DrugMAP: molecular atlas and pharma-information of all drugs

The efficacy and safety of drugs are widely known to be determined by their interactions with multiple molecules of pharmacological importance, and it is therefore essential to systematically depict the molecular atlas and pharma-information of studied drugs. However, our understanding of such infor...

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Veröffentlicht in:Nucleic acids research 2023-01, Vol.51 (D1), p.D1288-D1299
Hauptverfasser: Li, Fengcheng, Yin, Jiayi, Lu, Mingkun, Mou, Minjie, Li, Zhaorong, Zeng, Zhenyu, Tan, Ying, Wang, Shanshan, Chu, Xinyi, Dai, Haibin, Hou, Tingjun, Zeng, Su, Chen, Yuzong, Zhu, Feng
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container_end_page D1299
container_issue D1
container_start_page D1288
container_title Nucleic acids research
container_volume 51
creator Li, Fengcheng
Yin, Jiayi
Lu, Mingkun
Mou, Minjie
Li, Zhaorong
Zeng, Zhenyu
Tan, Ying
Wang, Shanshan
Chu, Xinyi
Dai, Haibin
Hou, Tingjun
Zeng, Su
Chen, Yuzong
Zhu, Feng
description The efficacy and safety of drugs are widely known to be determined by their interactions with multiple molecules of pharmacological importance, and it is therefore essential to systematically depict the molecular atlas and pharma-information of studied drugs. However, our understanding of such information is neither comprehensive nor precise, which necessitates the construction of a new database providing a network containing a large number of drugs and their interacting molecules. Here, a new database describing the molecular atlas and pharma-information of drugs (DrugMAP) was therefore constructed. It provides a comprehensive list of interacting molecules for >30 000 drugs/drug candidates, gives the differential expression patterns for >5000 interacting molecules among different disease sites, ADME (absorption, distribution, metabolism and excretion)-relevant organs and physiological tissues, and weaves a comprehensive and precise network containing >200 000 interactions among drugs and molecules. With the great efforts made to clarify the complex mechanism underlying drug pharmacokinetics and pharmacodynamics and rapidly emerging interests in artificial intelligence (AI)-based network analyses, DrugMAP is expected to become an indispensable supplement to existing databases to facilitate drug discovery. It is now fully and freely accessible at: https://idrblab.org/drugmap/.
doi_str_mv 10.1093/nar/gkac813
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source Oxford Journals Open Access Collection; MEDLINE; DOAJ Directory of Open Access Journals; PubMed Central; Free Full-Text Journals in Chemistry
subjects Artificial Intelligence
Atlases as Topic
Database Issue
Databases, Factual
Drug Discovery
Pharmaceutical Preparations
title DrugMAP: molecular atlas and pharma-information of all drugs
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