Interplay of LncRNAs NEAT1 and TUG1 in Incidence of Cytokine Storm in Appraisal of COVID-19 Infection

Background: In 2019, the coronavirus pandemic emerged, resulting in the highest mortality and morbidity rate globally. It has a prevailing transmission rate and continues to be a global burden. There is a paucity of data regarding the role of long non-coding RNAs (lncRNAs) in COVID-19. Therefore, th...

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Veröffentlicht in:International journal of biological sciences 2022-01, Vol.18 (13), p.4901-4913
Hauptverfasser: Tayel, Safaa I., El-Masry, Eman A., Abdelaal, Gehan A., Shehab-Eldeen, Somaia, Essa, Abdallah, Muharram, Nashwa M.
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container_end_page 4913
container_issue 13
container_start_page 4901
container_title International journal of biological sciences
container_volume 18
creator Tayel, Safaa I.
El-Masry, Eman A.
Abdelaal, Gehan A.
Shehab-Eldeen, Somaia
Essa, Abdallah
Muharram, Nashwa M.
description Background: In 2019, the coronavirus pandemic emerged, resulting in the highest mortality and morbidity rate globally. It has a prevailing transmission rate and continues to be a global burden. There is a paucity of data regarding the role of long non-coding RNAs (lncRNAs) in COVID-19. Therefore, the current study aimed to investigate lncRNAs, particularly NEAT1 and TUG1, and their association with IL-6, CCL2, and TNF-α in COVID-19 patients with moderate and severe disease. Methods: The study was conducted on 80 COVID-19 patients (35 with severe and 45 with moderate infection) and 40 control subjects. Complete blood count (CBC), D-dimer assay, serum ferritin, and CRP were assayed. qRT-PCR was used to measure RNAs and lncRNAs. Results: NEAT1 and TUG1 expression levels were higher in COVID-19 patients compared with controls (P< 0.001). Furthermore, CCL2, IL-6, and TNF-α expressions were higher in COVID-19 patients compared to controls (P< 0.001). CCL2 and IL-6 expression levels were significantly higher in patients with severe compared to those with moderate COVID-19 infection (P< 0.001). IL-6 had the highest accuracy in distinguishing COVID-19 patients (AUC=1, P< 0.001 at a cutoff of 0.359), followed by TUG1 (AUC=0.999, P< 0.001 at a cutoff of 2.28). NEAT1 and TUG1 had significant correlations with the measured cytokines, and based on the multivariate regression analysis, NEAT1 is the independent predictor for survival in COVID-19 patients (P=0.02). Conclusion: In COVID-19 patients, significant overexpression of NEAT1 and TUG1 was observed, consistent with cytokine storm. TUG1 could be an efficient diagnostic biomarker, whereas NEAT1 was an independent predictor for overall survival.
doi_str_mv 10.7150/ijbs.72318
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It has a prevailing transmission rate and continues to be a global burden. There is a paucity of data regarding the role of long non-coding RNAs (lncRNAs) in COVID-19. Therefore, the current study aimed to investigate lncRNAs, particularly NEAT1 and TUG1, and their association with IL-6, CCL2, and TNF-α in COVID-19 patients with moderate and severe disease. Methods: The study was conducted on 80 COVID-19 patients (35 with severe and 45 with moderate infection) and 40 control subjects. Complete blood count (CBC), D-dimer assay, serum ferritin, and CRP were assayed. qRT-PCR was used to measure RNAs and lncRNAs. Results: NEAT1 and TUG1 expression levels were higher in COVID-19 patients compared with controls (P&lt; 0.001). Furthermore, CCL2, IL-6, and TNF-α expressions were higher in COVID-19 patients compared to controls (P&lt; 0.001). CCL2 and IL-6 expression levels were significantly higher in patients with severe compared to those with moderate COVID-19 infection (P&lt; 0.001). IL-6 had the highest accuracy in distinguishing COVID-19 patients (AUC=1, P&lt; 0.001 at a cutoff of 0.359), followed by TUG1 (AUC=0.999, P&lt; 0.001 at a cutoff of 2.28). NEAT1 and TUG1 had significant correlations with the measured cytokines, and based on the multivariate regression analysis, NEAT1 is the independent predictor for survival in COVID-19 patients (P=0.02). Conclusion: In COVID-19 patients, significant overexpression of NEAT1 and TUG1 was observed, consistent with cytokine storm. TUG1 could be an efficient diagnostic biomarker, whereas NEAT1 was an independent predictor for overall survival.</description><identifier>ISSN: 1449-2288</identifier><identifier>EISSN: 1449-2288</identifier><identifier>DOI: 10.7150/ijbs.72318</identifier><identifier>PMID: 35982898</identifier><language>eng</language><publisher>Sydney: Ivyspring International Publisher Pty Ltd</publisher><subject>Bacterial infections ; Biomarkers ; Cancer ; Chemokines ; Coronaviruses ; COVID-19 ; Cytokine storm ; Cytokines ; Disease transmission ; Dyspnea ; Ferritin ; Hypoxia ; Infections ; Inflammation ; Interleukin 6 ; Lymphocytes ; Medical prognosis ; Monocyte chemoattractant protein 1 ; Morbidity ; Non-coding RNA ; Oxygen saturation ; Pandemics ; Pneumonia ; Regression analysis ; Research Paper ; Sepsis ; Severe acute respiratory syndrome coronavirus 2 ; Survival ; Tumor necrosis factor-TNF ; Tumor necrosis factor-α ; Viral diseases ; Viral infections</subject><ispartof>International journal of biological sciences, 2022-01, Vol.18 (13), p.4901-4913</ispartof><rights>2022. 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Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>The author(s) 2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c313t-39c461499c530d51fa5bd9e16d3ae2204deeea008d788942bb7204e62032bea53</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9379411/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9379411/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids></links><search><creatorcontrib>Tayel, Safaa I.</creatorcontrib><creatorcontrib>El-Masry, Eman A.</creatorcontrib><creatorcontrib>Abdelaal, Gehan A.</creatorcontrib><creatorcontrib>Shehab-Eldeen, Somaia</creatorcontrib><creatorcontrib>Essa, Abdallah</creatorcontrib><creatorcontrib>Muharram, Nashwa M.</creatorcontrib><title>Interplay of LncRNAs NEAT1 and TUG1 in Incidence of Cytokine Storm in Appraisal of COVID-19 Infection</title><title>International journal of biological sciences</title><description>Background: In 2019, the coronavirus pandemic emerged, resulting in the highest mortality and morbidity rate globally. It has a prevailing transmission rate and continues to be a global burden. There is a paucity of data regarding the role of long non-coding RNAs (lncRNAs) in COVID-19. Therefore, the current study aimed to investigate lncRNAs, particularly NEAT1 and TUG1, and their association with IL-6, CCL2, and TNF-α in COVID-19 patients with moderate and severe disease. Methods: The study was conducted on 80 COVID-19 patients (35 with severe and 45 with moderate infection) and 40 control subjects. Complete blood count (CBC), D-dimer assay, serum ferritin, and CRP were assayed. qRT-PCR was used to measure RNAs and lncRNAs. Results: NEAT1 and TUG1 expression levels were higher in COVID-19 patients compared with controls (P&lt; 0.001). Furthermore, CCL2, IL-6, and TNF-α expressions were higher in COVID-19 patients compared to controls (P&lt; 0.001). CCL2 and IL-6 expression levels were significantly higher in patients with severe compared to those with moderate COVID-19 infection (P&lt; 0.001). IL-6 had the highest accuracy in distinguishing COVID-19 patients (AUC=1, P&lt; 0.001 at a cutoff of 0.359), followed by TUG1 (AUC=0.999, P&lt; 0.001 at a cutoff of 2.28). NEAT1 and TUG1 had significant correlations with the measured cytokines, and based on the multivariate regression analysis, NEAT1 is the independent predictor for survival in COVID-19 patients (P=0.02). Conclusion: In COVID-19 patients, significant overexpression of NEAT1 and TUG1 was observed, consistent with cytokine storm. 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It has a prevailing transmission rate and continues to be a global burden. There is a paucity of data regarding the role of long non-coding RNAs (lncRNAs) in COVID-19. Therefore, the current study aimed to investigate lncRNAs, particularly NEAT1 and TUG1, and their association with IL-6, CCL2, and TNF-α in COVID-19 patients with moderate and severe disease. Methods: The study was conducted on 80 COVID-19 patients (35 with severe and 45 with moderate infection) and 40 control subjects. Complete blood count (CBC), D-dimer assay, serum ferritin, and CRP were assayed. qRT-PCR was used to measure RNAs and lncRNAs. Results: NEAT1 and TUG1 expression levels were higher in COVID-19 patients compared with controls (P&lt; 0.001). Furthermore, CCL2, IL-6, and TNF-α expressions were higher in COVID-19 patients compared to controls (P&lt; 0.001). CCL2 and IL-6 expression levels were significantly higher in patients with severe compared to those with moderate COVID-19 infection (P&lt; 0.001). IL-6 had the highest accuracy in distinguishing COVID-19 patients (AUC=1, P&lt; 0.001 at a cutoff of 0.359), followed by TUG1 (AUC=0.999, P&lt; 0.001 at a cutoff of 2.28). NEAT1 and TUG1 had significant correlations with the measured cytokines, and based on the multivariate regression analysis, NEAT1 is the independent predictor for survival in COVID-19 patients (P=0.02). Conclusion: In COVID-19 patients, significant overexpression of NEAT1 and TUG1 was observed, consistent with cytokine storm. TUG1 could be an efficient diagnostic biomarker, whereas NEAT1 was an independent predictor for overall survival.</abstract><cop>Sydney</cop><pub>Ivyspring International Publisher Pty Ltd</pub><pmid>35982898</pmid><doi>10.7150/ijbs.72318</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record>
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source Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; PubMed Central Open Access
subjects Bacterial infections
Biomarkers
Cancer
Chemokines
Coronaviruses
COVID-19
Cytokine storm
Cytokines
Disease transmission
Dyspnea
Ferritin
Hypoxia
Infections
Inflammation
Interleukin 6
Lymphocytes
Medical prognosis
Monocyte chemoattractant protein 1
Morbidity
Non-coding RNA
Oxygen saturation
Pandemics
Pneumonia
Regression analysis
Research Paper
Sepsis
Severe acute respiratory syndrome coronavirus 2
Survival
Tumor necrosis factor-TNF
Tumor necrosis factor-α
Viral diseases
Viral infections
title Interplay of LncRNAs NEAT1 and TUG1 in Incidence of Cytokine Storm in Appraisal of COVID-19 Infection
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