PyImageJ: A library for integrating ImageJ and Python

PyImageJ: A library for integrating ImageJ and Python

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Nature methods 2022-11, Vol.19 (11), p.1326-1327
Hauptverfasser: Rueden, Curtis T., Hiner, Mark C., Evans, Edward L., Pinkert, Michael A., Lucas, Alice M., Carpenter, Anne E., Cimini, Beth A., Eliceiri, Kevin W.
Format: Artikel
Sprache:eng
Schlagworte:
631/114/1564
631/114/2398
631/114/794
Algorithms
Bioinformatics
Biological Microscopy
Biological Techniques
Biomedical and Life Sciences
Biomedical Engineering/Biotechnology
Correspondence
Gene Library
Life Sciences
Proteomics
Software
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 1327
container_issue 11
container_start_page 1326
container_title Nature methods
container_volume 19
creator Rueden, Curtis T.
Hiner, Mark C.
Evans, Edward L.
Pinkert, Michael A.
Lucas, Alice M.
Carpenter, Anne E.
Cimini, Beth A.
Eliceiri, Kevin W.
description
doi_str_mv 10.1038/s41592-022-01655-4
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_9783691</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2725651660</sourcerecordid><originalsourceid>FETCH-LOGICAL-c474t-2af756718ccb284be200b5a01ca5a4fa0ae07b5fb4879d5db58f7f914386d0e23</originalsourceid><addsrcrecordid>eNp9kctKxDAUhoMo3l_AhRTcuKnmdnJxIQziFcFZ6DqkbVornVSTjjBvb7Q6XhYuQgLnO3_O4UNoj-Ajgpk6jpyApjmm6RABkPMVtEmAq1wSDKtfb6zJBtqK8QljxjiFdbTBBAUmOGwimC6uZ7ZxNyfZJOvaItiwyOo-ZK0fXBPs0PomG4nM-iqbLobH3u-gtdp20e1-3tvo4eL8_uwqv727vD6b3OYll3zIqa0lCElUWRZU8cJRjAuwmJQWLK8ttg7LAuqCK6krqApQtaw14UyJCjvKttHpmPs8L2auKp0fgu3Mc2hnaU7T29b8rvj20TT9q9FSMaFJCjj8DAj9y9zFwczaWLqus97182iopCCACIETevAHfernwaf1EsWI5lprlSg6UmXoYwyuXg5DsHm3YkYrJlkxH1YMT037P9dYtnxpSAAbgZhKvnHh--9_Yt8Ay4iW8w</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2731949998</pqid></control><display><type>article</type><title>PyImageJ: A library for integrating ImageJ and Python</title><source>MEDLINE</source><source>Nature</source><source>SpringerLink (Online service)</source><creator>Rueden, Curtis T. ; Hiner, Mark C. ; Evans, Edward L. ; Pinkert, Michael A. ; Lucas, Alice M. ; Carpenter, Anne E. ; Cimini, Beth A. ; Eliceiri, Kevin W.</creator><creatorcontrib>Rueden, Curtis T. ; Hiner, Mark C. ; Evans, Edward L. ; Pinkert, Michael A. ; Lucas, Alice M. ; Carpenter, Anne E. ; Cimini, Beth A. ; Eliceiri, Kevin W.</creatorcontrib><identifier>ISSN: 1548-7091</identifier><identifier>EISSN: 1548-7105</identifier><identifier>DOI: 10.1038/s41592-022-01655-4</identifier><identifier>PMID: 36253645</identifier><language>eng</language><publisher>New York: Nature Publishing Group US</publisher><subject>631/114/1564 ; 631/114/2398 ; 631/114/794 ; Algorithms ; Bioinformatics ; Biological Microscopy ; Biological Techniques ; Biomedical and Life Sciences ; Biomedical Engineering/Biotechnology ; Correspondence ; Gene Library ; Life Sciences ; Proteomics ; Software</subject><ispartof>Nature methods, 2022-11, Vol.19 (11), p.1326-1327</ispartof><rights>The Author(s), under exclusive licence to Springer Nature America, Inc. 2022</rights><rights>The Author(s), under exclusive licence to Springer Nature America, Inc. 2022.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c474t-2af756718ccb284be200b5a01ca5a4fa0ae07b5fb4879d5db58f7f914386d0e23</citedby><cites>FETCH-LOGICAL-c474t-2af756718ccb284be200b5a01ca5a4fa0ae07b5fb4879d5db58f7f914386d0e23</cites><orcidid>0000-0003-1555-8261 ; 0000-0001-9640-9318 ; 0000-0001-7055-6707 ; 0000-0001-8678-670X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/s41592-022-01655-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/s41592-022-01655-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,776,780,881,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36253645$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rueden, Curtis T.</creatorcontrib><creatorcontrib>Hiner, Mark C.</creatorcontrib><creatorcontrib>Evans, Edward L.</creatorcontrib><creatorcontrib>Pinkert, Michael A.</creatorcontrib><creatorcontrib>Lucas, Alice M.</creatorcontrib><creatorcontrib>Carpenter, Anne E.</creatorcontrib><creatorcontrib>Cimini, Beth A.</creatorcontrib><creatorcontrib>Eliceiri, Kevin W.</creatorcontrib><title>PyImageJ: A library for integrating ImageJ and Python</title><title>Nature methods</title><addtitle>Nat Methods</addtitle><addtitle>Nat Methods</addtitle><subject>631/114/1564</subject><subject>631/114/2398</subject><subject>631/114/794</subject><subject>Algorithms</subject><subject>Bioinformatics</subject><subject>Biological Microscopy</subject><subject>Biological Techniques</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedical Engineering/Biotechnology</subject><subject>Correspondence</subject><subject>Gene Library</subject><subject>Life Sciences</subject><subject>Proteomics</subject><subject>Software</subject><issn>1548-7091</issn><issn>1548-7105</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp9kctKxDAUhoMo3l_AhRTcuKnmdnJxIQziFcFZ6DqkbVornVSTjjBvb7Q6XhYuQgLnO3_O4UNoj-Ajgpk6jpyApjmm6RABkPMVtEmAq1wSDKtfb6zJBtqK8QljxjiFdbTBBAUmOGwimC6uZ7ZxNyfZJOvaItiwyOo-ZK0fXBPs0PomG4nM-iqbLobH3u-gtdp20e1-3tvo4eL8_uwqv727vD6b3OYll3zIqa0lCElUWRZU8cJRjAuwmJQWLK8ttg7LAuqCK6krqApQtaw14UyJCjvKttHpmPs8L2auKp0fgu3Mc2hnaU7T29b8rvj20TT9q9FSMaFJCjj8DAj9y9zFwczaWLqus97182iopCCACIETevAHfernwaf1EsWI5lprlSg6UmXoYwyuXg5DsHm3YkYrJlkxH1YMT037P9dYtnxpSAAbgZhKvnHh--9_Yt8Ay4iW8w</recordid><startdate>20221101</startdate><enddate>20221101</enddate><creator>Rueden, Curtis T.</creator><creator>Hiner, Mark C.</creator><creator>Evans, Edward L.</creator><creator>Pinkert, Michael A.</creator><creator>Lucas, Alice M.</creator><creator>Carpenter, Anne E.</creator><creator>Cimini, Beth A.</creator><creator>Eliceiri, Kevin W.</creator><general>Nature Publishing Group US</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QO</scope><scope>7SS</scope><scope>7TK</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PCBAR</scope><scope>PDBOC</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-1555-8261</orcidid><orcidid>https://orcid.org/0000-0001-9640-9318</orcidid><orcidid>https://orcid.org/0000-0001-7055-6707</orcidid><orcidid>https://orcid.org/0000-0001-8678-670X</orcidid></search><sort><creationdate>20221101</creationdate><title>PyImageJ: A library for integrating ImageJ and Python</title><author>Rueden, Curtis T. ; Hiner, Mark C. ; Evans, Edward L. ; Pinkert, Michael A. ; Lucas, Alice M. ; Carpenter, Anne E. ; Cimini, Beth A. ; Eliceiri, Kevin W.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c474t-2af756718ccb284be200b5a01ca5a4fa0ae07b5fb4879d5db58f7f914386d0e23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>631/114/1564</topic><topic>631/114/2398</topic><topic>631/114/794</topic><topic>Algorithms</topic><topic>Bioinformatics</topic><topic>Biological Microscopy</topic><topic>Biological Techniques</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedical Engineering/Biotechnology</topic><topic>Correspondence</topic><topic>Gene Library</topic><topic>Life Sciences</topic><topic>Proteomics</topic><topic>Software</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rueden, Curtis T.</creatorcontrib><creatorcontrib>Hiner, Mark C.</creatorcontrib><creatorcontrib>Evans, Edward L.</creatorcontrib><creatorcontrib>Pinkert, Michael A.</creatorcontrib><creatorcontrib>Lucas, Alice M.</creatorcontrib><creatorcontrib>Carpenter, Anne E.</creatorcontrib><creatorcontrib>Cimini, Beth A.</creatorcontrib><creatorcontrib>Eliceiri, Kevin W.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science &amp; Engineering Collection</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central</collection><collection>Advanced Technologies &amp; Aerospace Collection</collection><collection>Agricultural &amp; Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Earth, Atmospheric &amp; Aquatic Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>ProQuest Engineering Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agriculture Science Database</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Engineering Database</collection><collection>ProQuest advanced technologies &amp; aerospace journals</collection><collection>ProQuest Advanced Technologies &amp; Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Earth, Atmospheric &amp; Aquatic Science Database</collection><collection>Materials Science Collection</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Engineering collection</collection><collection>Environmental Science Collection</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nature methods</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rueden, Curtis T.</au><au>Hiner, Mark C.</au><au>Evans, Edward L.</au><au>Pinkert, Michael A.</au><au>Lucas, Alice M.</au><au>Carpenter, Anne E.</au><au>Cimini, Beth A.</au><au>Eliceiri, Kevin W.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>PyImageJ: A library for integrating ImageJ and Python</atitle><jtitle>Nature methods</jtitle><stitle>Nat Methods</stitle><addtitle>Nat Methods</addtitle><date>2022-11-01</date><risdate>2022</risdate><volume>19</volume><issue>11</issue><spage>1326</spage><epage>1327</epage><pages>1326-1327</pages><issn>1548-7091</issn><eissn>1548-7105</eissn><cop>New York</cop><pub>Nature Publishing Group US</pub><pmid>36253645</pmid><doi>10.1038/s41592-022-01655-4</doi><tpages>2</tpages><orcidid>https://orcid.org/0000-0003-1555-8261</orcidid><orcidid>https://orcid.org/0000-0001-9640-9318</orcidid><orcidid>https://orcid.org/0000-0001-7055-6707</orcidid><orcidid>https://orcid.org/0000-0001-8678-670X</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1548-7091
ispartof Nature methods, 2022-11, Vol.19 (11), p.1326-1327
issn 1548-7091
1548-7105
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_9783691
source MEDLINE; Nature; SpringerLink (Online service)
subjects 631/114/1564
631/114/2398
631/114/794
Algorithms
Bioinformatics
Biological Microscopy
Biological Techniques
Biomedical and Life Sciences
Biomedical Engineering/Biotechnology
Correspondence
Gene Library
Life Sciences
Proteomics
Software
title PyImageJ: A library for integrating ImageJ and Python
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-27T20%3A20%3A20IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=PyImageJ:%20A%20library%20for%20integrating%20ImageJ%20and%20Python&rft.jtitle=Nature%20methods&rft.au=Rueden,%20Curtis%20T.&rft.date=2022-11-01&rft.volume=19&rft.issue=11&rft.spage=1326&rft.epage=1327&rft.pages=1326-1327&rft.issn=1548-7091&rft.eissn=1548-7105&rft_id=info:doi/10.1038/s41592-022-01655-4&rft_dat=%3Cproquest_pubme%3E2725651660%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2731949998&rft_id=info:pmid/36253645&rfr_iscdi=true