Genome-Wide Identification of the CER Gene Family and Significant Features in Climate Adaptation of Castanea mollissima

The plant cuticle is the outermost layer of the aerial organs and an important barrier against biotic and abiotic stresses. The climate varies greatly between the north and south of China, with large differences in temperature and humidity, but Chinese chestnut is found in both regions. This study i...

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Veröffentlicht in:International journal of molecular sciences 2022-12, Vol.23 (24), p.16202
Hauptverfasser: Zhao, Shuqing, Nie, Xinghua, Liu, Xueqing, Wang, Biyao, Liu, Song, Qin, Ling, Xing, Yu
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container_issue 24
container_start_page 16202
container_title International journal of molecular sciences
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creator Zhao, Shuqing
Nie, Xinghua
Liu, Xueqing
Wang, Biyao
Liu, Song
Qin, Ling
Xing, Yu
description The plant cuticle is the outermost layer of the aerial organs and an important barrier against biotic and abiotic stresses. The climate varies greatly between the north and south of China, with large differences in temperature and humidity, but Chinese chestnut is found in both regions. This study investigated the relationship between the wax layer of chestnut leaves and environmental adaptation. Firstly, semi-thin sections were used to verify that there is a significant difference in the thickness of the epicuticular wax layer between wild chestnut leaves in northwest and southeast China. Secondly, a whole-genome selective sweep was used to resequence wild chestnut samples from two typical regional populations, and significant genetic divergence was identified between the two populations in the , and genes. Thirty-four genes were identified in the whole chestnut genome, and a series of predictive analyses were performed on the identified genes. The expression patterns of genes were classified into three trends-upregulation, upregulation followed by downregulation and continuous downregulation-when chestnut seedlings were treated with drought stress. Analysis of cultivars from two resource beds in Beijing and Liyang showed that the wax layer of the northern variety was thicker than that of the southern variety. For the Y-2 ( genome sequencing material) cultivar, there were significant differences in the expression of , and between the southern variety and the northern one-year-grafted variety. Therefore, this study suggests that the family genes play a role in environmental adaptations in chestnut, laying the foundation for further exploration of genes. It also demonstrates the importance of studying the adaptation of Chinese chestnut wax biosynthesis to the southern and northern environments.
doi_str_mv 10.3390/ijms232416202
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subjects Adaptation
Alcohol
Base Sequence
Biosynthesis
Castanea mollissima
Chestnut
China
Climate
Climate adaptation
Cultivars
Cuticular wax
Divergence
Drought
Enzymes
Epicuticular wax
Fatty acids
Fruits
Gene expression
Genes
Genomes
Keratin
Leaves
Lipids
Pachira insignis
Plant cuticle
Plant Leaves - genetics
Population genetics
Populations
Precipitation
Proteins
Seedlings
Waxes
title Genome-Wide Identification of the CER Gene Family and Significant Features in Climate Adaptation of Castanea mollissima
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