Genetic and clinical determinants of abdominal aortic diameter: genome-wide association studies, exome array data and Mendelian randomization study
Progressive dilation of the infrarenal aortic diameter is a consequence of the ageing process and is considered the main determinant of abdominal aortic aneurysm (AAA). We aimed to investigate the genetic and clinical determinants of abdominal aortic diameter (AAD). We conducted a meta-analysis of g...
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creator | Portilla-Fernandez, Eliana Klarin, Derek Hwang, Shih-Jen Biggs, Mary L Bis, Joshua C Weiss, Stefan Rospleszcz, Susanne Natarajan, Pradeep Hoffmann, Udo Rogers, Ian S Truong, Quynh A Völker, Uwe Dörr, Marcus Bülow, Robin Criqui, Michael H Allison, Matthew Ganesh, Santhi K Yao, Jie Waldenberger, Melanie Bamberg, Fabian Rice, Kenneth M Essers, Jeroen Kapteijn, Daniek M C van der Laan, Sander W de Knegt, Rob J Ghanbari, Mohsen Felix, Janine F Ikram, M Arfan Kavousi, Maryam Uitterlinden, Andre G Roks, Anton J M Danser, A H Jan Tsao, Philip S Damrauer, Scott M Guo, Xiuqing Rotter, Jerome I Psaty, Bruce M Kathiresan, Sekar Völzke, Henry Peters, Annette Johnson, Craig Strauch, Konstantin Meitinger, Thomas O'Donnell, Christopher J Dehghan, Abbas |
description | Progressive dilation of the infrarenal aortic diameter is a consequence of the ageing process and is considered the main determinant of abdominal aortic aneurysm (AAA). We aimed to investigate the genetic and clinical determinants of abdominal aortic diameter (AAD). We conducted a meta-analysis of genome-wide association studies in 10 cohorts (n = 13 542) imputed to the 1000 Genome Project reference panel including 12 815 subjects in the discovery phase and 727 subjects [Partners Biobank cohort 1 (PBIO)] as replication. Maximum anterior-posterior diameter of the infrarenal aorta was used as AAD. We also included exome array data (n = 14 480) from seven epidemiologic studies. Single-variant and gene-based associations were done using SeqMeta package. A Mendelian randomization analysis was applied to investigate the causal effect of a number of clinical risk factors on AAD. In genome-wide association study (GWAS) on AAD, rs74448815 in the intronic region of LDLRAD4 reached genome-wide significance (beta = -0.02, SE = 0.004, P-value = 2.10 × 10-8). The association replicated in the PBIO1 cohort (P-value = 8.19 × 10-4). In exome-array single-variant analysis (P-value threshold = 9 × 10-7), the lowest P-value was found for rs239259 located in SLC22A20 (beta = 0.007, P-value = 1.2 × 10-5). In the gene-based analysis (P-value threshold = 1.85 × 10-6), PCSK5 showed an association with AAD (P-value = 8.03 × 10-7). Furthermore, in Mendelian randomization analyses, we found evidence for genetic association of pulse pressure (beta = -0.003, P-value = 0.02), triglycerides (beta = -0.16, P-value = 0.008) and height (beta = 0.03, P-value |
doi_str_mv | 10.1093/hmg/ddac051 |
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We aimed to investigate the genetic and clinical determinants of abdominal aortic diameter (AAD). We conducted a meta-analysis of genome-wide association studies in 10 cohorts (n = 13 542) imputed to the 1000 Genome Project reference panel including 12 815 subjects in the discovery phase and 727 subjects [Partners Biobank cohort 1 (PBIO)] as replication. Maximum anterior-posterior diameter of the infrarenal aorta was used as AAD. We also included exome array data (n = 14 480) from seven epidemiologic studies. Single-variant and gene-based associations were done using SeqMeta package. A Mendelian randomization analysis was applied to investigate the causal effect of a number of clinical risk factors on AAD. In genome-wide association study (GWAS) on AAD, rs74448815 in the intronic region of LDLRAD4 reached genome-wide significance (beta = -0.02, SE = 0.004, P-value = 2.10 × 10-8). The association replicated in the PBIO1 cohort (P-value = 8.19 × 10-4). In exome-array single-variant analysis (P-value threshold = 9 × 10-7), the lowest P-value was found for rs239259 located in SLC22A20 (beta = 0.007, P-value = 1.2 × 10-5). In the gene-based analysis (P-value threshold = 1.85 × 10-6), PCSK5 showed an association with AAD (P-value = 8.03 × 10-7). Furthermore, in Mendelian randomization analyses, we found evidence for genetic association of pulse pressure (beta = -0.003, P-value = 0.02), triglycerides (beta = -0.16, P-value = 0.008) and height (beta = 0.03, P-value < 0.0001), known risk factors for AAA, consistent with a causal association with AAD. Our findings point to new biology as well as highlighting gene regions in mechanisms that have previously been implicated in the genetics of other vascular diseases.</description><identifier>ISSN: 0964-6906</identifier><identifier>EISSN: 1460-2083</identifier><identifier>DOI: 10.1093/hmg/ddac051</identifier><identifier>PMID: 35234888</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Association Studies ; Exome - genetics ; Genome-Wide Association Study ; Humans ; Mendelian Randomization Analysis ; Polymorphism, Single Nucleotide - genetics ; Triglycerides</subject><ispartof>Human molecular genetics, 2022-10, Vol.31 (20), p.3566-3579</ispartof><rights>The Author(s) 2022. Published by Oxford University Press.</rights><rights>The Author(s) 2022. 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We aimed to investigate the genetic and clinical determinants of abdominal aortic diameter (AAD). We conducted a meta-analysis of genome-wide association studies in 10 cohorts (n = 13 542) imputed to the 1000 Genome Project reference panel including 12 815 subjects in the discovery phase and 727 subjects [Partners Biobank cohort 1 (PBIO)] as replication. Maximum anterior-posterior diameter of the infrarenal aorta was used as AAD. We also included exome array data (n = 14 480) from seven epidemiologic studies. Single-variant and gene-based associations were done using SeqMeta package. A Mendelian randomization analysis was applied to investigate the causal effect of a number of clinical risk factors on AAD. In genome-wide association study (GWAS) on AAD, rs74448815 in the intronic region of LDLRAD4 reached genome-wide significance (beta = -0.02, SE = 0.004, P-value = 2.10 × 10-8). The association replicated in the PBIO1 cohort (P-value = 8.19 × 10-4). In exome-array single-variant analysis (P-value threshold = 9 × 10-7), the lowest P-value was found for rs239259 located in SLC22A20 (beta = 0.007, P-value = 1.2 × 10-5). In the gene-based analysis (P-value threshold = 1.85 × 10-6), PCSK5 showed an association with AAD (P-value = 8.03 × 10-7). Furthermore, in Mendelian randomization analyses, we found evidence for genetic association of pulse pressure (beta = -0.003, P-value = 0.02), triglycerides (beta = -0.16, P-value = 0.008) and height (beta = 0.03, P-value < 0.0001), known risk factors for AAA, consistent with a causal association with AAD. Our findings point to new biology as well as highlighting gene regions in mechanisms that have previously been implicated in the genetics of other vascular diseases.</description><subject>Association Studies</subject><subject>Exome - genetics</subject><subject>Genome-Wide Association Study</subject><subject>Humans</subject><subject>Mendelian Randomization Analysis</subject><subject>Polymorphism, Single Nucleotide - genetics</subject><subject>Triglycerides</subject><issn>0964-6906</issn><issn>1460-2083</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkU9PFTEUxRsjkSe4Yk-6x5E7r3-mjwWJIYomEDeynty2t4-SmZa0A_r8Gn5h5wkCrm5O7u-csziMHbTwoYWVOL4e18feowPVvmKLVmpolmDEa7aAlZaNXoHeZW9rvQFotRTdG7Yr1FJIY8yC_T6nRFN0HJPnbogpOhy4p4nKGBOmqfIcOFqft3LgmMuW9hHHLXPC15TySM2P6IljrdlFnGJOvE53PlJ9z-nn_OdYCm64xwn_Nl1S8jRETLzMcs7-9eza7LOdgEOld493j119_vT97Etz8e3869nHi8YJ006N9tbLYDohO2OU0wIs6k4sgwgAwSqrtLJgAYUB1EpKa7vOKW3IBAxLEnvs9CH39s6O5B2lqeDQ35Y4Ytn0GWP__yfF636d7_uVUsZImAOOHgJcybUWCk_eFvrtNv28Tf-4zUwfvqx7Yv-NIf4ASVWQ_Q</recordid><startdate>20221010</startdate><enddate>20221010</enddate><creator>Portilla-Fernandez, Eliana</creator><creator>Klarin, Derek</creator><creator>Hwang, Shih-Jen</creator><creator>Biggs, Mary L</creator><creator>Bis, Joshua C</creator><creator>Weiss, Stefan</creator><creator>Rospleszcz, Susanne</creator><creator>Natarajan, Pradeep</creator><creator>Hoffmann, Udo</creator><creator>Rogers, Ian S</creator><creator>Truong, Quynh A</creator><creator>Völker, Uwe</creator><creator>Dörr, Marcus</creator><creator>Bülow, Robin</creator><creator>Criqui, Michael H</creator><creator>Allison, Matthew</creator><creator>Ganesh, Santhi K</creator><creator>Yao, Jie</creator><creator>Waldenberger, Melanie</creator><creator>Bamberg, Fabian</creator><creator>Rice, Kenneth M</creator><creator>Essers, Jeroen</creator><creator>Kapteijn, Daniek M C</creator><creator>van der Laan, Sander W</creator><creator>de Knegt, Rob J</creator><creator>Ghanbari, Mohsen</creator><creator>Felix, Janine F</creator><creator>Ikram, M Arfan</creator><creator>Kavousi, Maryam</creator><creator>Uitterlinden, Andre G</creator><creator>Roks, Anton J M</creator><creator>Danser, A H Jan</creator><creator>Tsao, Philip S</creator><creator>Damrauer, Scott M</creator><creator>Guo, Xiuqing</creator><creator>Rotter, Jerome I</creator><creator>Psaty, Bruce M</creator><creator>Kathiresan, Sekar</creator><creator>Völzke, Henry</creator><creator>Peters, Annette</creator><creator>Johnson, Craig</creator><creator>Strauch, Konstantin</creator><creator>Meitinger, Thomas</creator><creator>O'Donnell, Christopher J</creator><creator>Dehghan, Abbas</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-4105-8586</orcidid><orcidid>https://orcid.org/0000-0001-6888-1404</orcidid><orcidid>https://orcid.org/0000-0002-4788-2341</orcidid><orcidid>https://orcid.org/0000-0002-3553-4315</orcidid></search><sort><creationdate>20221010</creationdate><title>Genetic and clinical determinants of abdominal aortic diameter: genome-wide association studies, exome array data and Mendelian randomization study</title><author>Portilla-Fernandez, Eliana ; Klarin, Derek ; Hwang, Shih-Jen ; Biggs, Mary L ; Bis, Joshua C ; Weiss, Stefan ; Rospleszcz, Susanne ; Natarajan, Pradeep ; Hoffmann, Udo ; Rogers, Ian S ; Truong, Quynh A ; Völker, Uwe ; Dörr, Marcus ; Bülow, Robin ; Criqui, Michael H ; Allison, Matthew ; Ganesh, Santhi K ; Yao, Jie ; Waldenberger, Melanie ; Bamberg, Fabian ; Rice, Kenneth M ; Essers, Jeroen ; Kapteijn, Daniek M C ; van der Laan, Sander W ; de Knegt, Rob J ; Ghanbari, Mohsen ; Felix, Janine F ; Ikram, M Arfan ; Kavousi, Maryam ; Uitterlinden, Andre G ; Roks, Anton J M ; Danser, A H Jan ; Tsao, Philip S ; Damrauer, Scott M ; Guo, Xiuqing ; Rotter, Jerome I ; Psaty, Bruce M ; Kathiresan, Sekar ; Völzke, Henry ; Peters, Annette ; Johnson, Craig ; Strauch, Konstantin ; Meitinger, Thomas ; O'Donnell, Christopher J ; Dehghan, Abbas</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c381t-6dbd4f87347885c630ba6732f3f00fb5b565b0b0a380a6544bb77c568e8faf2e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Association Studies</topic><topic>Exome - genetics</topic><topic>Genome-Wide Association Study</topic><topic>Humans</topic><topic>Mendelian Randomization Analysis</topic><topic>Polymorphism, Single Nucleotide - genetics</topic><topic>Triglycerides</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Portilla-Fernandez, Eliana</creatorcontrib><creatorcontrib>Klarin, Derek</creatorcontrib><creatorcontrib>Hwang, Shih-Jen</creatorcontrib><creatorcontrib>Biggs, Mary L</creatorcontrib><creatorcontrib>Bis, Joshua C</creatorcontrib><creatorcontrib>Weiss, Stefan</creatorcontrib><creatorcontrib>Rospleszcz, Susanne</creatorcontrib><creatorcontrib>Natarajan, Pradeep</creatorcontrib><creatorcontrib>Hoffmann, Udo</creatorcontrib><creatorcontrib>Rogers, Ian S</creatorcontrib><creatorcontrib>Truong, Quynh A</creatorcontrib><creatorcontrib>Völker, Uwe</creatorcontrib><creatorcontrib>Dörr, Marcus</creatorcontrib><creatorcontrib>Bülow, Robin</creatorcontrib><creatorcontrib>Criqui, Michael H</creatorcontrib><creatorcontrib>Allison, Matthew</creatorcontrib><creatorcontrib>Ganesh, Santhi K</creatorcontrib><creatorcontrib>Yao, Jie</creatorcontrib><creatorcontrib>Waldenberger, Melanie</creatorcontrib><creatorcontrib>Bamberg, Fabian</creatorcontrib><creatorcontrib>Rice, Kenneth M</creatorcontrib><creatorcontrib>Essers, Jeroen</creatorcontrib><creatorcontrib>Kapteijn, Daniek M C</creatorcontrib><creatorcontrib>van der Laan, Sander W</creatorcontrib><creatorcontrib>de Knegt, Rob J</creatorcontrib><creatorcontrib>Ghanbari, Mohsen</creatorcontrib><creatorcontrib>Felix, Janine F</creatorcontrib><creatorcontrib>Ikram, M Arfan</creatorcontrib><creatorcontrib>Kavousi, Maryam</creatorcontrib><creatorcontrib>Uitterlinden, Andre G</creatorcontrib><creatorcontrib>Roks, Anton J M</creatorcontrib><creatorcontrib>Danser, A H Jan</creatorcontrib><creatorcontrib>Tsao, Philip S</creatorcontrib><creatorcontrib>Damrauer, Scott M</creatorcontrib><creatorcontrib>Guo, Xiuqing</creatorcontrib><creatorcontrib>Rotter, Jerome I</creatorcontrib><creatorcontrib>Psaty, Bruce M</creatorcontrib><creatorcontrib>Kathiresan, Sekar</creatorcontrib><creatorcontrib>Völzke, Henry</creatorcontrib><creatorcontrib>Peters, Annette</creatorcontrib><creatorcontrib>Johnson, Craig</creatorcontrib><creatorcontrib>Strauch, Konstantin</creatorcontrib><creatorcontrib>Meitinger, Thomas</creatorcontrib><creatorcontrib>O'Donnell, Christopher J</creatorcontrib><creatorcontrib>Dehghan, Abbas</creatorcontrib><creatorcontrib>VA Million Veteran Program</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Human molecular genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Portilla-Fernandez, Eliana</au><au>Klarin, Derek</au><au>Hwang, Shih-Jen</au><au>Biggs, Mary L</au><au>Bis, Joshua C</au><au>Weiss, Stefan</au><au>Rospleszcz, Susanne</au><au>Natarajan, Pradeep</au><au>Hoffmann, Udo</au><au>Rogers, Ian S</au><au>Truong, Quynh A</au><au>Völker, Uwe</au><au>Dörr, Marcus</au><au>Bülow, Robin</au><au>Criqui, Michael H</au><au>Allison, Matthew</au><au>Ganesh, Santhi K</au><au>Yao, Jie</au><au>Waldenberger, Melanie</au><au>Bamberg, Fabian</au><au>Rice, Kenneth M</au><au>Essers, Jeroen</au><au>Kapteijn, Daniek M C</au><au>van der Laan, Sander W</au><au>de Knegt, Rob J</au><au>Ghanbari, Mohsen</au><au>Felix, Janine F</au><au>Ikram, M Arfan</au><au>Kavousi, Maryam</au><au>Uitterlinden, Andre G</au><au>Roks, Anton J M</au><au>Danser, A H Jan</au><au>Tsao, Philip S</au><au>Damrauer, Scott M</au><au>Guo, Xiuqing</au><au>Rotter, Jerome I</au><au>Psaty, Bruce M</au><au>Kathiresan, Sekar</au><au>Völzke, Henry</au><au>Peters, Annette</au><au>Johnson, Craig</au><au>Strauch, Konstantin</au><au>Meitinger, Thomas</au><au>O'Donnell, Christopher J</au><au>Dehghan, Abbas</au><aucorp>VA Million Veteran Program</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic and clinical determinants of abdominal aortic diameter: genome-wide association studies, exome array data and Mendelian randomization study</atitle><jtitle>Human molecular genetics</jtitle><addtitle>Hum Mol Genet</addtitle><date>2022-10-10</date><risdate>2022</risdate><volume>31</volume><issue>20</issue><spage>3566</spage><epage>3579</epage><pages>3566-3579</pages><issn>0964-6906</issn><eissn>1460-2083</eissn><abstract>Progressive dilation of the infrarenal aortic diameter is a consequence of the ageing process and is considered the main determinant of abdominal aortic aneurysm (AAA). We aimed to investigate the genetic and clinical determinants of abdominal aortic diameter (AAD). We conducted a meta-analysis of genome-wide association studies in 10 cohorts (n = 13 542) imputed to the 1000 Genome Project reference panel including 12 815 subjects in the discovery phase and 727 subjects [Partners Biobank cohort 1 (PBIO)] as replication. Maximum anterior-posterior diameter of the infrarenal aorta was used as AAD. We also included exome array data (n = 14 480) from seven epidemiologic studies. Single-variant and gene-based associations were done using SeqMeta package. A Mendelian randomization analysis was applied to investigate the causal effect of a number of clinical risk factors on AAD. In genome-wide association study (GWAS) on AAD, rs74448815 in the intronic region of LDLRAD4 reached genome-wide significance (beta = -0.02, SE = 0.004, P-value = 2.10 × 10-8). The association replicated in the PBIO1 cohort (P-value = 8.19 × 10-4). In exome-array single-variant analysis (P-value threshold = 9 × 10-7), the lowest P-value was found for rs239259 located in SLC22A20 (beta = 0.007, P-value = 1.2 × 10-5). In the gene-based analysis (P-value threshold = 1.85 × 10-6), PCSK5 showed an association with AAD (P-value = 8.03 × 10-7). Furthermore, in Mendelian randomization analyses, we found evidence for genetic association of pulse pressure (beta = -0.003, P-value = 0.02), triglycerides (beta = -0.16, P-value = 0.008) and height (beta = 0.03, P-value < 0.0001), known risk factors for AAA, consistent with a causal association with AAD. Our findings point to new biology as well as highlighting gene regions in mechanisms that have previously been implicated in the genetics of other vascular diseases.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>35234888</pmid><doi>10.1093/hmg/ddac051</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0003-4105-8586</orcidid><orcidid>https://orcid.org/0000-0001-6888-1404</orcidid><orcidid>https://orcid.org/0000-0002-4788-2341</orcidid><orcidid>https://orcid.org/0000-0002-3553-4315</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0964-6906 |
ispartof | Human molecular genetics, 2022-10, Vol.31 (20), p.3566-3579 |
issn | 0964-6906 1460-2083 |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_9558840 |
source | Oxford University Press Journals All Titles (1996-Current); MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
subjects | Association Studies Exome - genetics Genome-Wide Association Study Humans Mendelian Randomization Analysis Polymorphism, Single Nucleotide - genetics Triglycerides |
title | Genetic and clinical determinants of abdominal aortic diameter: genome-wide association studies, exome array data and Mendelian randomization study |
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