Transformation of sulfur compounds by an abundant lineage of marine bacteria in the α-subclass of the class Proteobacteria
Members of a group of marine bacteria that is numerically important in coastal seawater and sediments were characterized with respect to their ability to transform organic and inorganic sulfur compounds. Fifteen strains representing the Roseobacter group (a phylogenetic cluster of marine bacteria in...
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description | Members of a group of marine bacteria that is numerically important in coastal seawater and sediments were characterized with respect to their ability to transform organic and inorganic sulfur compounds. Fifteen strains representing the Roseobacter group (a phylogenetic cluster of marine bacteria in the alpha-subclass of the class Proteobacteria) were isolated from seawater, primarily from the southeastern United States. Although more than one-half of the isolates were obtained without any selection for sulfur metabolism, all of the isolates were able to degrade the sulfur-containing osmolyte dimethyl sulfoniopropionate (DMSP) with production of dimethyl sulfide (DMS). Five isolates also degraded DMSP with production of methanethiol, indicating that both cleavage and demethylation pathways for DMSP occurred in the same organism, which is unusual. Five isolates were able to reduce dimethyl sulfoxide to DMS, and several isolates also degraded DMS and methanethiol. Sulfite oxygenase activity and methanesulfonic acid oxygenase activity were also present in some of the isolates. The ability to incorporate the reduced sulfur in DMSP and methanethiol into cellular material was studied with one of the isolates. A group-specific 16S rRNA probe indicated that the relative abundance of uncultured bacteria in the Roseobacter group increased in seawater enriched with DMSP or DMS. Because this group typically accounts for >10% of the 16S ribosomal DNA pool in coastal seawater and sediments of the southern United States, clues about its potential biogeochemical role are of particular interest. Studies of culturable representatives suggested that the group could mediate a number of steps in the cycling of both organic and inorganic forms of sulfur in marine environments. |
doi_str_mv | 10.1128/aem.65.9.3810-3819.1999 |
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M ; KIENE, R. P ; MORAN, M. A</creator><creatorcontrib>GONZALEZ, J. M ; KIENE, R. P ; MORAN, M. A</creatorcontrib><description>Members of a group of marine bacteria that is numerically important in coastal seawater and sediments were characterized with respect to their ability to transform organic and inorganic sulfur compounds. Fifteen strains representing the Roseobacter group (a phylogenetic cluster of marine bacteria in the alpha-subclass of the class Proteobacteria) were isolated from seawater, primarily from the southeastern United States. Although more than one-half of the isolates were obtained without any selection for sulfur metabolism, all of the isolates were able to degrade the sulfur-containing osmolyte dimethyl sulfoniopropionate (DMSP) with production of dimethyl sulfide (DMS). Five isolates also degraded DMSP with production of methanethiol, indicating that both cleavage and demethylation pathways for DMSP occurred in the same organism, which is unusual. Five isolates were able to reduce dimethyl sulfoxide to DMS, and several isolates also degraded DMS and methanethiol. Sulfite oxygenase activity and methanesulfonic acid oxygenase activity were also present in some of the isolates. The ability to incorporate the reduced sulfur in DMSP and methanethiol into cellular material was studied with one of the isolates. A group-specific 16S rRNA probe indicated that the relative abundance of uncultured bacteria in the Roseobacter group increased in seawater enriched with DMSP or DMS. Because this group typically accounts for >10% of the 16S ribosomal DNA pool in coastal seawater and sediments of the southern United States, clues about its potential biogeochemical role are of particular interest. Studies of culturable representatives suggested that the group could mediate a number of steps in the cycling of both organic and inorganic forms of sulfur in marine environments.</description><identifier>ISSN: 0099-2240</identifier><identifier>EISSN: 1098-5336</identifier><identifier>DOI: 10.1128/aem.65.9.3810-3819.1999</identifier><identifier>PMID: 10473380</identifier><identifier>CODEN: AEMIDF</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Alphaproteobacteria - genetics ; Alphaproteobacteria - isolation & purification ; Alphaproteobacteria - metabolism ; Animal, plant and microbial ecology ; Bacteria ; Biodegradation, Environmental ; Biological and medical sciences ; Culture Media ; Dimethyl sulfide ; Dimethyl sulfoniopropionate ; Dimethyl sulfoniopropionic acid ; DNA, Bacterial - genetics ; Ecosystem ; Fundamental and applied biological sciences. Psychology ; General Microbial Ecology ; Geologic Sediments - microbiology ; Marine ; Metabolism ; Methanesulfonic acid oxygenase ; Methanethiol ; Microbial ecology ; Microbiology ; Molecular Sequence Data ; Oxidation-Reduction ; Phylogeny ; Proteobacteria ; RNA Probes ; RNA, Ribosomal, 16S - genetics ; Roseobacter ; rRNA 16S ; Seawater - microbiology ; Sulfides - metabolism ; Sulfite oxygenase ; Sulfonium Compounds - metabolism ; Sulfur ; Sulfur Compounds - metabolism ; USA ; Various environments (extraatmospheric space, air, water)</subject><ispartof>Applied and environmental microbiology, 1999-09, Vol.65 (9), p.3810-3819</ispartof><rights>1999 INIST-CNRS</rights><rights>Copyright American Society for Microbiology Sep 1999</rights><rights>Copyright © 1999, American Society for Microbiology 1999</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c614t-5af9c36ffc203b456ae988b0c6e01d14737d1fc38eaebb2cf11a0430cc63ba3c3</citedby><cites>FETCH-LOGICAL-c614t-5af9c36ffc203b456ae988b0c6e01d14737d1fc38eaebb2cf11a0430cc63ba3c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC99705/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC99705/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,3175,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=1959127$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10473380$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>GONZALEZ, J. M</creatorcontrib><creatorcontrib>KIENE, R. P</creatorcontrib><creatorcontrib>MORAN, M. A</creatorcontrib><title>Transformation of sulfur compounds by an abundant lineage of marine bacteria in the α-subclass of the class Proteobacteria</title><title>Applied and environmental microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>Members of a group of marine bacteria that is numerically important in coastal seawater and sediments were characterized with respect to their ability to transform organic and inorganic sulfur compounds. Fifteen strains representing the Roseobacter group (a phylogenetic cluster of marine bacteria in the alpha-subclass of the class Proteobacteria) were isolated from seawater, primarily from the southeastern United States. Although more than one-half of the isolates were obtained without any selection for sulfur metabolism, all of the isolates were able to degrade the sulfur-containing osmolyte dimethyl sulfoniopropionate (DMSP) with production of dimethyl sulfide (DMS). Five isolates also degraded DMSP with production of methanethiol, indicating that both cleavage and demethylation pathways for DMSP occurred in the same organism, which is unusual. Five isolates were able to reduce dimethyl sulfoxide to DMS, and several isolates also degraded DMS and methanethiol. Sulfite oxygenase activity and methanesulfonic acid oxygenase activity were also present in some of the isolates. The ability to incorporate the reduced sulfur in DMSP and methanethiol into cellular material was studied with one of the isolates. A group-specific 16S rRNA probe indicated that the relative abundance of uncultured bacteria in the Roseobacter group increased in seawater enriched with DMSP or DMS. Because this group typically accounts for >10% of the 16S ribosomal DNA pool in coastal seawater and sediments of the southern United States, clues about its potential biogeochemical role are of particular interest. Studies of culturable representatives suggested that the group could mediate a number of steps in the cycling of both organic and inorganic forms of sulfur in marine environments.</description><subject>Alphaproteobacteria - genetics</subject><subject>Alphaproteobacteria - isolation & purification</subject><subject>Alphaproteobacteria - metabolism</subject><subject>Animal, plant and microbial ecology</subject><subject>Bacteria</subject><subject>Biodegradation, Environmental</subject><subject>Biological and medical sciences</subject><subject>Culture Media</subject><subject>Dimethyl sulfide</subject><subject>Dimethyl sulfoniopropionate</subject><subject>Dimethyl sulfoniopropionic acid</subject><subject>DNA, Bacterial - genetics</subject><subject>Ecosystem</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>General Microbial Ecology</subject><subject>Geologic Sediments - microbiology</subject><subject>Marine</subject><subject>Metabolism</subject><subject>Methanesulfonic acid oxygenase</subject><subject>Methanethiol</subject><subject>Microbial ecology</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Oxidation-Reduction</subject><subject>Phylogeny</subject><subject>Proteobacteria</subject><subject>RNA Probes</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Roseobacter</subject><subject>rRNA 16S</subject><subject>Seawater - microbiology</subject><subject>Sulfides - metabolism</subject><subject>Sulfite oxygenase</subject><subject>Sulfonium Compounds - metabolism</subject><subject>Sulfur</subject><subject>Sulfur Compounds - metabolism</subject><subject>USA</subject><subject>Various environments (extraatmospheric space, air, water)</subject><issn>0099-2240</issn><issn>1098-5336</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkt9qFTEQxoMo9lh9BQ0i3u062WyyCXhTSv0DFb2o12E2J2m37CbHZFcoPpUv4jOZ9Ry1elMIEyb5fUNm8hHyjEHNWKNeoZtqKWpdc8WgKkHXTGt9j2wYaFUJzuV9sgHQumqaFo7Io5yvAaAFqR6SIwZtx7mCDfl2kTBkH9OE8xADjZ7mZfRLojZOu7iEbab9DcVAsS8JhpmOQ3B46VZ0wlQS2qOdXRqQDoHOV47--F7lpbcj5rxS69E--ZTi7OJv_DF54HHM7slhPyaf35xdnL6rzj--fX96cl5Zydq5Eui15dJ72wDvWyHRaaV6sNIB27LSSbdl3nLl0PV9Yz1jCC0HayXvkVt-TF7v6-6WfnJb68KccDS7NJT335iIg_n3JgxX5jJ-NVp3IIr85UGe4pfF5dlMQ7ZuHDG4uGTTdA1IwdWdIOu4_rXuBFtRfq3hBXz-H3gdlxTKsEwDQnNVyhWo20M2xZyT8386Y2BWt5iTsw9GCqPN6pY1aLO6pSif3h7MLd3eHgV4cQAwWxx98Yod8l9OC82ajv8EeVbMTA</recordid><startdate>19990901</startdate><enddate>19990901</enddate><creator>GONZALEZ, J. 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Psychology</topic><topic>General Microbial Ecology</topic><topic>Geologic Sediments - microbiology</topic><topic>Marine</topic><topic>Metabolism</topic><topic>Methanesulfonic acid oxygenase</topic><topic>Methanethiol</topic><topic>Microbial ecology</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Oxidation-Reduction</topic><topic>Phylogeny</topic><topic>Proteobacteria</topic><topic>RNA Probes</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Roseobacter</topic><topic>rRNA 16S</topic><topic>Seawater - microbiology</topic><topic>Sulfides - metabolism</topic><topic>Sulfite oxygenase</topic><topic>Sulfonium Compounds - metabolism</topic><topic>Sulfur</topic><topic>Sulfur Compounds - metabolism</topic><topic>USA</topic><topic>Various environments (extraatmospheric space, air, water)</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>GONZALEZ, J. M</creatorcontrib><creatorcontrib>KIENE, R. 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M</au><au>KIENE, R. P</au><au>MORAN, M. A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Transformation of sulfur compounds by an abundant lineage of marine bacteria in the α-subclass of the class Proteobacteria</atitle><jtitle>Applied and environmental microbiology</jtitle><addtitle>Appl Environ Microbiol</addtitle><date>1999-09-01</date><risdate>1999</risdate><volume>65</volume><issue>9</issue><spage>3810</spage><epage>3819</epage><pages>3810-3819</pages><issn>0099-2240</issn><eissn>1098-5336</eissn><coden>AEMIDF</coden><abstract>Members of a group of marine bacteria that is numerically important in coastal seawater and sediments were characterized with respect to their ability to transform organic and inorganic sulfur compounds. Fifteen strains representing the Roseobacter group (a phylogenetic cluster of marine bacteria in the alpha-subclass of the class Proteobacteria) were isolated from seawater, primarily from the southeastern United States. Although more than one-half of the isolates were obtained without any selection for sulfur metabolism, all of the isolates were able to degrade the sulfur-containing osmolyte dimethyl sulfoniopropionate (DMSP) with production of dimethyl sulfide (DMS). Five isolates also degraded DMSP with production of methanethiol, indicating that both cleavage and demethylation pathways for DMSP occurred in the same organism, which is unusual. Five isolates were able to reduce dimethyl sulfoxide to DMS, and several isolates also degraded DMS and methanethiol. Sulfite oxygenase activity and methanesulfonic acid oxygenase activity were also present in some of the isolates. The ability to incorporate the reduced sulfur in DMSP and methanethiol into cellular material was studied with one of the isolates. A group-specific 16S rRNA probe indicated that the relative abundance of uncultured bacteria in the Roseobacter group increased in seawater enriched with DMSP or DMS. Because this group typically accounts for >10% of the 16S ribosomal DNA pool in coastal seawater and sediments of the southern United States, clues about its potential biogeochemical role are of particular interest. Studies of culturable representatives suggested that the group could mediate a number of steps in the cycling of both organic and inorganic forms of sulfur in marine environments.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>10473380</pmid><doi>10.1128/aem.65.9.3810-3819.1999</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Alphaproteobacteria - genetics Alphaproteobacteria - isolation & purification Alphaproteobacteria - metabolism Animal, plant and microbial ecology Bacteria Biodegradation, Environmental Biological and medical sciences Culture Media Dimethyl sulfide Dimethyl sulfoniopropionate Dimethyl sulfoniopropionic acid DNA, Bacterial - genetics Ecosystem Fundamental and applied biological sciences. Psychology General Microbial Ecology Geologic Sediments - microbiology Marine Metabolism Methanesulfonic acid oxygenase Methanethiol Microbial ecology Microbiology Molecular Sequence Data Oxidation-Reduction Phylogeny Proteobacteria RNA Probes RNA, Ribosomal, 16S - genetics Roseobacter rRNA 16S Seawater - microbiology Sulfides - metabolism Sulfite oxygenase Sulfonium Compounds - metabolism Sulfur Sulfur Compounds - metabolism USA Various environments (extraatmospheric space, air, water) |
title | Transformation of sulfur compounds by an abundant lineage of marine bacteria in the α-subclass of the class Proteobacteria |
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