Field‐based adipose tissue quantification in sea turtles using bioelectrical impedance spectroscopy validated with CT scans and deep learning

Loss of adipose tissue in vertebrate wildlife species is indicative of decreased nutritional and health status and is linked to environmental stress and diseases. Body condition indices (BCI) are commonly used in ecological studies to estimate adipose tissue mass across wildlife populations. However...

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Veröffentlicht in:Ecology and evolution 2022-12, Vol.12 (12), p.e9610-n/a
Hauptverfasser: Kophamel, Sara, Ward, Leigh C., Konovalov, Dmitry A., Mendez, Diana, Ariel, Ellen, Cassidy, Nathan, Bell, Ian, Balastegui Martínez, María T., Munns, Suzanne L.
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container_issue 12
container_start_page e9610
container_title Ecology and evolution
container_volume 12
creator Kophamel, Sara
Ward, Leigh C.
Konovalov, Dmitry A.
Mendez, Diana
Ariel, Ellen
Cassidy, Nathan
Bell, Ian
Balastegui Martínez, María T.
Munns, Suzanne L.
description Loss of adipose tissue in vertebrate wildlife species is indicative of decreased nutritional and health status and is linked to environmental stress and diseases. Body condition indices (BCI) are commonly used in ecological studies to estimate adipose tissue mass across wildlife populations. However, these indices have poor predictive power, which poses the need for quantitative methods for improved population assessments. Here, we calibrate bioelectrical impedance spectroscopy (BIS) as an alternative approach for assessing the nutritional status of vertebrate wildlife in ecological studies. BIS is a portable technology that can estimate body composition from measurements of body impedance and is widely used in humans. BIS is a predictive technique that requires calibration using a reference body composition method. Using sea turtles as model organisms, we propose a calibration protocol using computed tomography (CT) scans, with the prediction equation being: adipose tissue mass (kg) = body mass − (−0.03 [intercept] − 0.29 * length2/resistance at 50 kHz + 1.07 * body mass − 0.11 * time after capture). CT imaging allows for the quantification of body fat. However, processing the images manually is prohibitive due to the extensive time requirement. Using a form of artificial intelligence (AI), we trained a computer model to identify and quantify nonadipose tissue from the CT images, and adipose tissue was determined by the difference in body mass. This process enabled estimating adipose tissue mass from bioelectrical impedance measurements. The predictive performance of the model was built on 2/3 samples and tested against 1/3 samples. Prediction of adipose tissue percentage had greater accuracy when including impedance parameters (mean bias = 0.11%–0.61%) as predictor variables, compared with using body mass alone (mean bias = 6.35%). Our standardized BIS protocol improves on conventional body composition assessment methods (e.g., BCI) by quantifying adipose tissue mass. The protocol can be applied to other species for the validation of BIS and to provide robust information on the nutritional and health status of wildlife, which, in turn, can be used to inform conservation decisions at the management level. Loss of body fat (i.e., adipose tissue) in vertebrate wildlife species is indicative of decreased nutritional and health status and is linked to environmental stress and diseases. Here, we calibrate bioelectrical impedance spectroscopy (BIS) for assessin
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Body condition indices (BCI) are commonly used in ecological studies to estimate adipose tissue mass across wildlife populations. However, these indices have poor predictive power, which poses the need for quantitative methods for improved population assessments. Here, we calibrate bioelectrical impedance spectroscopy (BIS) as an alternative approach for assessing the nutritional status of vertebrate wildlife in ecological studies. BIS is a portable technology that can estimate body composition from measurements of body impedance and is widely used in humans. BIS is a predictive technique that requires calibration using a reference body composition method. Using sea turtles as model organisms, we propose a calibration protocol using computed tomography (CT) scans, with the prediction equation being: adipose tissue mass (kg) = body mass − (−0.03 [intercept] − 0.29 * length2/resistance at 50 kHz + 1.07 * body mass − 0.11 * time after capture). CT imaging allows for the quantification of body fat. However, processing the images manually is prohibitive due to the extensive time requirement. Using a form of artificial intelligence (AI), we trained a computer model to identify and quantify nonadipose tissue from the CT images, and adipose tissue was determined by the difference in body mass. This process enabled estimating adipose tissue mass from bioelectrical impedance measurements. The predictive performance of the model was built on 2/3 samples and tested against 1/3 samples. Prediction of adipose tissue percentage had greater accuracy when including impedance parameters (mean bias = 0.11%–0.61%) as predictor variables, compared with using body mass alone (mean bias = 6.35%). Our standardized BIS protocol improves on conventional body composition assessment methods (e.g., BCI) by quantifying adipose tissue mass. The protocol can be applied to other species for the validation of BIS and to provide robust information on the nutritional and health status of wildlife, which, in turn, can be used to inform conservation decisions at the management level. Loss of body fat (i.e., adipose tissue) in vertebrate wildlife species is indicative of decreased nutritional and health status and is linked to environmental stress and diseases. Here, we calibrate bioelectrical impedance spectroscopy (BIS) for assessing the nutritional status of sea turtles. Using a form of artificial intelligence, we trained a computer model to identify and quantify body fat from computed tomography scans, which enabled estimating body fat from the BIS measurements. 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Ecology and Evolution published by John Wiley &amp; Sons Ltd.</rights><rights>2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4430-d32c81bdc75f6a48b2dda375d956a06e3ca3a6f2cef0e850a421cdd6aecd21f23</citedby><cites>FETCH-LOGICAL-c4430-d32c81bdc75f6a48b2dda375d956a06e3ca3a6f2cef0e850a421cdd6aecd21f23</cites><orcidid>0000-0001-5200-0107</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9748411/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9748411/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,1411,11541,27901,27902,45550,45551,46027,46451,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36523527$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kophamel, Sara</creatorcontrib><creatorcontrib>Ward, Leigh C.</creatorcontrib><creatorcontrib>Konovalov, Dmitry A.</creatorcontrib><creatorcontrib>Mendez, Diana</creatorcontrib><creatorcontrib>Ariel, Ellen</creatorcontrib><creatorcontrib>Cassidy, Nathan</creatorcontrib><creatorcontrib>Bell, Ian</creatorcontrib><creatorcontrib>Balastegui Martínez, María T.</creatorcontrib><creatorcontrib>Munns, Suzanne L.</creatorcontrib><title>Field‐based adipose tissue quantification in sea turtles using bioelectrical impedance spectroscopy validated with CT scans and deep learning</title><title>Ecology and evolution</title><addtitle>Ecol Evol</addtitle><description>Loss of adipose tissue in vertebrate wildlife species is indicative of decreased nutritional and health status and is linked to environmental stress and diseases. Body condition indices (BCI) are commonly used in ecological studies to estimate adipose tissue mass across wildlife populations. However, these indices have poor predictive power, which poses the need for quantitative methods for improved population assessments. Here, we calibrate bioelectrical impedance spectroscopy (BIS) as an alternative approach for assessing the nutritional status of vertebrate wildlife in ecological studies. BIS is a portable technology that can estimate body composition from measurements of body impedance and is widely used in humans. BIS is a predictive technique that requires calibration using a reference body composition method. Using sea turtles as model organisms, we propose a calibration protocol using computed tomography (CT) scans, with the prediction equation being: adipose tissue mass (kg) = body mass − (−0.03 [intercept] − 0.29 * length2/resistance at 50 kHz + 1.07 * body mass − 0.11 * time after capture). CT imaging allows for the quantification of body fat. However, processing the images manually is prohibitive due to the extensive time requirement. Using a form of artificial intelligence (AI), we trained a computer model to identify and quantify nonadipose tissue from the CT images, and adipose tissue was determined by the difference in body mass. This process enabled estimating adipose tissue mass from bioelectrical impedance measurements. The predictive performance of the model was built on 2/3 samples and tested against 1/3 samples. Prediction of adipose tissue percentage had greater accuracy when including impedance parameters (mean bias = 0.11%–0.61%) as predictor variables, compared with using body mass alone (mean bias = 6.35%). Our standardized BIS protocol improves on conventional body composition assessment methods (e.g., BCI) by quantifying adipose tissue mass. The protocol can be applied to other species for the validation of BIS and to provide robust information on the nutritional and health status of wildlife, which, in turn, can be used to inform conservation decisions at the management level. Loss of body fat (i.e., adipose tissue) in vertebrate wildlife species is indicative of decreased nutritional and health status and is linked to environmental stress and diseases. Here, we calibrate bioelectrical impedance spectroscopy (BIS) for assessing the nutritional status of sea turtles. Using a form of artificial intelligence, we trained a computer model to identify and quantify body fat from computed tomography scans, which enabled estimating body fat from the BIS measurements. 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Body condition indices (BCI) are commonly used in ecological studies to estimate adipose tissue mass across wildlife populations. However, these indices have poor predictive power, which poses the need for quantitative methods for improved population assessments. Here, we calibrate bioelectrical impedance spectroscopy (BIS) as an alternative approach for assessing the nutritional status of vertebrate wildlife in ecological studies. BIS is a portable technology that can estimate body composition from measurements of body impedance and is widely used in humans. BIS is a predictive technique that requires calibration using a reference body composition method. Using sea turtles as model organisms, we propose a calibration protocol using computed tomography (CT) scans, with the prediction equation being: adipose tissue mass (kg) = body mass − (−0.03 [intercept] − 0.29 * length2/resistance at 50 kHz + 1.07 * body mass − 0.11 * time after capture). CT imaging allows for the quantification of body fat. However, processing the images manually is prohibitive due to the extensive time requirement. Using a form of artificial intelligence (AI), we trained a computer model to identify and quantify nonadipose tissue from the CT images, and adipose tissue was determined by the difference in body mass. This process enabled estimating adipose tissue mass from bioelectrical impedance measurements. The predictive performance of the model was built on 2/3 samples and tested against 1/3 samples. Prediction of adipose tissue percentage had greater accuracy when including impedance parameters (mean bias = 0.11%–0.61%) as predictor variables, compared with using body mass alone (mean bias = 6.35%). Our standardized BIS protocol improves on conventional body composition assessment methods (e.g., BCI) by quantifying adipose tissue mass. The protocol can be applied to other species for the validation of BIS and to provide robust information on the nutritional and health status of wildlife, which, in turn, can be used to inform conservation decisions at the management level. Loss of body fat (i.e., adipose tissue) in vertebrate wildlife species is indicative of decreased nutritional and health status and is linked to environmental stress and diseases. Here, we calibrate bioelectrical impedance spectroscopy (BIS) for assessing the nutritional status of sea turtles. Using a form of artificial intelligence, we trained a computer model to identify and quantify body fat from computed tomography scans, which enabled estimating body fat from the BIS measurements. Our standardized BIS protocol can be applied to other species and taxa and improves on conventional body composition assessment methods (e.g., body condition indices) by accurately estimating body fat.</abstract><cop>England</cop><pub>John Wiley &amp; Sons, Inc</pub><pmid>36523527</pmid><doi>10.1002/ece3.9610</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0001-5200-0107</orcidid><oa>free_for_read</oa></addata></record>
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subjects Adipose tissue
Aquatic reptiles
Artificial intelligence
Automation
Bias
Bioelectricity
Bland–Altman
Body composition
body condition
Body fat
Body mass
Body size
Calibration
Computed tomography
Deep learning
Ecoinformatics
Ecological studies
Ecophysiology
Electric currents
Electrodes
Environmental protection
Environmental stress
Impedance
Impedance spectroscopy
Laboratory animals
Medical imaging
Nutrition assessment
Nutritional status
Performance prediction
Population
sea turtle
Sea turtles
Spectroscopy
Spectrum analysis
Vertebrates
Wildlife
Wildlife conservation
Wildlife management
title Field‐based adipose tissue quantification in sea turtles using bioelectrical impedance spectroscopy validated with CT scans and deep learning
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