Metagenome analysis using the Kraken software suite

Metagenomic experiments expose the wide range of microscopic organisms in any microbial environment through high-throughput DNA sequencing. The computational analysis of the sequencing data is critical for the accurate and complete characterization of the microbial community. To facilitate efficient...

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Veröffentlicht in:	Nature protocols 2022-12, Vol.17 (12), p.2815-2839
Hauptverfasser:	Lu, Jennifer, Rincon, Natalia, Wood, Derrick E., Breitwieser, Florian P., Pockrandt, Christopher, Langmead, Ben, Salzberg, Steven L., Steinegger, Martin
Format:	Artikel
Sprache:	eng
Schlagworte:	631/1647/48 631/1647/794 631/208/212/2142 Analytical Chemistry Antibiotics Biological Techniques Biomedical and Life Sciences Classification Computational Biology/Bioinformatics Computer applications Cornea DNA sequencing Experiments Feces Genetic testing Genomes High-Throughput Nucleotide Sequencing - methods Humans Identification Infections Life Sciences Metagenome Metagenomics Metagenomics - methods Microarrays Microbiomes Microbiota - genetics Microorganisms Organic Chemistry Pathogens Protocol Sequence Analysis, DNA - methods Software Taxonomy UNIX Visualization
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