Complete Genome of Sphingomonas aerolata PDD-32b-11, Isolated from Cloud Water at the Summit of Puy de Dôme, France

Complete Genome of Sphingomonas aerolata PDD-32b-11, Isolated from Cloud Water at the Summit of Puy de Dôme, France

The complete genome of Sphingomonas aerolata PDD-32b-11, a bacterium isolated from cloud water, was sequenced. It features four circular replicons, a chromosome of 3.99 Mbp, and three plasmids. Two putative rhodopsin-encoding genes were detected which might act as proton pumps to harvest light energ...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Microbiology resource announcements 2022-10, Vol.11 (10), p.e0068422-e0068422
Hauptverfasser: Jarrige, Domitille, Nadalig, Thierry, Joly, Muriel, Sancelme, Martine, Vuilleumier, Stéphane, Amato, Pierre, Bringel, Françoise
Format: Artikel
Sprache:eng
Schlagworte:
Environmental Microbiology
Environmental Sciences
Genome Sequences
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page e0068422
container_issue 10
container_start_page e0068422
container_title Microbiology resource announcements
container_volume 11
creator Jarrige, Domitille
Nadalig, Thierry
Joly, Muriel
Sancelme, Martine
Vuilleumier, Stéphane
Amato, Pierre
Bringel, Françoise
description The complete genome of Sphingomonas aerolata PDD-32b-11, a bacterium isolated from cloud water, was sequenced. It features four circular replicons, a chromosome of 3.99 Mbp, and three plasmids. Two putative rhodopsin-encoding genes were detected which might act as proton pumps to harvest light energy.
doi_str_mv 10.1128/mra.00684-22
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_9584328</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2714657810</sourcerecordid><originalsourceid>FETCH-LOGICAL-a386t-896e8473ceec0ffb2c3d3359c51224bce90a5c502caf3e2eab9ba3ee76558db3</originalsourceid><addsrcrecordid>eNptkdtKJDEQhoO4rOJ65wPk0oVpN4dOd_pmQWY8wcAKCnoXqtPVTkunMyZpwffaN9gXs8cR98BeVfHnr6-K_IQccXbCudDfXIATxgqdZ0LskH2hyiJjlb7f_aPfI4cxPjLGBMt1VcjPZE8WfBqq2D5Jc-_WPSakFzh4h9S39Ga96oYH7_wAkQIG30MCer1YZFLUGeczehU3Gja0Dd7Ree_Hht5NQqCQaFohvRmd69IGdj2-0Abp4tdPhzN6HmCw-IV8aqGPePheD8jt-dnt_DJb_ri4mp8uM5C6SNl0LOq8lBbRsrathZWNlKqyiguR1xYrBsoqJiy0EgVCXdUgEctCKd3U8oB832LXY-2wsTikAL1Zh85BeDEeOvP3y9CtzIN_NpXSuRR6AnzdAlb_jF2eLs1GY1KzQpb5M5-8x-_Lgn8aMSbjumix72FAP0YjSp4XqtScTdbZ1mqDjzFg-8HmzGxiNVOs5i1WI8TvKyA6YR79GIbp0_7vfQVSeKFn</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2714657810</pqid></control><display><type>article</type><title>Complete Genome of Sphingomonas aerolata PDD-32b-11, Isolated from Cloud Water at the Summit of Puy de Dôme, France</title><source>PubMed Central</source><creator>Jarrige, Domitille ; Nadalig, Thierry ; Joly, Muriel ; Sancelme, Martine ; Vuilleumier, Stéphane ; Amato, Pierre ; Bringel, Françoise</creator><contributor>Cameron Thrash, J.</contributor><creatorcontrib>Jarrige, Domitille ; Nadalig, Thierry ; Joly, Muriel ; Sancelme, Martine ; Vuilleumier, Stéphane ; Amato, Pierre ; Bringel, Françoise ; Cameron Thrash, J.</creatorcontrib><description>The complete genome of Sphingomonas aerolata PDD-32b-11, a bacterium isolated from cloud water, was sequenced. It features four circular replicons, a chromosome of 3.99 Mbp, and three plasmids. Two putative rhodopsin-encoding genes were detected which might act as proton pumps to harvest light energy.</description><identifier>ISSN: 2576-098X</identifier><identifier>EISSN: 2576-098X</identifier><identifier>DOI: 10.1128/mra.00684-22</identifier><identifier>PMID: 36106890</identifier><language>eng</language><publisher>1752 N St., N.W., Washington, DC: American Society for Microbiology</publisher><subject>Environmental Microbiology ; Environmental Sciences ; Genome Sequences</subject><ispartof>Microbiology resource announcements, 2022-10, Vol.11 (10), p.e0068422-e0068422</ispartof><rights>Copyright © 2022 Jarrige et al.</rights><rights>Attribution</rights><rights>Copyright © 2022 Jarrige et al. 2022 Jarrige et al.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-a386t-896e8473ceec0ffb2c3d3359c51224bce90a5c502caf3e2eab9ba3ee76558db3</cites><orcidid>0000-0002-5476-5960 ; 0000-0003-2232-7023 ; 0000-0002-7060-9618 ; 0000-0003-3168-0398 ; 0000-0002-4529-5143 ; 0000-0002-0633-8999 ; 0000-0003-3486-0714</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9584328/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9584328/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://hal.science/hal-03806374$$DView record in HAL$$Hfree_for_read</backlink></links><search><contributor>Cameron Thrash, J.</contributor><creatorcontrib>Jarrige, Domitille</creatorcontrib><creatorcontrib>Nadalig, Thierry</creatorcontrib><creatorcontrib>Joly, Muriel</creatorcontrib><creatorcontrib>Sancelme, Martine</creatorcontrib><creatorcontrib>Vuilleumier, Stéphane</creatorcontrib><creatorcontrib>Amato, Pierre</creatorcontrib><creatorcontrib>Bringel, Françoise</creatorcontrib><title>Complete Genome of Sphingomonas aerolata PDD-32b-11, Isolated from Cloud Water at the Summit of Puy de Dôme, France</title><title>Microbiology resource announcements</title><addtitle>Microbiol Resour Announc</addtitle><description>The complete genome of Sphingomonas aerolata PDD-32b-11, a bacterium isolated from cloud water, was sequenced. It features four circular replicons, a chromosome of 3.99 Mbp, and three plasmids. Two putative rhodopsin-encoding genes were detected which might act as proton pumps to harvest light energy.</description><subject>Environmental Microbiology</subject><subject>Environmental Sciences</subject><subject>Genome Sequences</subject><issn>2576-098X</issn><issn>2576-098X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNptkdtKJDEQhoO4rOJ65wPk0oVpN4dOd_pmQWY8wcAKCnoXqtPVTkunMyZpwffaN9gXs8cR98BeVfHnr6-K_IQccXbCudDfXIATxgqdZ0LskH2hyiJjlb7f_aPfI4cxPjLGBMt1VcjPZE8WfBqq2D5Jc-_WPSakFzh4h9S39Ga96oYH7_wAkQIG30MCer1YZFLUGeczehU3Gja0Dd7Ree_Hht5NQqCQaFohvRmd69IGdj2-0Abp4tdPhzN6HmCw-IV8aqGPePheD8jt-dnt_DJb_ri4mp8uM5C6SNl0LOq8lBbRsrathZWNlKqyiguR1xYrBsoqJiy0EgVCXdUgEctCKd3U8oB832LXY-2wsTikAL1Zh85BeDEeOvP3y9CtzIN_NpXSuRR6AnzdAlb_jF2eLs1GY1KzQpb5M5-8x-_Lgn8aMSbjumix72FAP0YjSp4XqtScTdbZ1mqDjzFg-8HmzGxiNVOs5i1WI8TvKyA6YR79GIbp0_7vfQVSeKFn</recordid><startdate>20221020</startdate><enddate>20221020</enddate><creator>Jarrige, Domitille</creator><creator>Nadalig, Thierry</creator><creator>Joly, Muriel</creator><creator>Sancelme, Martine</creator><creator>Vuilleumier, Stéphane</creator><creator>Amato, Pierre</creator><creator>Bringel, Françoise</creator><general>American Society for Microbiology</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-5476-5960</orcidid><orcidid>https://orcid.org/0000-0003-2232-7023</orcidid><orcidid>https://orcid.org/0000-0002-7060-9618</orcidid><orcidid>https://orcid.org/0000-0003-3168-0398</orcidid><orcidid>https://orcid.org/0000-0002-4529-5143</orcidid><orcidid>https://orcid.org/0000-0002-0633-8999</orcidid><orcidid>https://orcid.org/0000-0003-3486-0714</orcidid></search><sort><creationdate>20221020</creationdate><title>Complete Genome of Sphingomonas aerolata PDD-32b-11, Isolated from Cloud Water at the Summit of Puy de Dôme, France</title><author>Jarrige, Domitille ; Nadalig, Thierry ; Joly, Muriel ; Sancelme, Martine ; Vuilleumier, Stéphane ; Amato, Pierre ; Bringel, Françoise</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a386t-896e8473ceec0ffb2c3d3359c51224bce90a5c502caf3e2eab9ba3ee76558db3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Environmental Microbiology</topic><topic>Environmental Sciences</topic><topic>Genome Sequences</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jarrige, Domitille</creatorcontrib><creatorcontrib>Nadalig, Thierry</creatorcontrib><creatorcontrib>Joly, Muriel</creatorcontrib><creatorcontrib>Sancelme, Martine</creatorcontrib><creatorcontrib>Vuilleumier, Stéphane</creatorcontrib><creatorcontrib>Amato, Pierre</creatorcontrib><creatorcontrib>Bringel, Françoise</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Microbiology resource announcements</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jarrige, Domitille</au><au>Nadalig, Thierry</au><au>Joly, Muriel</au><au>Sancelme, Martine</au><au>Vuilleumier, Stéphane</au><au>Amato, Pierre</au><au>Bringel, Françoise</au><au>Cameron Thrash, J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Complete Genome of Sphingomonas aerolata PDD-32b-11, Isolated from Cloud Water at the Summit of Puy de Dôme, France</atitle><jtitle>Microbiology resource announcements</jtitle><stitle>Microbiol Resour Announc</stitle><date>2022-10-20</date><risdate>2022</risdate><volume>11</volume><issue>10</issue><spage>e0068422</spage><epage>e0068422</epage><pages>e0068422-e0068422</pages><issn>2576-098X</issn><eissn>2576-098X</eissn><abstract>The complete genome of Sphingomonas aerolata PDD-32b-11, a bacterium isolated from cloud water, was sequenced. It features four circular replicons, a chromosome of 3.99 Mbp, and three plasmids. Two putative rhodopsin-encoding genes were detected which might act as proton pumps to harvest light energy.</abstract><cop>1752 N St., N.W., Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>36106890</pmid><doi>10.1128/mra.00684-22</doi><tpages>4</tpages><orcidid>https://orcid.org/0000-0002-5476-5960</orcidid><orcidid>https://orcid.org/0000-0003-2232-7023</orcidid><orcidid>https://orcid.org/0000-0002-7060-9618</orcidid><orcidid>https://orcid.org/0000-0003-3168-0398</orcidid><orcidid>https://orcid.org/0000-0002-4529-5143</orcidid><orcidid>https://orcid.org/0000-0002-0633-8999</orcidid><orcidid>https://orcid.org/0000-0003-3486-0714</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2576-098X
ispartof Microbiology resource announcements, 2022-10, Vol.11 (10), p.e0068422-e0068422
issn 2576-098X
2576-098X
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_9584328
source PubMed Central
subjects Environmental Microbiology
Environmental Sciences
Genome Sequences
title Complete Genome of Sphingomonas aerolata PDD-32b-11, Isolated from Cloud Water at the Summit of Puy de Dôme, France
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-29T18%3A08%3A04IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Complete%20Genome%20of%20Sphingomonas%20aerolata%20PDD-32b-11,%20Isolated%20from%20Cloud%20Water%20at%20the%20Summit%20of%20Puy%20de%20D%C3%B4me,%20France&rft.jtitle=Microbiology%20resource%20announcements&rft.au=Jarrige,%20Domitille&rft.date=2022-10-20&rft.volume=11&rft.issue=10&rft.spage=e0068422&rft.epage=e0068422&rft.pages=e0068422-e0068422&rft.issn=2576-098X&rft.eissn=2576-098X&rft_id=info:doi/10.1128/mra.00684-22&rft_dat=%3Cproquest_pubme%3E2714657810%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2714657810&rft_id=info:pmid/36106890&rfr_iscdi=true