Metagenome-Assembled Genomes for " Candidatus Phormidium sp. Strain AB48" and Co-occurring Microorganisms from an Industrial Photobioreactor Environment
Here, we report metagenome-assembled genomes for " Phormidium sp. strain AB48" and three cooccurring microorganisms from a biofilm-forming industrial photobioreactor environment, using the PacBio sequencing platform. Several mobile genetic elements, including a double-stranded DNA phage an...
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| Veröffentlicht in: | Microbiology resource announcements 2022-12, Vol.11 (12), p.e0044722-e0044722 |
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| container_end_page | e0044722 |
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| container_issue | 12 |
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| container_title | Microbiology resource announcements |
| container_volume | 11 |
| creator | Noonan, Avery J C Qiu, Yilin Kieft, Brandon Formby, Sean Liu, Tony Dofher, Kalen Koch, Moritz Hallam, Steven J |
| description | Here, we report metagenome-assembled genomes for "
Phormidium sp. strain AB48" and three cooccurring microorganisms from a biofilm-forming industrial photobioreactor environment, using the PacBio sequencing platform. Several mobile genetic elements, including a double-stranded DNA phage and plasmids, were also recovered, with the potential to mediate gene transfer within the biofilm community. |
| doi_str_mv | 10.1128/mra.00447-22 |
| format | Article |
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Phormidium sp. strain AB48" and three cooccurring microorganisms from a biofilm-forming industrial photobioreactor environment, using the PacBio sequencing platform. Several mobile genetic elements, including a double-stranded DNA phage and plasmids, were also recovered, with the potential to mediate gene transfer within the biofilm community.</description><subject>Applied and Industrial Microbiology</subject><subject>BASIC BIOLOGICAL SCIENCES</subject><subject>Genome Sequences</subject><issn>2576-098X</issn><issn>2576-098X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNp1ksFrFDEUxgdRbKm9eZawJwVnzSSTSeYirEttCy0KKngLmeTNbsokWZNMwf_EP9dsty314Ckh7-P33vu-VNXrBi-bhogPLqolxm3La0KeVceE8a7Gvfj5_Mn9qDpN6QZjTHAr-o6-rI5o1-K-wfy4-nMNWW3ABwf1KiVwwwQGnd89JDSGiBZorbyxRuU5oa_bEJ01dnYo7ZboW47KerT61IoFKiq0DnXQeo7R-g26tjqGEDfK2-QKLAZXROjSmznlaNW0x-Uw2BBB6Vx6nflbG4N34POr6sWopgSn9-dJ9ePz2ff1RX315fxyvbqqVduyXFPG-Mi5Ii0IgrkhbKQAbdcIM5imI6CwYWQsFWBGUCMaRsdhYITgXmku6En18cDdzYMDo0vrqCa5i9ap-FsGZeW_FW-3chNuZc8Z7XpeAIsDIKRsZdI2g97q4D3oLAnlxXRSRG_vu8Twa4aUpbNJwzQpD2FOknAqSjiC7gd6f5AW81KKMD7O0mC5D12W0OVd6JLsye8OcpUckTdhjr7Y9T_tm6e7PoIfvgP9C8N1t6I</recordid><startdate>20221215</startdate><enddate>20221215</enddate><creator>Noonan, Avery J C</creator><creator>Qiu, Yilin</creator><creator>Kieft, Brandon</creator><creator>Formby, Sean</creator><creator>Liu, Tony</creator><creator>Dofher, Kalen</creator><creator>Koch, Moritz</creator><creator>Hallam, Steven J</creator><general>American Society for Microbiology</general><general>SSPA - American Society for Microbiology</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>OIOZB</scope><scope>OTOTI</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-4889-6876</orcidid><orcidid>https://orcid.org/0000-0002-9039-8379</orcidid><orcidid>https://orcid.org/0000000248896876</orcidid><orcidid>https://orcid.org/0000000290398379</orcidid></search><sort><creationdate>20221215</creationdate><title>Metagenome-Assembled Genomes for " Candidatus Phormidium sp. Strain AB48" and Co-occurring Microorganisms from an Industrial Photobioreactor Environment</title><author>Noonan, Avery J C ; Qiu, Yilin ; Kieft, Brandon ; Formby, Sean ; Liu, Tony ; Dofher, Kalen ; Koch, Moritz ; Hallam, Steven J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a445t-3557f77a24e8207d25f3ee4618dbd162ea0d52f07de5d83d8153fbb52209ac783</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Applied and Industrial Microbiology</topic><topic>BASIC BIOLOGICAL SCIENCES</topic><topic>Genome Sequences</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Noonan, Avery J C</creatorcontrib><creatorcontrib>Qiu, Yilin</creatorcontrib><creatorcontrib>Kieft, Brandon</creatorcontrib><creatorcontrib>Formby, Sean</creatorcontrib><creatorcontrib>Liu, Tony</creatorcontrib><creatorcontrib>Dofher, Kalen</creatorcontrib><creatorcontrib>Koch, Moritz</creatorcontrib><creatorcontrib>Hallam, Steven J</creatorcontrib><creatorcontrib>Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV - Hybrid</collection><collection>OSTI.GOV</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Microbiology resource announcements</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Noonan, Avery J C</au><au>Qiu, Yilin</au><au>Kieft, Brandon</au><au>Formby, Sean</au><au>Liu, Tony</au><au>Dofher, Kalen</au><au>Koch, Moritz</au><au>Hallam, Steven J</au><au>Newton, Irene L. G.</au><aucorp>Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Metagenome-Assembled Genomes for " Candidatus Phormidium sp. Strain AB48" and Co-occurring Microorganisms from an Industrial Photobioreactor Environment</atitle><jtitle>Microbiology resource announcements</jtitle><stitle>Microbiol Resour Announc</stitle><addtitle>Microbiol Resour Announc</addtitle><date>2022-12-15</date><risdate>2022</risdate><volume>11</volume><issue>12</issue><spage>e0044722</spage><epage>e0044722</epage><pages>e0044722-e0044722</pages><issn>2576-098X</issn><eissn>2576-098X</eissn><abstract>Here, we report metagenome-assembled genomes for "
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| subjects | Applied and Industrial Microbiology BASIC BIOLOGICAL SCIENCES Genome Sequences |
| title | Metagenome-Assembled Genomes for " Candidatus Phormidium sp. Strain AB48" and Co-occurring Microorganisms from an Industrial Photobioreactor Environment |
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