Whole exome sequencing of known eye genes reveals genetic causes for high myopia
High myopia (refractive error ≤ -6 diopters (D)) is a heterogeneous condition, and without clear accompanying features it can be difficult to pinpoint a genetic cause. This observational study aimed to evaluate the utility of whole exome sequencing (WES) using an eye disorder gene panel in European...
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Veröffentlicht in: | Human molecular genetics 2022-09, Vol.31 (19), p.3290-3298 |
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creator | Haarman, Annechien E G Thiadens, Alberta A H J van Tienhoven, Marianne Loudon, Sjoukje E de Klein, J E M M Annelies Brosens, Erwin Polling, Jan Roelof van der Schoot, Vyne Bouman, Arjan Kievit, Anneke J A Hoefsloot, Lies H Klaver, Caroline C W Verhoeven, Virginie J M |
description | High myopia (refractive error ≤ -6 diopters (D)) is a heterogeneous condition, and without clear accompanying features it can be difficult to pinpoint a genetic cause. This observational study aimed to evaluate the utility of whole exome sequencing (WES) using an eye disorder gene panel in European patients with high myopia. Patients with high myopia were recruited by ophthalmologists and clinical geneticists. Clinical features were categorized into isolated high myopia, high myopia with other ocular involvement or with systemic involvement. WES was performed and an eye disorder gene panel of ~ 500 genes was evaluated. 113 patients with high myopia (mean (SD) refractive error - 11.8D (5.2) were included. Of these, 53% were children younger than 12 years of age (53%), 13.3% were 12-18 years, and 34% were adults (aged over 18 years). 23 out of 113 patients (20%) received a genetic diagnosis of which 11 patients displayed additional ocular or systemic involvement. Pathogenic variants were identified in retinal dystrophy genes (e.g.GUCY2D, CACNA1F), connective tissue disease genes (e.g. COL18A1, COL2A1), non-syndromic high myopia genes (ARR3), ocular development genes (e.g. PAX6) and other genes (ASPH, CNNM4). In 20% of our high myopic study population WES using an eye gene panel enabled us to diagnose the genetic cause for this disorder. Eye genes known to cause retinal dystrophy, developmental or syndromic disorders can cause high myopia without apparent clinical features of other pathology. |
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This observational study aimed to evaluate the utility of whole exome sequencing (WES) using an eye disorder gene panel in European patients with high myopia. Patients with high myopia were recruited by ophthalmologists and clinical geneticists. Clinical features were categorized into isolated high myopia, high myopia with other ocular involvement or with systemic involvement. WES was performed and an eye disorder gene panel of ~ 500 genes was evaluated. 113 patients with high myopia (mean (SD) refractive error - 11.8D (5.2) were included. Of these, 53% were children younger than 12 years of age (53%), 13.3% were 12-18 years, and 34% were adults (aged over 18 years). 23 out of 113 patients (20%) received a genetic diagnosis of which 11 patients displayed additional ocular or systemic involvement. Pathogenic variants were identified in retinal dystrophy genes (e.g.GUCY2D, CACNA1F), connective tissue disease genes (e.g. COL18A1, COL2A1), non-syndromic high myopia genes (ARR3), ocular development genes (e.g. PAX6) and other genes (ASPH, CNNM4). In 20% of our high myopic study population WES using an eye gene panel enabled us to diagnose the genetic cause for this disorder. Eye genes known to cause retinal dystrophy, developmental or syndromic disorders can cause high myopia without apparent clinical features of other pathology.</description><identifier>ISSN: 0964-6906</identifier><identifier>EISSN: 1460-2083</identifier><identifier>DOI: 10.1093/hmg/ddac113</identifier><identifier>PMID: 35567543</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Original</subject><ispartof>Human molecular genetics, 2022-09, Vol.31 (19), p.3290-3298</ispartof><rights>The Author(s) 2022. Published by Oxford University Press. All rights reserved. Forpermissions, please e-mail: journals.permissions@oup.com.</rights><rights>The Author(s) 2022. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com 2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c447t-cb730f46d8a9d97ea3e69354fd2b4e48f0654c5603ebd69c39ebd130cdae3b053</citedby><cites>FETCH-LOGICAL-c447t-cb730f46d8a9d97ea3e69354fd2b4e48f0654c5603ebd69c39ebd130cdae3b053</cites><orcidid>0000-0001-7359-7862</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35567543$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Haarman, Annechien E G</creatorcontrib><creatorcontrib>Thiadens, Alberta A H J</creatorcontrib><creatorcontrib>van Tienhoven, Marianne</creatorcontrib><creatorcontrib>Loudon, Sjoukje E</creatorcontrib><creatorcontrib>de Klein, J E M M Annelies</creatorcontrib><creatorcontrib>Brosens, Erwin</creatorcontrib><creatorcontrib>Polling, Jan Roelof</creatorcontrib><creatorcontrib>van der Schoot, Vyne</creatorcontrib><creatorcontrib>Bouman, Arjan</creatorcontrib><creatorcontrib>Kievit, Anneke J A</creatorcontrib><creatorcontrib>Hoefsloot, Lies H</creatorcontrib><creatorcontrib>Klaver, Caroline C W</creatorcontrib><creatorcontrib>Verhoeven, Virginie J M</creatorcontrib><title>Whole exome sequencing of known eye genes reveals genetic causes for high myopia</title><title>Human molecular genetics</title><addtitle>Hum Mol Genet</addtitle><description>High myopia (refractive error ≤ -6 diopters (D)) is a heterogeneous condition, and without clear accompanying features it can be difficult to pinpoint a genetic cause. This observational study aimed to evaluate the utility of whole exome sequencing (WES) using an eye disorder gene panel in European patients with high myopia. Patients with high myopia were recruited by ophthalmologists and clinical geneticists. Clinical features were categorized into isolated high myopia, high myopia with other ocular involvement or with systemic involvement. WES was performed and an eye disorder gene panel of ~ 500 genes was evaluated. 113 patients with high myopia (mean (SD) refractive error - 11.8D (5.2) were included. Of these, 53% were children younger than 12 years of age (53%), 13.3% were 12-18 years, and 34% were adults (aged over 18 years). 23 out of 113 patients (20%) received a genetic diagnosis of which 11 patients displayed additional ocular or systemic involvement. Pathogenic variants were identified in retinal dystrophy genes (e.g.GUCY2D, CACNA1F), connective tissue disease genes (e.g. COL18A1, COL2A1), non-syndromic high myopia genes (ARR3), ocular development genes (e.g. PAX6) and other genes (ASPH, CNNM4). In 20% of our high myopic study population WES using an eye gene panel enabled us to diagnose the genetic cause for this disorder. Eye genes known to cause retinal dystrophy, developmental or syndromic disorders can cause high myopia without apparent clinical features of other pathology.</description><subject>Original</subject><issn>0964-6906</issn><issn>1460-2083</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNpVkctLAzEQxoMotlZP3iVHQdYmm2y2uQhSfEFBD4rHkM3OPnR3U5Nutf-9qa1FT8PM_Pjm8SF0SsklJZKNq7Yc57k2lLI9NKRckCgmE7aPhkQKHglJxAAdef9GCBWcpYdowJJEpAlnQ_T0WtkGMHzZFrCHjx46U3cltgV-7-xnh2EFuIQOPHawBN34n2xRG2x070O5sA5XdVnhdmXntT5GB0Wg4GQbR-jl9uZ5eh_NHu8eptezyHCeLiKTpYwUXOQTLXOZgmYgJEt4kccZBz4piEi4SQRhkOVCGiZDpIyYXAPLSMJG6GqjO--zFnID3cLpRs1d3Wq3UlbX6n-nqytV2qWSSbw-PwicbwWcDWf7hWprb6BpdAe29yoWgqeSxoQE9GKDGme9d1DsxlCi1h6o4IHaehDos7-b7djfp7Nvas6Fnw</recordid><startdate>20220929</startdate><enddate>20220929</enddate><creator>Haarman, Annechien E G</creator><creator>Thiadens, Alberta A H J</creator><creator>van Tienhoven, Marianne</creator><creator>Loudon, Sjoukje E</creator><creator>de Klein, J E M M Annelies</creator><creator>Brosens, Erwin</creator><creator>Polling, Jan Roelof</creator><creator>van der Schoot, Vyne</creator><creator>Bouman, Arjan</creator><creator>Kievit, Anneke J A</creator><creator>Hoefsloot, Lies H</creator><creator>Klaver, Caroline C W</creator><creator>Verhoeven, Virginie J M</creator><general>Oxford University Press</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-7359-7862</orcidid></search><sort><creationdate>20220929</creationdate><title>Whole exome sequencing of known eye genes reveals genetic causes for high myopia</title><author>Haarman, Annechien E G ; Thiadens, Alberta A H J ; van Tienhoven, Marianne ; Loudon, Sjoukje E ; de Klein, J E M M Annelies ; Brosens, Erwin ; Polling, Jan Roelof ; van der Schoot, Vyne ; Bouman, Arjan ; Kievit, Anneke J A ; Hoefsloot, Lies H ; Klaver, Caroline C W ; Verhoeven, Virginie J M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c447t-cb730f46d8a9d97ea3e69354fd2b4e48f0654c5603ebd69c39ebd130cdae3b053</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Original</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Haarman, Annechien E G</creatorcontrib><creatorcontrib>Thiadens, Alberta A H J</creatorcontrib><creatorcontrib>van Tienhoven, Marianne</creatorcontrib><creatorcontrib>Loudon, Sjoukje E</creatorcontrib><creatorcontrib>de Klein, J E M M Annelies</creatorcontrib><creatorcontrib>Brosens, Erwin</creatorcontrib><creatorcontrib>Polling, Jan Roelof</creatorcontrib><creatorcontrib>van der Schoot, Vyne</creatorcontrib><creatorcontrib>Bouman, Arjan</creatorcontrib><creatorcontrib>Kievit, Anneke J A</creatorcontrib><creatorcontrib>Hoefsloot, Lies H</creatorcontrib><creatorcontrib>Klaver, Caroline C W</creatorcontrib><creatorcontrib>Verhoeven, Virginie J M</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Human molecular genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Haarman, Annechien E G</au><au>Thiadens, Alberta A H J</au><au>van Tienhoven, Marianne</au><au>Loudon, Sjoukje E</au><au>de Klein, J E M M Annelies</au><au>Brosens, Erwin</au><au>Polling, Jan Roelof</au><au>van der Schoot, Vyne</au><au>Bouman, Arjan</au><au>Kievit, Anneke J A</au><au>Hoefsloot, Lies H</au><au>Klaver, Caroline C W</au><au>Verhoeven, Virginie J M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Whole exome sequencing of known eye genes reveals genetic causes for high myopia</atitle><jtitle>Human molecular genetics</jtitle><addtitle>Hum Mol Genet</addtitle><date>2022-09-29</date><risdate>2022</risdate><volume>31</volume><issue>19</issue><spage>3290</spage><epage>3298</epage><pages>3290-3298</pages><issn>0964-6906</issn><eissn>1460-2083</eissn><abstract>High myopia (refractive error ≤ -6 diopters (D)) is a heterogeneous condition, and without clear accompanying features it can be difficult to pinpoint a genetic cause. This observational study aimed to evaluate the utility of whole exome sequencing (WES) using an eye disorder gene panel in European patients with high myopia. Patients with high myopia were recruited by ophthalmologists and clinical geneticists. Clinical features were categorized into isolated high myopia, high myopia with other ocular involvement or with systemic involvement. WES was performed and an eye disorder gene panel of ~ 500 genes was evaluated. 113 patients with high myopia (mean (SD) refractive error - 11.8D (5.2) were included. Of these, 53% were children younger than 12 years of age (53%), 13.3% were 12-18 years, and 34% were adults (aged over 18 years). 23 out of 113 patients (20%) received a genetic diagnosis of which 11 patients displayed additional ocular or systemic involvement. Pathogenic variants were identified in retinal dystrophy genes (e.g.GUCY2D, CACNA1F), connective tissue disease genes (e.g. COL18A1, COL2A1), non-syndromic high myopia genes (ARR3), ocular development genes (e.g. PAX6) and other genes (ASPH, CNNM4). In 20% of our high myopic study population WES using an eye gene panel enabled us to diagnose the genetic cause for this disorder. Eye genes known to cause retinal dystrophy, developmental or syndromic disorders can cause high myopia without apparent clinical features of other pathology.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>35567543</pmid><doi>10.1093/hmg/ddac113</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0001-7359-7862</orcidid><oa>free_for_read</oa></addata></record> |
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title | Whole exome sequencing of known eye genes reveals genetic causes for high myopia |
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