Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study
The cationic (1,3,5-triazapentadiene)Pt II complex [Pt{NH&z.dbd;C(N(CH 2 ) 5 )N(Ph)C(NH 2 )&z.dbd;NPh} 2 ]Cl 2 ([ 1 ]Cl 2 ) was crystallized from four haloalkane solvents giving [ 1 ][Cl 2 (CDCl 3 ) 4 ], [ 1 ][Cl 2 (CHBr 3 ) 4 ], [ 1 ][Cl 2 (CH 2 Cl 2 ) 2 ], and [ 1 ][Cl 2 (C 2 H 4 Cl 2 ) 2...
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creator | Serebryanskaya, Tatiyana V Novikov, Alexander S Gushchin, Pavel V Haukka, Matti Asfin, Ruslan E Tolstoy, Peter M Kukushkin, Vadim Yu |
description | The cationic (1,3,5-triazapentadiene)Pt
II
complex [Pt{NH&z.dbd;C(N(CH
2
)
5
)N(Ph)C(NH
2
)&z.dbd;NPh}
2
]Cl
2
([
1
]Cl
2
) was crystallized from four haloalkane solvents giving [
1
][Cl
2
(CDCl
3
)
4
], [
1
][Cl
2
(CHBr
3
)
4
], [
1
][Cl
2
(CH
2
Cl
2
)
2
], and [
1
][Cl
2
(C
2
H
4
Cl
2
)
2
] solvates that were studied by X-ray diffraction. In the crystal structures of [
1
][Cl
2
(CDCl
3
)
4
] and [
1
][Cl
2
(CHBr
3
)
4
], the Cl
−
ion interacts with two haloform molecules
via
C-D Cl
−
and C-H Cl
−
contacts, thus forming the negatively charged isostructural clusters [Cl(CDCl
3
)
2
]
−
and [Cl(CHBr
3
)
2
]
−
. In the structures of [
1
][Cl
2
(CH
2
Cl
2
)
2
] and [
1
][Cl
2
(C
2
H
4
Cl
2
)
2
], cations [
1
]
2+
are linked to a 3D-network by a system of H-bondings including one formed by each Cl
−
ion with CH
2
Cl
2
or C
2
H
4
Cl
2
molecules. The lengths and energies of these H-bonds in the chloride-haloalkane clusters were analyzed by DFT calculations (M06 functional) including AIM analysis. The crystal packing noticeably affected the geometry of the clusters, and energy of C-H Cl
−
hydrogen bonds ranged from 1 to 6 kcal mol
−1
. An exponential correlation (
R
2
> 0.98) between the calculated Cl
−
H distances and the energies of the corresponding contacts was found and used to calculate hydrogen bond energies from the experimental Cl
−
H distances. Predicted energy values (3.3-3.9 kcal mol
−1
for the [Cl(CHCl
3
)
2
]
−
cluster) are in a reasonable agreement with the energy of the Cl
3
C-H Cl
−
bond estimated using ATRFTIR spectroscopy (2.7 kcal mol
−1
).
An exponential correlation was found between interatomic H Cl
−
distances and energies of the corresponding C-H Cl
−
contacts in the solid state. |
doi_str_mv | 10.1039/c6cp00861e |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_rsc_primary_c6cp00861e</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1790017926</sourcerecordid><originalsourceid>FETCH-LOGICAL-c415t-a5229d79c2e736a50a21e3e771782989aac86f98e4e7bfa01b2c328b09e9441b3</originalsourceid><addsrcrecordid>eNqFkstu1TAQhi0EohfYsAd52SICviRxzA6F0laqBAuQ2EXOZNJj8ImD7SzOG_GYdTjt6ZKV5_Lp18z8JuQVZ-85k_oD1DAz1tQcn5BjXtay0Kwpnx5iVR-Rkxh_McZ4xeVzciQUr5Ss9DH5ez3glOxowSTrJ2qmgV6dfT4vep8jnDDcWozUj7Qt1jptHbVTwmBg5WNOKGycD3bAYmOcN-63mZCCW2Km4kdqKPhtbycc6M8imB2FsIvJOOdvg5k3Ft7ROCOk4CP4eU3XGdIGfcCUx3I0pmXYvSDPRuMivrx_T8mPLxff26vi5uvldfvppoCSV6kwlRB6UBoEKlmbihnBUaJSXDVCN9oYaOpRN1ii6kfDeC9AiqZnGnVZ8l6ekrO97hz8nwVj6rY2AjqXt_JL7HjDq6wjyur_qNL54kqLOqNv9yjkNWPAsZuD3Zqw6zjrVhO7tm6__TPxIsNv7nWXfovDAX1wLQOv90CIcOg-_gJ5B4WuokU</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1790017926</pqid></control><display><type>article</type><title>Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study</title><source>Royal Society Of Chemistry Journals 2008-</source><source>Alma/SFX Local Collection</source><creator>Serebryanskaya, Tatiyana V ; Novikov, Alexander S ; Gushchin, Pavel V ; Haukka, Matti ; Asfin, Ruslan E ; Tolstoy, Peter M ; Kukushkin, Vadim Yu</creator><creatorcontrib>Serebryanskaya, Tatiyana V ; Novikov, Alexander S ; Gushchin, Pavel V ; Haukka, Matti ; Asfin, Ruslan E ; Tolstoy, Peter M ; Kukushkin, Vadim Yu</creatorcontrib><description>The cationic (1,3,5-triazapentadiene)Pt
II
complex [Pt{NH&z.dbd;C(N(CH
2
)
5
)N(Ph)C(NH
2
)&z.dbd;NPh}
2
]Cl
2
([
1
]Cl
2
) was crystallized from four haloalkane solvents giving [
1
][Cl
2
(CDCl
3
)
4
], [
1
][Cl
2
(CHBr
3
)
4
], [
1
][Cl
2
(CH
2
Cl
2
)
2
], and [
1
][Cl
2
(C
2
H
4
Cl
2
)
2
] solvates that were studied by X-ray diffraction. In the crystal structures of [
1
][Cl
2
(CDCl
3
)
4
] and [
1
][Cl
2
(CHBr
3
)
4
], the Cl
−
ion interacts with two haloform molecules
via
C-D Cl
−
and C-H Cl
−
contacts, thus forming the negatively charged isostructural clusters [Cl(CDCl
3
)
2
]
−
and [Cl(CHBr
3
)
2
]
−
. In the structures of [
1
][Cl
2
(CH
2
Cl
2
)
2
] and [
1
][Cl
2
(C
2
H
4
Cl
2
)
2
], cations [
1
]
2+
are linked to a 3D-network by a system of H-bondings including one formed by each Cl
−
ion with CH
2
Cl
2
or C
2
H
4
Cl
2
molecules. The lengths and energies of these H-bonds in the chloride-haloalkane clusters were analyzed by DFT calculations (M06 functional) including AIM analysis. The crystal packing noticeably affected the geometry of the clusters, and energy of C-H Cl
−
hydrogen bonds ranged from 1 to 6 kcal mol
−1
. An exponential correlation (
R
2
> 0.98) between the calculated Cl
−
H distances and the energies of the corresponding contacts was found and used to calculate hydrogen bond energies from the experimental Cl
−
H distances. Predicted energy values (3.3-3.9 kcal mol
−1
for the [Cl(CHCl
3
)
2
]
−
cluster) are in a reasonable agreement with the energy of the Cl
3
C-H Cl
−
bond estimated using ATRFTIR spectroscopy (2.7 kcal mol
−1
).
An exponential correlation was found between interatomic H Cl
−
distances and energies of the corresponding C-H Cl
−
contacts in the solid state.</description><identifier>ISSN: 1463-9076</identifier><identifier>EISSN: 1463-9084</identifier><identifier>DOI: 10.1039/c6cp00861e</identifier><identifier>PMID: 27157359</identifier><language>eng</language><publisher>England</publisher><subject>Chlorides ; Clusters ; Contact ; Energy use ; Hydrogen bonds ; Mathematical analysis ; Spectroscopy ; X-rays</subject><ispartof>Physical chemistry chemical physics : PCCP, 2016-05, Vol.18 (2), p.1414-14112</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c415t-a5229d79c2e736a50a21e3e771782989aac86f98e4e7bfa01b2c328b09e9441b3</citedby><cites>FETCH-LOGICAL-c415t-a5229d79c2e736a50a21e3e771782989aac86f98e4e7bfa01b2c328b09e9441b3</cites><orcidid>0000-0002-5886-101X ; 0000-0002-8426-3988</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27157359$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Serebryanskaya, Tatiyana V</creatorcontrib><creatorcontrib>Novikov, Alexander S</creatorcontrib><creatorcontrib>Gushchin, Pavel V</creatorcontrib><creatorcontrib>Haukka, Matti</creatorcontrib><creatorcontrib>Asfin, Ruslan E</creatorcontrib><creatorcontrib>Tolstoy, Peter M</creatorcontrib><creatorcontrib>Kukushkin, Vadim Yu</creatorcontrib><title>Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study</title><title>Physical chemistry chemical physics : PCCP</title><addtitle>Phys Chem Chem Phys</addtitle><description>The cationic (1,3,5-triazapentadiene)Pt
II
complex [Pt{NH&z.dbd;C(N(CH
2
)
5
)N(Ph)C(NH
2
)&z.dbd;NPh}
2
]Cl
2
([
1
]Cl
2
) was crystallized from four haloalkane solvents giving [
1
][Cl
2
(CDCl
3
)
4
], [
1
][Cl
2
(CHBr
3
)
4
], [
1
][Cl
2
(CH
2
Cl
2
)
2
], and [
1
][Cl
2
(C
2
H
4
Cl
2
)
2
] solvates that were studied by X-ray diffraction. In the crystal structures of [
1
][Cl
2
(CDCl
3
)
4
] and [
1
][Cl
2
(CHBr
3
)
4
], the Cl
−
ion interacts with two haloform molecules
via
C-D Cl
−
and C-H Cl
−
contacts, thus forming the negatively charged isostructural clusters [Cl(CDCl
3
)
2
]
−
and [Cl(CHBr
3
)
2
]
−
. In the structures of [
1
][Cl
2
(CH
2
Cl
2
)
2
] and [
1
][Cl
2
(C
2
H
4
Cl
2
)
2
], cations [
1
]
2+
are linked to a 3D-network by a system of H-bondings including one formed by each Cl
−
ion with CH
2
Cl
2
or C
2
H
4
Cl
2
molecules. The lengths and energies of these H-bonds in the chloride-haloalkane clusters were analyzed by DFT calculations (M06 functional) including AIM analysis. The crystal packing noticeably affected the geometry of the clusters, and energy of C-H Cl
−
hydrogen bonds ranged from 1 to 6 kcal mol
−1
. An exponential correlation (
R
2
> 0.98) between the calculated Cl
−
H distances and the energies of the corresponding contacts was found and used to calculate hydrogen bond energies from the experimental Cl
−
H distances. Predicted energy values (3.3-3.9 kcal mol
−1
for the [Cl(CHCl
3
)
2
]
−
cluster) are in a reasonable agreement with the energy of the Cl
3
C-H Cl
−
bond estimated using ATRFTIR spectroscopy (2.7 kcal mol
−1
).
An exponential correlation was found between interatomic H Cl
−
distances and energies of the corresponding C-H Cl
−
contacts in the solid state.</description><subject>Chlorides</subject><subject>Clusters</subject><subject>Contact</subject><subject>Energy use</subject><subject>Hydrogen bonds</subject><subject>Mathematical analysis</subject><subject>Spectroscopy</subject><subject>X-rays</subject><issn>1463-9076</issn><issn>1463-9084</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqFkstu1TAQhi0EohfYsAd52SICviRxzA6F0laqBAuQ2EXOZNJj8ImD7SzOG_GYdTjt6ZKV5_Lp18z8JuQVZ-85k_oD1DAz1tQcn5BjXtay0Kwpnx5iVR-Rkxh_McZ4xeVzciQUr5Ss9DH5ez3glOxowSTrJ2qmgV6dfT4vep8jnDDcWozUj7Qt1jptHbVTwmBg5WNOKGycD3bAYmOcN-63mZCCW2Km4kdqKPhtbycc6M8imB2FsIvJOOdvg5k3Ft7ROCOk4CP4eU3XGdIGfcCUx3I0pmXYvSDPRuMivrx_T8mPLxff26vi5uvldfvppoCSV6kwlRB6UBoEKlmbihnBUaJSXDVCN9oYaOpRN1ii6kfDeC9AiqZnGnVZ8l6ekrO97hz8nwVj6rY2AjqXt_JL7HjDq6wjyur_qNL54kqLOqNv9yjkNWPAsZuD3Zqw6zjrVhO7tm6__TPxIsNv7nWXfovDAX1wLQOv90CIcOg-_gJ5B4WuokU</recordid><startdate>20160518</startdate><enddate>20160518</enddate><creator>Serebryanskaya, Tatiyana V</creator><creator>Novikov, Alexander S</creator><creator>Gushchin, Pavel V</creator><creator>Haukka, Matti</creator><creator>Asfin, Ruslan E</creator><creator>Tolstoy, Peter M</creator><creator>Kukushkin, Vadim Yu</creator><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope><orcidid>https://orcid.org/0000-0002-5886-101X</orcidid><orcidid>https://orcid.org/0000-0002-8426-3988</orcidid></search><sort><creationdate>20160518</creationdate><title>Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study</title><author>Serebryanskaya, Tatiyana V ; Novikov, Alexander S ; Gushchin, Pavel V ; Haukka, Matti ; Asfin, Ruslan E ; Tolstoy, Peter M ; Kukushkin, Vadim Yu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c415t-a5229d79c2e736a50a21e3e771782989aac86f98e4e7bfa01b2c328b09e9441b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Chlorides</topic><topic>Clusters</topic><topic>Contact</topic><topic>Energy use</topic><topic>Hydrogen bonds</topic><topic>Mathematical analysis</topic><topic>Spectroscopy</topic><topic>X-rays</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Serebryanskaya, Tatiyana V</creatorcontrib><creatorcontrib>Novikov, Alexander S</creatorcontrib><creatorcontrib>Gushchin, Pavel V</creatorcontrib><creatorcontrib>Haukka, Matti</creatorcontrib><creatorcontrib>Asfin, Ruslan E</creatorcontrib><creatorcontrib>Tolstoy, Peter M</creatorcontrib><creatorcontrib>Kukushkin, Vadim Yu</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Physical chemistry chemical physics : PCCP</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Serebryanskaya, Tatiyana V</au><au>Novikov, Alexander S</au><au>Gushchin, Pavel V</au><au>Haukka, Matti</au><au>Asfin, Ruslan E</au><au>Tolstoy, Peter M</au><au>Kukushkin, Vadim Yu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study</atitle><jtitle>Physical chemistry chemical physics : PCCP</jtitle><addtitle>Phys Chem Chem Phys</addtitle><date>2016-05-18</date><risdate>2016</risdate><volume>18</volume><issue>2</issue><spage>1414</spage><epage>14112</epage><pages>1414-14112</pages><issn>1463-9076</issn><eissn>1463-9084</eissn><abstract>The cationic (1,3,5-triazapentadiene)Pt
II
complex [Pt{NH&z.dbd;C(N(CH
2
)
5
)N(Ph)C(NH
2
)&z.dbd;NPh}
2
]Cl
2
([
1
]Cl
2
) was crystallized from four haloalkane solvents giving [
1
][Cl
2
(CDCl
3
)
4
], [
1
][Cl
2
(CHBr
3
)
4
], [
1
][Cl
2
(CH
2
Cl
2
)
2
], and [
1
][Cl
2
(C
2
H
4
Cl
2
)
2
] solvates that were studied by X-ray diffraction. In the crystal structures of [
1
][Cl
2
(CDCl
3
)
4
] and [
1
][Cl
2
(CHBr
3
)
4
], the Cl
−
ion interacts with two haloform molecules
via
C-D Cl
−
and C-H Cl
−
contacts, thus forming the negatively charged isostructural clusters [Cl(CDCl
3
)
2
]
−
and [Cl(CHBr
3
)
2
]
−
. In the structures of [
1
][Cl
2
(CH
2
Cl
2
)
2
] and [
1
][Cl
2
(C
2
H
4
Cl
2
)
2
], cations [
1
]
2+
are linked to a 3D-network by a system of H-bondings including one formed by each Cl
−
ion with CH
2
Cl
2
or C
2
H
4
Cl
2
molecules. The lengths and energies of these H-bonds in the chloride-haloalkane clusters were analyzed by DFT calculations (M06 functional) including AIM analysis. The crystal packing noticeably affected the geometry of the clusters, and energy of C-H Cl
−
hydrogen bonds ranged from 1 to 6 kcal mol
−1
. An exponential correlation (
R
2
> 0.98) between the calculated Cl
−
H distances and the energies of the corresponding contacts was found and used to calculate hydrogen bond energies from the experimental Cl
−
H distances. Predicted energy values (3.3-3.9 kcal mol
−1
for the [Cl(CHCl
3
)
2
]
−
cluster) are in a reasonable agreement with the energy of the Cl
3
C-H Cl
−
bond estimated using ATRFTIR spectroscopy (2.7 kcal mol
−1
).
An exponential correlation was found between interatomic H Cl
−
distances and energies of the corresponding C-H Cl
−
contacts in the solid state.</abstract><cop>England</cop><pmid>27157359</pmid><doi>10.1039/c6cp00861e</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-5886-101X</orcidid><orcidid>https://orcid.org/0000-0002-8426-3988</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
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issn | 1463-9076 1463-9084 |
language | eng |
recordid | cdi_rsc_primary_c6cp00861e |
source | Royal Society Of Chemistry Journals 2008-; Alma/SFX Local Collection |
subjects | Chlorides Clusters Contact Energy use Hydrogen bonds Mathematical analysis Spectroscopy X-rays |
title | Identification and H(D)-bond energies of C-H(D) Cl interactions in chloride-haloalkane clusters: a combined X-ray crystallographic, spectroscopic, and theoretical study |
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