Proteomic Quantification of Lysine Acetylation and Succinylation Profile Alterations in Lung Adenocarcinomas of Non-Smoking Females

[ABSTRACT] [Background] Epidemiological surveys in recent years have shown that the incidence of female lung adenocarcinomas has multiplied in both smoking and non-smoking populations. The cause of lung adenocarcinomas is still not clear. Protein post-translational modification is one of the causes...

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Veröffentlicht in:YONAGO ACTA MEDICA 2022, Vol.65 (2), p.132-147, Article 2022.05.006
Hauptverfasser: Wu, Jun, Li, Ning, Huang, Xiaoqin, Chen, Jianming, Jia, Yufang, He, Zhan, Mo, Ting, He, Liuyan, Wang, Yajun, Zhang, Haitao
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container_issue 2
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container_title YONAGO ACTA MEDICA
container_volume 65
creator Wu, Jun
Li, Ning
Huang, Xiaoqin
Chen, Jianming
Jia, Yufang
He, Zhan
Mo, Ting
He, Liuyan
Wang, Yajun
Zhang, Haitao
description [ABSTRACT] [Background] Epidemiological surveys in recent years have shown that the incidence of female lung adenocarcinomas has multiplied in both smoking and non-smoking populations. The cause of lung adenocarcinomas is still not clear. Protein post-translational modification is one of the causes of the development of cancer cells. [Methods] Lung adenocarcinoma and paracancerous tissue samples were collected from female patients with no history of smoking. The differences in protein acetylation and succinylation of cancerous tissues and paracancerous tissues were analysed by LC-MS/MS with a TMT labelling method. We distinguished the differentially modified proteins and annotated these proteins in terms of Go annotation, protein domains, protein complex analysis and KEGG pathway analysis. [Results] 972 acetylation sites on 556 proteins were identified, among which 875 Kac sites on 507 proteins were quantified, 2373 succinylation sites on 1205 proteins were identified, and 2205 Ksu sites on 1131 proteins were quantified. The acetylation levels of proteins, which contribute to DNA binding and gene expression regulation, were up-regulated. The proteins for which the succinylation levels were up-regulated were mainly involved in mitochondria carboxylic acid metabolism. We also identified simultaneously up-regulated or down-regulated acetylated and succinylated proteins and depicted their interaction network. [Conclusion] This study provides insight into lung adenocarcinomas acetylation and succinylation profile alterations in carcinoma pathogenesis and provides a potential therapeutic target for lung adenocarcinomas.
doi_str_mv 10.33160/yam.2022.05.006
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The cause of lung adenocarcinomas is still not clear. Protein post-translational modification is one of the causes of the development of cancer cells. [Methods] Lung adenocarcinoma and paracancerous tissue samples were collected from female patients with no history of smoking. The differences in protein acetylation and succinylation of cancerous tissues and paracancerous tissues were analysed by LC-MS/MS with a TMT labelling method. We distinguished the differentially modified proteins and annotated these proteins in terms of Go annotation, protein domains, protein complex analysis and KEGG pathway analysis. [Results] 972 acetylation sites on 556 proteins were identified, among which 875 Kac sites on 507 proteins were quantified, 2373 succinylation sites on 1205 proteins were identified, and 2205 Ksu sites on 1131 proteins were quantified. The acetylation levels of proteins, which contribute to DNA binding and gene expression regulation, were up-regulated. The proteins for which the succinylation levels were up-regulated were mainly involved in mitochondria carboxylic acid metabolism. We also identified simultaneously up-regulated or down-regulated acetylated and succinylated proteins and depicted their interaction network. [Conclusion] This study provides insight into lung adenocarcinomas acetylation and succinylation profile alterations in carcinoma pathogenesis and provides a potential therapeutic target for lung adenocarcinomas.</description><identifier>ISSN: 0513-5710</identifier><identifier>ISSN: 1346-8049</identifier><identifier>EISSN: 1346-8049</identifier><identifier>DOI: 10.33160/yam.2022.05.006</identifier><identifier>PMID: 35611055</identifier><language>eng</language><publisher>Japan: Tottori University Medical Press</publisher><subject>Original</subject><ispartof>YONAGO ACTA MEDICA, 2022, Vol.65 (2), p.132-147, Article 2022.05.006</ispartof><rights>2022 Tottori University Medical Press.</rights><rights>2022 Tottori University Medical Press 2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5846-6bc99d84e58cceb2b574a6ce205371761d07019ad23955493292f7400ddc8fdc3</citedby><cites>FETCH-LOGICAL-c5846-6bc99d84e58cceb2b574a6ce205371761d07019ad23955493292f7400ddc8fdc3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9123256/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9123256/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,4023,27922,27923,27924,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35611055$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wu, Jun</creatorcontrib><creatorcontrib>Li, Ning</creatorcontrib><creatorcontrib>Huang, Xiaoqin</creatorcontrib><creatorcontrib>Chen, Jianming</creatorcontrib><creatorcontrib>Jia, Yufang</creatorcontrib><creatorcontrib>He, Zhan</creatorcontrib><creatorcontrib>Mo, Ting</creatorcontrib><creatorcontrib>He, Liuyan</creatorcontrib><creatorcontrib>Wang, Yajun</creatorcontrib><creatorcontrib>Zhang, Haitao</creatorcontrib><creatorcontrib>Department of Respiratory medicine</creatorcontrib><creatorcontrib>Guangdong Medical University</creatorcontrib><creatorcontrib>The Fourth People's Hospital of Foshan</creatorcontrib><creatorcontrib>Affiliated Hospital of Guangdong Medical University</creatorcontrib><creatorcontrib>Peptide and Protein Research and Application Key Laboratory of Guangdong Medical University</creatorcontrib><creatorcontrib>Department of Biochemistry and Molecular Biology</creatorcontrib><creatorcontrib>Southern Marine Science and Engineering Guangdong Laboratory (Zhanjiang</creatorcontrib><title>Proteomic Quantification of Lysine Acetylation and Succinylation Profile Alterations in Lung Adenocarcinomas of Non-Smoking Females</title><title>YONAGO ACTA MEDICA</title><addtitle>Yonago Acta Med</addtitle><description>[ABSTRACT] [Background] Epidemiological surveys in recent years have shown that the incidence of female lung adenocarcinomas has multiplied in both smoking and non-smoking populations. The cause of lung adenocarcinomas is still not clear. Protein post-translational modification is one of the causes of the development of cancer cells. [Methods] Lung adenocarcinoma and paracancerous tissue samples were collected from female patients with no history of smoking. The differences in protein acetylation and succinylation of cancerous tissues and paracancerous tissues were analysed by LC-MS/MS with a TMT labelling method. We distinguished the differentially modified proteins and annotated these proteins in terms of Go annotation, protein domains, protein complex analysis and KEGG pathway analysis. [Results] 972 acetylation sites on 556 proteins were identified, among which 875 Kac sites on 507 proteins were quantified, 2373 succinylation sites on 1205 proteins were identified, and 2205 Ksu sites on 1131 proteins were quantified. The acetylation levels of proteins, which contribute to DNA binding and gene expression regulation, were up-regulated. The proteins for which the succinylation levels were up-regulated were mainly involved in mitochondria carboxylic acid metabolism. We also identified simultaneously up-regulated or down-regulated acetylated and succinylated proteins and depicted their interaction network. [Conclusion] This study provides insight into lung adenocarcinomas acetylation and succinylation profile alterations in carcinoma pathogenesis and provides a potential therapeutic target for lung adenocarcinomas.</description><subject>Original</subject><issn>0513-5710</issn><issn>1346-8049</issn><issn>1346-8049</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNpVkc1v3CAQxVHUKtmmuecU-diLtwMYbC6VVlGSVlr1Q2nOiAW8IcGQgl3J5_7jZbObqD0NmvfmAfND6BzDklLM4eOshiUBQpbAlgD8CC0wbXjdQSPeoAUwTGvWYjhB73J-AGgoA36MTijjGANjC_Tne4qjjYPT1Y9JhdH1TqvRxVDFvlrP2QVbrbQdZ7_vqmCq20lrF146JaB3vrj8aNNzK1cuVOspbKuVsSFqlYo9DirvMr_GUN8O8dEV-doOytv8Hr3tlc_27FBP0d311c_Lz_X6282Xy9W61qwrn-IbLYTpGss6re2GbFjbKK4tAUZb3HJsoAUslCFUMNYISgTp2wbAGN31RtNT9Gmf-zRtBmu0DWNSXj4lN6g0y6ic_F8J7l5u428pMKGE8RLw4RCQ4q_J5lEOLmvrvQo2TlkSzgUD2gkoVthbdYo5J9u_XoNBPrOThZ3csZPAZGFXRi7-fd7rwAusYrjZG4paKPkYfMEjH-KUQtmbNI7MMajtIRU4g12hEjAtB9yUZeAOWkb_AiZ2rqY</recordid><startdate>2022</startdate><enddate>2022</enddate><creator>Wu, Jun</creator><creator>Li, Ning</creator><creator>Huang, Xiaoqin</creator><creator>Chen, Jianming</creator><creator>Jia, Yufang</creator><creator>He, Zhan</creator><creator>Mo, Ting</creator><creator>He, Liuyan</creator><creator>Wang, Yajun</creator><creator>Zhang, Haitao</creator><general>Tottori University Medical Press</general><general>YAM</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>2022</creationdate><title>Proteomic Quantification of Lysine Acetylation and Succinylation Profile Alterations in Lung Adenocarcinomas of Non-Smoking Females</title><author>Wu, Jun ; Li, Ning ; Huang, Xiaoqin ; Chen, Jianming ; Jia, Yufang ; He, Zhan ; Mo, Ting ; He, Liuyan ; Wang, Yajun ; Zhang, Haitao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5846-6bc99d84e58cceb2b574a6ce205371761d07019ad23955493292f7400ddc8fdc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Original</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wu, Jun</creatorcontrib><creatorcontrib>Li, Ning</creatorcontrib><creatorcontrib>Huang, Xiaoqin</creatorcontrib><creatorcontrib>Chen, Jianming</creatorcontrib><creatorcontrib>Jia, Yufang</creatorcontrib><creatorcontrib>He, Zhan</creatorcontrib><creatorcontrib>Mo, Ting</creatorcontrib><creatorcontrib>He, Liuyan</creatorcontrib><creatorcontrib>Wang, Yajun</creatorcontrib><creatorcontrib>Zhang, Haitao</creatorcontrib><creatorcontrib>Department of Respiratory medicine</creatorcontrib><creatorcontrib>Guangdong Medical University</creatorcontrib><creatorcontrib>The Fourth People's Hospital of Foshan</creatorcontrib><creatorcontrib>Affiliated Hospital of Guangdong Medical University</creatorcontrib><creatorcontrib>Peptide and Protein Research and Application Key Laboratory of Guangdong Medical University</creatorcontrib><creatorcontrib>Department of Biochemistry and Molecular Biology</creatorcontrib><creatorcontrib>Southern Marine Science and Engineering Guangdong Laboratory (Zhanjiang</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>YONAGO ACTA MEDICA</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wu, Jun</au><au>Li, Ning</au><au>Huang, Xiaoqin</au><au>Chen, Jianming</au><au>Jia, Yufang</au><au>He, Zhan</au><au>Mo, Ting</au><au>He, Liuyan</au><au>Wang, Yajun</au><au>Zhang, Haitao</au><aucorp>Department of Respiratory medicine</aucorp><aucorp>Guangdong Medical University</aucorp><aucorp>The Fourth People's Hospital of Foshan</aucorp><aucorp>Affiliated Hospital of Guangdong Medical University</aucorp><aucorp>Peptide and Protein Research and Application Key Laboratory of Guangdong Medical University</aucorp><aucorp>Department of Biochemistry and Molecular Biology</aucorp><aucorp>Southern Marine Science and Engineering Guangdong Laboratory (Zhanjiang</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Proteomic Quantification of Lysine Acetylation and Succinylation Profile Alterations in Lung Adenocarcinomas of Non-Smoking Females</atitle><jtitle>YONAGO ACTA MEDICA</jtitle><addtitle>Yonago Acta Med</addtitle><date>2022</date><risdate>2022</risdate><volume>65</volume><issue>2</issue><spage>132</spage><epage>147</epage><pages>132-147</pages><artnum>2022.05.006</artnum><issn>0513-5710</issn><issn>1346-8049</issn><eissn>1346-8049</eissn><abstract>[ABSTRACT] [Background] Epidemiological surveys in recent years have shown that the incidence of female lung adenocarcinomas has multiplied in both smoking and non-smoking populations. The cause of lung adenocarcinomas is still not clear. Protein post-translational modification is one of the causes of the development of cancer cells. [Methods] Lung adenocarcinoma and paracancerous tissue samples were collected from female patients with no history of smoking. The differences in protein acetylation and succinylation of cancerous tissues and paracancerous tissues were analysed by LC-MS/MS with a TMT labelling method. We distinguished the differentially modified proteins and annotated these proteins in terms of Go annotation, protein domains, protein complex analysis and KEGG pathway analysis. [Results] 972 acetylation sites on 556 proteins were identified, among which 875 Kac sites on 507 proteins were quantified, 2373 succinylation sites on 1205 proteins were identified, and 2205 Ksu sites on 1131 proteins were quantified. The acetylation levels of proteins, which contribute to DNA binding and gene expression regulation, were up-regulated. The proteins for which the succinylation levels were up-regulated were mainly involved in mitochondria carboxylic acid metabolism. We also identified simultaneously up-regulated or down-regulated acetylated and succinylated proteins and depicted their interaction network. [Conclusion] This study provides insight into lung adenocarcinomas acetylation and succinylation profile alterations in carcinoma pathogenesis and provides a potential therapeutic target for lung adenocarcinomas.</abstract><cop>Japan</cop><pub>Tottori University Medical Press</pub><pmid>35611055</pmid><doi>10.33160/yam.2022.05.006</doi><tpages>16</tpages><oa>free_for_read</oa></addata></record>
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title Proteomic Quantification of Lysine Acetylation and Succinylation Profile Alterations in Lung Adenocarcinomas of Non-Smoking Females
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