The use of readily available laboratory tests for the identification of the emerging yeast Candida auris in Mexico
Identification of the emerging multidrug-resistant yeast Candida auris is challenging. Here, we describe the role of the Mexico national reference laboratory Instituto de Diagnóstico y Referencia Epidemiológicos Dr. Manuel Martínez Báez (InDRE) and the Mexican national laboratory network in the iden...
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| Veröffentlicht in: | Archives of microbiology 2022-09, Vol.204 (9), p.592-592, Article 592 |
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| creator | González-Durán, Elizabeth Contreras-Pérez, Cudberto U. Caceres, Diego H. Ríos-Rosas, Claudia Piñón-Ortega, Javier de J. Téllez-Saucedo, Ma. Dolores Marín-Suro, Edgar S. Wong-Arámbula, Claudia E. Moreno-Escobar, E. Alejandra Ramírez-González, José Ernesto Ramírez-Barrios, J. Gabriela Montes-Colima, Norma A. Lockhart, Shawn R. Martínez-Montiel, Nancy Martínez-Contreras, Rebeca D. García-Ruíz, Pablo Salazar-Sánchez, Ma. Isabel Hernández-Rivas, Lucia López-Martínez, Irma |
| description | Identification of the emerging multidrug-resistant yeast
Candida auris
is challenging. Here, we describe the role of the Mexico national reference laboratory Instituto de Diagnóstico y Referencia Epidemiológicos Dr. Manuel Martínez Báez (InDRE) and the Mexican national laboratory network in the identification of
C. auris
. Reference identification of six suspected isolates was done based on phenotypic and molecular laboratory methods, including growth in special media, evaluation of isolate micromorphology, and species-specific PCR and pan-fungal PCR and sequencing. The four
C. auris
isolates identified were able to grow on modified Sabouraud agar with 10% NaCl incubated at 42 °C. With one exception, isolates of
C. auris
were spherical to ovoid yeast-like cells and blastoconidia, with no hyphae or pseudohyphae on cornmeal agar.
C. auris
isolates were resistant to fluconazole. Species-specific and pan-fungal PCR confirmed isolates as
C. auris
. Sequence analysis revealed the presence of two different
C. auris
clades in Mexico, clade I (South Asia) and clade IV (South America). |
| doi_str_mv | 10.1007/s00203-022-03159-3 |
| format | Article |
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Candida auris
is challenging. Here, we describe the role of the Mexico national reference laboratory Instituto de Diagnóstico y Referencia Epidemiológicos Dr. Manuel Martínez Báez (InDRE) and the Mexican national laboratory network in the identification of
C. auris
. Reference identification of six suspected isolates was done based on phenotypic and molecular laboratory methods, including growth in special media, evaluation of isolate micromorphology, and species-specific PCR and pan-fungal PCR and sequencing. The four
C. auris
isolates identified were able to grow on modified Sabouraud agar with 10% NaCl incubated at 42 °C. With one exception, isolates of
C. auris
were spherical to ovoid yeast-like cells and blastoconidia, with no hyphae or pseudohyphae on cornmeal agar.
C. auris
isolates were resistant to fluconazole. Species-specific and pan-fungal PCR confirmed isolates as
C. auris
. Sequence analysis revealed the presence of two different
C. auris
clades in Mexico, clade I (South Asia) and clade IV (South America).</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-022-03159-3</identifier><identifier>PMID: 36053373</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Biochemistry ; Biomedical and Life Sciences ; Biotechnology ; Candida auris ; Cell Biology ; Ecology ; Fluconazole ; Fungal infections ; Fungi ; Hyphae ; Laboratories ; Laboratory methods ; Laboratory tests ; Life Sciences ; Microbial Ecology ; Microbiology ; Multidrug resistance ; Original Paper ; Pseudohyphae ; Sequence analysis ; Sodium chloride ; Yeast ; Yeasts</subject><ispartof>Archives of microbiology, 2022-09, Vol.204 (9), p.592-592, Article 592</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2022. Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2022, Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c451t-77e9767e9f832ddfa116b83cfbb67070fd052012aef13d064f2d69cab8da6b83</citedby><cites>FETCH-LOGICAL-c451t-77e9767e9f832ddfa116b83cfbb67070fd052012aef13d064f2d69cab8da6b83</cites><orcidid>0000-0001-8749-9809</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00203-022-03159-3$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00203-022-03159-3$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>González-Durán, Elizabeth</creatorcontrib><creatorcontrib>Contreras-Pérez, Cudberto U.</creatorcontrib><creatorcontrib>Caceres, Diego H.</creatorcontrib><creatorcontrib>Ríos-Rosas, Claudia</creatorcontrib><creatorcontrib>Piñón-Ortega, Javier de J.</creatorcontrib><creatorcontrib>Téllez-Saucedo, Ma. Dolores</creatorcontrib><creatorcontrib>Marín-Suro, Edgar S.</creatorcontrib><creatorcontrib>Wong-Arámbula, Claudia E.</creatorcontrib><creatorcontrib>Moreno-Escobar, E. Alejandra</creatorcontrib><creatorcontrib>Ramírez-González, José Ernesto</creatorcontrib><creatorcontrib>Ramírez-Barrios, J. Gabriela</creatorcontrib><creatorcontrib>Montes-Colima, Norma A.</creatorcontrib><creatorcontrib>Lockhart, Shawn R.</creatorcontrib><creatorcontrib>Martínez-Montiel, Nancy</creatorcontrib><creatorcontrib>Martínez-Contreras, Rebeca D.</creatorcontrib><creatorcontrib>García-Ruíz, Pablo</creatorcontrib><creatorcontrib>Salazar-Sánchez, Ma. Isabel</creatorcontrib><creatorcontrib>Hernández-Rivas, Lucia</creatorcontrib><creatorcontrib>López-Martínez, Irma</creatorcontrib><title>The use of readily available laboratory tests for the identification of the emerging yeast Candida auris in Mexico</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><description>Identification of the emerging multidrug-resistant yeast
Candida auris
is challenging. Here, we describe the role of the Mexico national reference laboratory Instituto de Diagnóstico y Referencia Epidemiológicos Dr. Manuel Martínez Báez (InDRE) and the Mexican national laboratory network in the identification of
C. auris
. Reference identification of six suspected isolates was done based on phenotypic and molecular laboratory methods, including growth in special media, evaluation of isolate micromorphology, and species-specific PCR and pan-fungal PCR and sequencing. The four
C. auris
isolates identified were able to grow on modified Sabouraud agar with 10% NaCl incubated at 42 °C. With one exception, isolates of
C. auris
were spherical to ovoid yeast-like cells and blastoconidia, with no hyphae or pseudohyphae on cornmeal agar.
C. auris
isolates were resistant to fluconazole. Species-specific and pan-fungal PCR confirmed isolates as
C. auris
. Sequence analysis revealed the presence of two different
C. auris
clades in Mexico, clade I (South Asia) and clade IV (South America).</description><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Candida auris</subject><subject>Cell Biology</subject><subject>Ecology</subject><subject>Fluconazole</subject><subject>Fungal infections</subject><subject>Fungi</subject><subject>Hyphae</subject><subject>Laboratories</subject><subject>Laboratory methods</subject><subject>Laboratory tests</subject><subject>Life Sciences</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Multidrug resistance</subject><subject>Original Paper</subject><subject>Pseudohyphae</subject><subject>Sequence analysis</subject><subject>Sodium chloride</subject><subject>Yeast</subject><subject>Yeasts</subject><issn>0302-8933</issn><issn>1432-072X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp9kU9v1DAQxS1ERZfCF-BkiQuXwNiTxMkFCa34J7XqZQ-9WZPY3rrK2sVOKvbb43QrEBy4jGX7957m6TH2RsB7AaA-ZAAJWIGUFaBo-gqfsY2osVyVvHnONoAgq65HPGcvc74DELLruhfsHFtoEBVuWNrdWr5ky6PjyZLx05HTA_mJhsnyMmOiOaYjn22eM3cx8bkovLFh9s6PNPsYVvH6ag827X3Y86OlPPMtBeMNcVqSz9wHfmV_-jG-YmeOpmxfP50XbPfl8277rbq8_vp9--myGutGzJVStldtGa5DaYwjIdqhw9ENQ6tAgTPQyJKIrBNooK2dNG0_0tAZWsEL9vFke78MB2vGsnCiSd8nf6B01JG8_vsn-Fu9jw-6r7FDJYvBuyeDFH8sJb4--DzaaaJg45K1VNCrWsheFPTtP-hdXFIo6R6p0lJTr4byRI0p5pys-72MAL02qk-N6tKofmxUYxHhSZQLHPY2_bH-j-oX_zukJw</recordid><startdate>20220901</startdate><enddate>20220901</enddate><creator>González-Durán, Elizabeth</creator><creator>Contreras-Pérez, Cudberto U.</creator><creator>Caceres, Diego H.</creator><creator>Ríos-Rosas, Claudia</creator><creator>Piñón-Ortega, Javier de J.</creator><creator>Téllez-Saucedo, Ma. 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Isabel</creator><creator>Hernández-Rivas, Lucia</creator><creator>López-Martínez, Irma</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-8749-9809</orcidid></search><sort><creationdate>20220901</creationdate><title>The use of readily available laboratory tests for the identification of the emerging yeast Candida auris in Mexico</title><author>González-Durán, Elizabeth ; Contreras-Pérez, Cudberto U. ; Caceres, Diego H. ; Ríos-Rosas, Claudia ; Piñón-Ortega, Javier de J. ; Téllez-Saucedo, Ma. Dolores ; Marín-Suro, Edgar S. ; Wong-Arámbula, Claudia E. ; Moreno-Escobar, E. Alejandra ; Ramírez-González, José Ernesto ; Ramírez-Barrios, J. Gabriela ; Montes-Colima, Norma A. ; Lockhart, Shawn R. ; Martínez-Montiel, Nancy ; Martínez-Contreras, Rebeca D. ; García-Ruíz, Pablo ; Salazar-Sánchez, Ma. 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Dolores</au><au>Marín-Suro, Edgar S.</au><au>Wong-Arámbula, Claudia E.</au><au>Moreno-Escobar, E. Alejandra</au><au>Ramírez-González, José Ernesto</au><au>Ramírez-Barrios, J. Gabriela</au><au>Montes-Colima, Norma A.</au><au>Lockhart, Shawn R.</au><au>Martínez-Montiel, Nancy</au><au>Martínez-Contreras, Rebeca D.</au><au>García-Ruíz, Pablo</au><au>Salazar-Sánchez, Ma. Isabel</au><au>Hernández-Rivas, Lucia</au><au>López-Martínez, Irma</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The use of readily available laboratory tests for the identification of the emerging yeast Candida auris in Mexico</atitle><jtitle>Archives of microbiology</jtitle><stitle>Arch Microbiol</stitle><date>2022-09-01</date><risdate>2022</risdate><volume>204</volume><issue>9</issue><spage>592</spage><epage>592</epage><pages>592-592</pages><artnum>592</artnum><issn>0302-8933</issn><eissn>1432-072X</eissn><abstract>Identification of the emerging multidrug-resistant yeast
Candida auris
is challenging. Here, we describe the role of the Mexico national reference laboratory Instituto de Diagnóstico y Referencia Epidemiológicos Dr. Manuel Martínez Báez (InDRE) and the Mexican national laboratory network in the identification of
C. auris
. Reference identification of six suspected isolates was done based on phenotypic and molecular laboratory methods, including growth in special media, evaluation of isolate micromorphology, and species-specific PCR and pan-fungal PCR and sequencing. The four
C. auris
isolates identified were able to grow on modified Sabouraud agar with 10% NaCl incubated at 42 °C. With one exception, isolates of
C. auris
were spherical to ovoid yeast-like cells and blastoconidia, with no hyphae or pseudohyphae on cornmeal agar.
C. auris
isolates were resistant to fluconazole. Species-specific and pan-fungal PCR confirmed isolates as
C. auris
. Sequence analysis revealed the presence of two different
C. auris
clades in Mexico, clade I (South Asia) and clade IV (South America).</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>36053373</pmid><doi>10.1007/s00203-022-03159-3</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0001-8749-9809</orcidid><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0302-8933 |
| ispartof | Archives of microbiology, 2022-09, Vol.204 (9), p.592-592, Article 592 |
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| language | eng |
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| source | SpringerLink Journals |
| subjects | Biochemistry Biomedical and Life Sciences Biotechnology Candida auris Cell Biology Ecology Fluconazole Fungal infections Fungi Hyphae Laboratories Laboratory methods Laboratory tests Life Sciences Microbial Ecology Microbiology Multidrug resistance Original Paper Pseudohyphae Sequence analysis Sodium chloride Yeast Yeasts |
| title | The use of readily available laboratory tests for the identification of the emerging yeast Candida auris in Mexico |
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