RASGRF1 Fusions Activate Oncogenic RAS Signaling and Confer Sensitivity to MEK Inhibition
The identification of actionable oncogenic alterations has enabled targeted therapeutic strategies for subsets of patients with advanced malignancies, including lung adenocarcinoma (LUAD). We sought to assess the frequency of known drivers and identify new candidate drivers in a cohort of LUAD from...
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Veröffentlicht in: | Clinical cancer research 2022-07, Vol.28 (14), p.3091-3103 |
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creator | Hunihan, Lisa Zhao, Dejian Lazowski, Heather Li, Man Qian, Yuping Abriola, Laura Surovtseva, Yulia V Muthusamy, Viswanathan Tanoue, Lynn T Rothberg, Bonnie E Gould Schalper, Kurt A Herbst, Roy S Wilson, Frederick H |
description | The identification of actionable oncogenic alterations has enabled targeted therapeutic strategies for subsets of patients with advanced malignancies, including lung adenocarcinoma (LUAD). We sought to assess the frequency of known drivers and identify new candidate drivers in a cohort of LUAD from patients with minimal smoking history.
We performed genomic characterization of 103 LUADs from patients with ≤10 pack-year smoking history. Tumors were subjected to targeted molecular profiling and/or whole-exome sequencing and RNA sequencing in search of established and previously uncharacterized candidate drivers.
We identified an established oncogenic driver in 98 of 103 tumors (95%). From one tumor lacking a known driver, we identified a novel gene rearrangement between OCLN and RASGRF1. The encoded OCLN-RASGRF1 chimera fuses the membrane-spanning portion of the tight junction protein occludin with the catalytic RAS-GEF domain of the RAS activator RASGRF1. We identified a similar SLC4A4-RASGRF1 fusion in a pancreatic ductal adenocarcinoma cell line lacking an activating KRAS mutation and an IQGAP1-RASGRF1 fusion from a sarcoma in The Cancer Genome Atlas. We demonstrate these fusions increase cellular levels of active GTP-RAS, induce cellular transformation, and promote in vivo tumorigenesis. Cells driven by RASGRF1 fusions are sensitive to targeting of the RAF-MEK-ERK pathway in vitro and in vivo.
Our findings credential RASGRF1 fusions as a therapeutic target in multiple malignancies and implicate RAF-MEK-ERK inhibition as a potential treatment strategy for advanced tumors harboring these alterations. See related commentary by Moorthi and Berger, p. 2983. |
doi_str_mv | 10.1158/1078-0432.CCR-21-4291 |
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We performed genomic characterization of 103 LUADs from patients with ≤10 pack-year smoking history. Tumors were subjected to targeted molecular profiling and/or whole-exome sequencing and RNA sequencing in search of established and previously uncharacterized candidate drivers.
We identified an established oncogenic driver in 98 of 103 tumors (95%). From one tumor lacking a known driver, we identified a novel gene rearrangement between OCLN and RASGRF1. The encoded OCLN-RASGRF1 chimera fuses the membrane-spanning portion of the tight junction protein occludin with the catalytic RAS-GEF domain of the RAS activator RASGRF1. We identified a similar SLC4A4-RASGRF1 fusion in a pancreatic ductal adenocarcinoma cell line lacking an activating KRAS mutation and an IQGAP1-RASGRF1 fusion from a sarcoma in The Cancer Genome Atlas. We demonstrate these fusions increase cellular levels of active GTP-RAS, induce cellular transformation, and promote in vivo tumorigenesis. Cells driven by RASGRF1 fusions are sensitive to targeting of the RAF-MEK-ERK pathway in vitro and in vivo.
Our findings credential RASGRF1 fusions as a therapeutic target in multiple malignancies and implicate RAF-MEK-ERK inhibition as a potential treatment strategy for advanced tumors harboring these alterations. See related commentary by Moorthi and Berger, p. 2983.</description><identifier>ISSN: 1078-0432</identifier><identifier>EISSN: 1557-3265</identifier><identifier>DOI: 10.1158/1078-0432.CCR-21-4291</identifier><identifier>PMID: 35247929</identifier><language>eng</language><publisher>United States</publisher><subject>Adenocarcinoma of Lung ; Carcinogenesis - genetics ; Humans ; Lung Neoplasms - drug therapy ; Lung Neoplasms - genetics ; Lung Neoplasms - pathology ; Mitogen-Activated Protein Kinase Kinases ; ras-GRF1 - genetics</subject><ispartof>Clinical cancer research, 2022-07, Vol.28 (14), p.3091-3103</ispartof><rights>2022 American Association for Cancer Research.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c411t-c2700e66381426606cdc84f22ae0839a125fc3df0cb041a1c6512e5fbb90e2df3</citedby><cites>FETCH-LOGICAL-c411t-c2700e66381426606cdc84f22ae0839a125fc3df0cb041a1c6512e5fbb90e2df3</cites><orcidid>0000-0002-2105-3799 ; 0000-0002-7304-6531 ; 0000-0002-5019-0186 ; 0000-0002-8919-4467</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,3343,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35247929$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hunihan, Lisa</creatorcontrib><creatorcontrib>Zhao, Dejian</creatorcontrib><creatorcontrib>Lazowski, Heather</creatorcontrib><creatorcontrib>Li, Man</creatorcontrib><creatorcontrib>Qian, Yuping</creatorcontrib><creatorcontrib>Abriola, Laura</creatorcontrib><creatorcontrib>Surovtseva, Yulia V</creatorcontrib><creatorcontrib>Muthusamy, Viswanathan</creatorcontrib><creatorcontrib>Tanoue, Lynn T</creatorcontrib><creatorcontrib>Rothberg, Bonnie E Gould</creatorcontrib><creatorcontrib>Schalper, Kurt A</creatorcontrib><creatorcontrib>Herbst, Roy S</creatorcontrib><creatorcontrib>Wilson, Frederick H</creatorcontrib><title>RASGRF1 Fusions Activate Oncogenic RAS Signaling and Confer Sensitivity to MEK Inhibition</title><title>Clinical cancer research</title><addtitle>Clin Cancer Res</addtitle><description>The identification of actionable oncogenic alterations has enabled targeted therapeutic strategies for subsets of patients with advanced malignancies, including lung adenocarcinoma (LUAD). We sought to assess the frequency of known drivers and identify new candidate drivers in a cohort of LUAD from patients with minimal smoking history.
We performed genomic characterization of 103 LUADs from patients with ≤10 pack-year smoking history. Tumors were subjected to targeted molecular profiling and/or whole-exome sequencing and RNA sequencing in search of established and previously uncharacterized candidate drivers.
We identified an established oncogenic driver in 98 of 103 tumors (95%). From one tumor lacking a known driver, we identified a novel gene rearrangement between OCLN and RASGRF1. The encoded OCLN-RASGRF1 chimera fuses the membrane-spanning portion of the tight junction protein occludin with the catalytic RAS-GEF domain of the RAS activator RASGRF1. We identified a similar SLC4A4-RASGRF1 fusion in a pancreatic ductal adenocarcinoma cell line lacking an activating KRAS mutation and an IQGAP1-RASGRF1 fusion from a sarcoma in The Cancer Genome Atlas. We demonstrate these fusions increase cellular levels of active GTP-RAS, induce cellular transformation, and promote in vivo tumorigenesis. Cells driven by RASGRF1 fusions are sensitive to targeting of the RAF-MEK-ERK pathway in vitro and in vivo.
Our findings credential RASGRF1 fusions as a therapeutic target in multiple malignancies and implicate RAF-MEK-ERK inhibition as a potential treatment strategy for advanced tumors harboring these alterations. See related commentary by Moorthi and Berger, p. 2983.</description><subject>Adenocarcinoma of Lung</subject><subject>Carcinogenesis - genetics</subject><subject>Humans</subject><subject>Lung Neoplasms - drug therapy</subject><subject>Lung Neoplasms - genetics</subject><subject>Lung Neoplasms - pathology</subject><subject>Mitogen-Activated Protein Kinase Kinases</subject><subject>ras-GRF1 - genetics</subject><issn>1078-0432</issn><issn>1557-3265</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkFtPwjAUxxujEUQ_gqZfYNjTyy4vJmQBJGJIQB98arquGzXQkXWQ8O3dghB9Oifn_C_JD6FHIEMAET8DieKAcEaHaboMKAScJnCF-iBEFDAaiut2P2t66M77b0KAA-G3qMcE5VFCkz76Wo5W0-UE8GTvbeU8HunGHlRj8MLpqjTOatxK8MqWTm2sK7FyOU4rV5gar4zztpXb5oibCr-P3_DMrW3W3ip3j24KtfHm4XcO0Odk_JG-BvPFdJaO5oHmAE2gaUSICUMWA6dhSEKd65gXlCpDYpYooKLQLC-IzggHBToUQI0osiwhhuYFG6CXU-5un21Nro1rarWRu9puVX2UlbLy_8fZtSyrg0xoHAvC2gBxCtB15X1tiosXiOxYy46j7DjKlrWkIDvWre_pb_HFdYbLfgAPl3sO</recordid><startdate>20220715</startdate><enddate>20220715</enddate><creator>Hunihan, Lisa</creator><creator>Zhao, Dejian</creator><creator>Lazowski, Heather</creator><creator>Li, Man</creator><creator>Qian, Yuping</creator><creator>Abriola, Laura</creator><creator>Surovtseva, Yulia V</creator><creator>Muthusamy, Viswanathan</creator><creator>Tanoue, Lynn T</creator><creator>Rothberg, Bonnie E Gould</creator><creator>Schalper, Kurt A</creator><creator>Herbst, Roy S</creator><creator>Wilson, Frederick H</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-2105-3799</orcidid><orcidid>https://orcid.org/0000-0002-7304-6531</orcidid><orcidid>https://orcid.org/0000-0002-5019-0186</orcidid><orcidid>https://orcid.org/0000-0002-8919-4467</orcidid></search><sort><creationdate>20220715</creationdate><title>RASGRF1 Fusions Activate Oncogenic RAS Signaling and Confer Sensitivity to MEK Inhibition</title><author>Hunihan, Lisa ; Zhao, Dejian ; Lazowski, Heather ; Li, Man ; Qian, Yuping ; Abriola, Laura ; Surovtseva, Yulia V ; Muthusamy, Viswanathan ; Tanoue, Lynn T ; Rothberg, Bonnie E Gould ; Schalper, Kurt A ; Herbst, Roy S ; Wilson, Frederick H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c411t-c2700e66381426606cdc84f22ae0839a125fc3df0cb041a1c6512e5fbb90e2df3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Adenocarcinoma of Lung</topic><topic>Carcinogenesis - genetics</topic><topic>Humans</topic><topic>Lung Neoplasms - drug therapy</topic><topic>Lung Neoplasms - genetics</topic><topic>Lung Neoplasms - pathology</topic><topic>Mitogen-Activated Protein Kinase Kinases</topic><topic>ras-GRF1 - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hunihan, Lisa</creatorcontrib><creatorcontrib>Zhao, Dejian</creatorcontrib><creatorcontrib>Lazowski, Heather</creatorcontrib><creatorcontrib>Li, Man</creatorcontrib><creatorcontrib>Qian, Yuping</creatorcontrib><creatorcontrib>Abriola, Laura</creatorcontrib><creatorcontrib>Surovtseva, Yulia V</creatorcontrib><creatorcontrib>Muthusamy, Viswanathan</creatorcontrib><creatorcontrib>Tanoue, Lynn T</creatorcontrib><creatorcontrib>Rothberg, Bonnie E Gould</creatorcontrib><creatorcontrib>Schalper, Kurt A</creatorcontrib><creatorcontrib>Herbst, Roy S</creatorcontrib><creatorcontrib>Wilson, Frederick H</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Clinical cancer research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hunihan, Lisa</au><au>Zhao, Dejian</au><au>Lazowski, Heather</au><au>Li, Man</au><au>Qian, Yuping</au><au>Abriola, Laura</au><au>Surovtseva, Yulia V</au><au>Muthusamy, Viswanathan</au><au>Tanoue, Lynn T</au><au>Rothberg, Bonnie E Gould</au><au>Schalper, Kurt A</au><au>Herbst, Roy S</au><au>Wilson, Frederick H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>RASGRF1 Fusions Activate Oncogenic RAS Signaling and Confer Sensitivity to MEK Inhibition</atitle><jtitle>Clinical cancer research</jtitle><addtitle>Clin Cancer Res</addtitle><date>2022-07-15</date><risdate>2022</risdate><volume>28</volume><issue>14</issue><spage>3091</spage><epage>3103</epage><pages>3091-3103</pages><issn>1078-0432</issn><eissn>1557-3265</eissn><abstract>The identification of actionable oncogenic alterations has enabled targeted therapeutic strategies for subsets of patients with advanced malignancies, including lung adenocarcinoma (LUAD). We sought to assess the frequency of known drivers and identify new candidate drivers in a cohort of LUAD from patients with minimal smoking history.
We performed genomic characterization of 103 LUADs from patients with ≤10 pack-year smoking history. Tumors were subjected to targeted molecular profiling and/or whole-exome sequencing and RNA sequencing in search of established and previously uncharacterized candidate drivers.
We identified an established oncogenic driver in 98 of 103 tumors (95%). From one tumor lacking a known driver, we identified a novel gene rearrangement between OCLN and RASGRF1. The encoded OCLN-RASGRF1 chimera fuses the membrane-spanning portion of the tight junction protein occludin with the catalytic RAS-GEF domain of the RAS activator RASGRF1. We identified a similar SLC4A4-RASGRF1 fusion in a pancreatic ductal adenocarcinoma cell line lacking an activating KRAS mutation and an IQGAP1-RASGRF1 fusion from a sarcoma in The Cancer Genome Atlas. We demonstrate these fusions increase cellular levels of active GTP-RAS, induce cellular transformation, and promote in vivo tumorigenesis. Cells driven by RASGRF1 fusions are sensitive to targeting of the RAF-MEK-ERK pathway in vitro and in vivo.
Our findings credential RASGRF1 fusions as a therapeutic target in multiple malignancies and implicate RAF-MEK-ERK inhibition as a potential treatment strategy for advanced tumors harboring these alterations. See related commentary by Moorthi and Berger, p. 2983.</abstract><cop>United States</cop><pmid>35247929</pmid><doi>10.1158/1078-0432.CCR-21-4291</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-2105-3799</orcidid><orcidid>https://orcid.org/0000-0002-7304-6531</orcidid><orcidid>https://orcid.org/0000-0002-5019-0186</orcidid><orcidid>https://orcid.org/0000-0002-8919-4467</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Adenocarcinoma of Lung Carcinogenesis - genetics Humans Lung Neoplasms - drug therapy Lung Neoplasms - genetics Lung Neoplasms - pathology Mitogen-Activated Protein Kinase Kinases ras-GRF1 - genetics |
title | RASGRF1 Fusions Activate Oncogenic RAS Signaling and Confer Sensitivity to MEK Inhibition |
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