 1 to 6 kcal mol −1 . An exponential correlation ( R 2 &gt; 0.98) between the calculated Cl − H distances and the energies of the corresponding contacts was found and used to calculate hydrogen bond energies from the experimental Cl − H distances. Predicted energy values (3.3-3.9 kcal mol −1 for the [Cl(CHCl 3 ) 2 ] − cluster) are in a reasonable agreement with the energy of the Cl 3 C-H Cl − bond estimated using ATRFTIR spectroscopy (2.7 kcal mol −1 ). An exponential correlation was found between interatomic H Cl − distances and energies of the corresponding C-H Cl − contacts in the solid state.</description><subject>Chlorides</subject><subject>Clusters</subject><subject>Contact</subject><subject>Energy use</subject><subject>Hydrogen bonds</subject><subject>Mathematical analysis</subject><subject>Spectroscopy</subject><subject>X-rays</subject><issn>1463-9076</issn><issn>1463-9084</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqFkstu1TAQhi0EohfYsAd52SICviRxzA6F0laqBAuQ2EXOZNJj8ImD7SzOG_GYdTjt6ZKV5_Lp18z8JuQVZ-85k_oD1DAz1tQcn5BjXtay0Kwpnx5iVR-Rkxh_McZ4xeVzciQUr5Ss9DH5ez3glOxowSTrJ2qmgV6dfT4vep8jnDDcWozUj7Qt1jptHbVTwmBg5WNOKGycD3bAYmOcN-63mZCCW2Km4kdqKPhtbycc6M8imB2FsIvJOOdvg5k3Ft7ROCOk4CP4eU3XGdIGfcCUx3I0pmXYvSDPRuMivrx_T8mPLxff26vi5uvldfvppoCSV6kwlRB6UBoEKlmbihnBUaJSXDVCN9oYaOpRN1ii6kfDeC9AiqZnGnVZ8l6ekrO97hz8nwVj6rY2AjqXt_JL7HjDq6wjyur_qNL54kqLOqNv9yjkNWPAsZuD3Zqw6zjrVhO7tm6__TPxIsNv7nWXfovDAX1wLQOv90CIcOg-_gJ5B4WuokU</recordid><startdate>20160518</startdate><enddate>20160518</enddate><creator>Serebryanskaya, Tatiyana V</creator><creator>Novikov, Alexander S</creator><creator>Gushchin, Pavel V</creator><creator>Haukka, Matti</creator><creator>Asfin, Ruslan E</creator><creator>Tolstoy, Peter M</creator><creator>Kukushkin, Vadim Yu</creator><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope><orcidid>https://orcid.org/0000-0002-5886-101X</orcidid><orcidid>https://orcid.org/0000-0002-8426-3988</orcidid></search><sort><creationdate>20160518</creationdate><title>Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study</title><author>Serebryanskaya, Tatiyana V ; Novikov, Alexander S ; Gushchin, Pavel V ; Haukka, Matti ; Asfin, Ruslan E ; Tolstoy, Peter M ; Kukushkin, Vadim Yu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c415t-a5229d79c2e736a50a21e3e771782989aac86f98e4e7bfa01b2c328b09e9441b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Chlorides</topic><topic>Clusters</topic><topic>Contact</topic><topic>Energy use</topic><topic>Hydrogen bonds</topic><topic>Mathematical analysis</topic><topic>Spectroscopy</topic><topic>X-rays</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Serebryanskaya, Tatiyana V</creatorcontrib><creatorcontrib>Novikov, Alexander S</creatorcontrib><creatorcontrib>Gushchin, Pavel V</creatorcontrib><creatorcontrib>Haukka, Matti</creatorcontrib><creatorcontrib>Asfin, Ruslan E</creatorcontrib><creatorcontrib>Tolstoy, Peter M</creatorcontrib><creatorcontrib>Kukushkin, Vadim Yu</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Physical chemistry chemical physics : PCCP</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Serebryanskaya, Tatiyana V</au><au>Novikov, Alexander S</au><au>Gushchin, Pavel V</au><au>Haukka, Matti</au><au>Asfin, Ruslan E</au><au>Tolstoy, Peter M</au><au>Kukushkin, Vadim Yu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study</atitle><jtitle>Physical chemistry chemical physics : PCCP</jtitle><addtitle>Phys Chem Chem Phys</addtitle><date>2016-05-18</date><risdate>2016</risdate><volume>18</volume><issue>2</issue><spage>1414</spage><epage>14112</epage><pages>1414-14112</pages><issn>1463-9076</issn><eissn>1463-9084</eissn><abstract>The cationic (1,3,5-triazapentadiene)Pt II complex [Pt{NH&amp;z.dbd;C(N(CH 2 ) 5 )N(Ph)C(NH 2 )&amp;z.dbd;NPh} 2 ]Cl 2 ([ 1 ]Cl 2 ) was crystallized from four haloalkane solvents giving [ 1 ][Cl 2 (CDCl 3 ) 4 ], [ 1 ][Cl 2 (CHBr 3 ) 4 ], [ 1 ][Cl 2 (CH 2 Cl 2 ) 2 ], and [ 1 ][Cl 2 (C 2 H 4 Cl 2 ) 2 ] solvates that were studied by X-ray diffraction. In the crystal structures of [ 1 ][Cl 2 (CDCl 3 ) 4 ] and [ 1 ][Cl 2 (CHBr 3 ) 4 ], the Cl − ion interacts with two haloform molecules via C-D Cl − and C-H Cl − contacts, thus forming the negatively charged isostructural clusters [Cl(CDCl 3 ) 2 ] − and [Cl(CHBr 3 ) 2 ] − . In the structures of [ 1 ][Cl 2 (CH 2 Cl 2 ) 2 ] and [ 1 ][Cl 2 (C 2 H 4 Cl 2 ) 2 ], cations [ 1 ] 2+ are linked to a 3D-network by a system of H-bondings including one formed by each Cl − ion with CH 2 Cl 2 or C 2 H 4 Cl 2 molecules. The lengths and energies of these H-bonds in the chloride-haloalkane clusters were analyzed by DFT calculations (M06 functional) including AIM analysis. The crystal packing noticeably affected the geometry of the clusters, and energy of C-H Cl − hydrogen bonds ranged from 1 to 6 kcal mol −1 . An exponential correlation ( R 2 &gt; 0.98) between the calculated Cl − H distances and the energies of the corresponding contacts was found and used to calculate hydrogen bond energies from the experimental Cl − H distances. Predicted energy values (3.3-3.9 kcal mol −1 for the [Cl(CHCl 3 ) 2 ] − cluster) are in a reasonable agreement with the energy of the Cl 3 C-H Cl − bond estimated using ATRFTIR spectroscopy (2.7 kcal mol −1 ). An exponential correlation was found between interatomic H Cl − distances and energies of the corresponding C-H Cl − contacts in the solid state.</abstract><cop>England</cop><pmid>27157359</pmid><doi>10.1039/c6cp00861e</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-5886-101X</orcidid><orcidid>https://orcid.org/0000-0002-8426-3988</orcidid><oa>free_for_read</oa></addata></record>
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source Royal Society Of Chemistry Journals 2008-; Alma/SFX Local Collection
subjects Chlorides
Clusters
Contact
Energy use
Hydrogen bonds
Mathematical analysis
Spectroscopy
X-rays
title Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study
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