Unveiling Genetic Diversity, Characterization, and Selection of Bambara Groundnut (Vigna subterranea L. Verdc) Genotypes Reflecting Yield and Yield Components in Tropical Malaysia
Addressing genetic diversity and application of appropriate breeding strategies are imperative for Bambara groundnut (Vigna subterranea L.) improvement as a newly introduced legume in Malaysia. It has become a “miracle lucrative” legume for Asia and Africa because of its drought resilience, excellen...
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description | Addressing genetic diversity and application of appropriate breeding strategies are imperative for Bambara groundnut (Vigna subterranea L.) improvement as a newly introduced legume in Malaysia. It has become a “miracle lucrative” legume for Asia and Africa because of its drought resilience, excellent nutritional profiles, and versatile uses. This crop’s progress has been limited owing to a lack of extensive research, marginalization, inadequate knowledge, and a lack of accessible funds, among other concerns. The expansion of this crop is reliant on the assessment and selection of unique and reliable breeding lines in various circumstances. Consequently, the goal of this work is to determine genetic diversity and the relationship between yield-contributing components in 44 Bambara groundnut accessions sourced from the Genebank of Institute of Tropical Agriculture and Food Security (ITAFoS) at Universiti Putra Malaysia (UPM). Three replications were used in the experiment, which was done using a randomized complete block design (RCBD). The data were subjected to ANOVA, PCA, correlation, and heat map cluster analysis; also, genetic parameters and broad-sense heritability estimation were carried out on recorded phenotypic descriptors. All of the investigated variables had a significant variance (p≤0.05 or 0.01) according to the ANOVA results. Yield per hectare showed a positively strong to perfect significant correlation (0.75≤r≤1.00; p≤0.01) with the yield components viz. fresh pod weight, hundred seed weight, dry pod weight, and dry seed weight. Interestingly, these traits had heritability≥60% and genetic gain≥20%, which can be beneficial for direct selection to this crop improvement. The UPGMA clustering revealed five distinct clusters in which genotypes under cluster I, cluster II, and cluster IV produce a greater yield of 5.96%, 7.12%, and 15.05%, respectively, than the grand mean yield of 1927.01 kg/ha. The PCA biplot estimated that PC1 (32.9%) and PC2 (12.9%) would cover 45.8% of the total variance. We discovered 30 promising lines that provide yields per hectare more than 1.8 ton/ha and might be used as parental lines in future breeding operations aimed at improving the grain yield in tropical areas or comparable agroecological zones. |
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Verdc) Genotypes Reflecting Yield and Yield Components in Tropical Malaysia</title><source>MEDLINE</source><source>PubMed Central Open Access</source><source>Wiley Online Library (Open Access Collection)</source><source>PubMed Central</source><source>Alma/SFX Local Collection</source><creator>Khan, Md Mahmudul Hasan ; Rafii, Mohd Y. ; Ramlee, Shairul Izan ; Jusoh, Mashitah ; Oladosu, Yusuff ; Al Mamun, Md ; Khaliqi, Atiqullah</creator><contributor>Sun, Fengjie ; Fengjie Sun</contributor><creatorcontrib>Khan, Md Mahmudul Hasan ; Rafii, Mohd Y. ; Ramlee, Shairul Izan ; Jusoh, Mashitah ; Oladosu, Yusuff ; Al Mamun, Md ; Khaliqi, Atiqullah ; Sun, Fengjie ; Fengjie Sun</creatorcontrib><description>Addressing genetic diversity and application of appropriate breeding strategies are imperative for Bambara groundnut (Vigna subterranea L.) improvement as a newly introduced legume in Malaysia. It has become a “miracle lucrative” legume for Asia and Africa because of its drought resilience, excellent nutritional profiles, and versatile uses. This crop’s progress has been limited owing to a lack of extensive research, marginalization, inadequate knowledge, and a lack of accessible funds, among other concerns. The expansion of this crop is reliant on the assessment and selection of unique and reliable breeding lines in various circumstances. Consequently, the goal of this work is to determine genetic diversity and the relationship between yield-contributing components in 44 Bambara groundnut accessions sourced from the Genebank of Institute of Tropical Agriculture and Food Security (ITAFoS) at Universiti Putra Malaysia (UPM). Three replications were used in the experiment, which was done using a randomized complete block design (RCBD). The data were subjected to ANOVA, PCA, correlation, and heat map cluster analysis; also, genetic parameters and broad-sense heritability estimation were carried out on recorded phenotypic descriptors. All of the investigated variables had a significant variance (p≤0.05 or 0.01) according to the ANOVA results. Yield per hectare showed a positively strong to perfect significant correlation (0.75≤r≤1.00; p≤0.01) with the yield components viz. fresh pod weight, hundred seed weight, dry pod weight, and dry seed weight. Interestingly, these traits had heritability≥60% and genetic gain≥20%, which can be beneficial for direct selection to this crop improvement. The UPGMA clustering revealed five distinct clusters in which genotypes under cluster I, cluster II, and cluster IV produce a greater yield of 5.96%, 7.12%, and 15.05%, respectively, than the grand mean yield of 1927.01 kg/ha. The PCA biplot estimated that PC1 (32.9%) and PC2 (12.9%) would cover 45.8% of the total variance. We discovered 30 promising lines that provide yields per hectare more than 1.8 ton/ha and might be used as parental lines in future breeding operations aimed at improving the grain yield in tropical areas or comparable agroecological zones.</description><identifier>ISSN: 2314-6133</identifier><identifier>EISSN: 2314-6141</identifier><identifier>DOI: 10.1155/2022/6794475</identifier><identifier>PMID: 35528153</identifier><language>eng</language><publisher>United States: Hindawi</publisher><subject>Agricultural production ; Agricultural research ; Bambara groundnut ; Beans ; Biological diversity ; Biomedical research ; Breeding ; Cluster analysis ; Clustering ; Crop improvement ; Crop yield ; Crop yields ; Crops ; Cultivars ; Drought ; Fabaceae - genetics ; Food ; Food security ; Genetic analysis ; Genetic aspects ; Genetic diversity ; Genetic research ; Genetic Variation - genetics ; Genotype ; Genotypes ; Groundnuts ; Heritability ; Hunger ; Inheritances ; Legumes ; Malaysia ; Mimosaceae ; Plant Breeding ; Production processes ; R&D ; Research & development ; Research parks ; Security ; Seeds ; Tropical crops ; Variance ; Variance analysis ; Vigna - genetics ; Vigna subterranea ; Weight</subject><ispartof>BioMed research international, 2022-04, Vol.2022, p.6794475-23</ispartof><rights>Copyright © 2022 Md Mahmudul Hasan Khan et al.</rights><rights>COPYRIGHT 2022 John Wiley & Sons, Inc.</rights><rights>Copyright © 2022 Md Mahmudul Hasan Khan et al. This is an open access article distributed under the Creative Commons Attribution License (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. https://creativecommons.org/licenses/by/4.0</rights><rights>Copyright © 2022 Md Mahmudul Hasan Khan et al. 2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c406t-6fe42aae36b8a8cf745de10f8836659662ec472893ba5a3b229603ec2dce6e393</citedby><cites>FETCH-LOGICAL-c406t-6fe42aae36b8a8cf745de10f8836659662ec472893ba5a3b229603ec2dce6e393</cites><orcidid>0000-0001-8195-3783 ; 0000-0002-2092-971X ; 0000-0003-4763-6367</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9071916/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9071916/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35528153$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Sun, Fengjie</contributor><contributor>Fengjie Sun</contributor><creatorcontrib>Khan, Md Mahmudul Hasan</creatorcontrib><creatorcontrib>Rafii, Mohd Y.</creatorcontrib><creatorcontrib>Ramlee, Shairul Izan</creatorcontrib><creatorcontrib>Jusoh, Mashitah</creatorcontrib><creatorcontrib>Oladosu, Yusuff</creatorcontrib><creatorcontrib>Al Mamun, Md</creatorcontrib><creatorcontrib>Khaliqi, Atiqullah</creatorcontrib><title>Unveiling Genetic Diversity, Characterization, and Selection of Bambara Groundnut (Vigna subterranea L. Verdc) Genotypes Reflecting Yield and Yield Components in Tropical Malaysia</title><title>BioMed research international</title><addtitle>Biomed Res Int</addtitle><description>Addressing genetic diversity and application of appropriate breeding strategies are imperative for Bambara groundnut (Vigna subterranea L.) improvement as a newly introduced legume in Malaysia. It has become a “miracle lucrative” legume for Asia and Africa because of its drought resilience, excellent nutritional profiles, and versatile uses. This crop’s progress has been limited owing to a lack of extensive research, marginalization, inadequate knowledge, and a lack of accessible funds, among other concerns. The expansion of this crop is reliant on the assessment and selection of unique and reliable breeding lines in various circumstances. 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Interestingly, these traits had heritability≥60% and genetic gain≥20%, which can be beneficial for direct selection to this crop improvement. The UPGMA clustering revealed five distinct clusters in which genotypes under cluster I, cluster II, and cluster IV produce a greater yield of 5.96%, 7.12%, and 15.05%, respectively, than the grand mean yield of 1927.01 kg/ha. The PCA biplot estimated that PC1 (32.9%) and PC2 (12.9%) would cover 45.8% of the total variance. We discovered 30 promising lines that provide yields per hectare more than 1.8 ton/ha and might be used as parental lines in future breeding operations aimed at improving the grain yield in tropical areas or comparable agroecological zones.</description><subject>Agricultural production</subject><subject>Agricultural research</subject><subject>Bambara groundnut</subject><subject>Beans</subject><subject>Biological diversity</subject><subject>Biomedical research</subject><subject>Breeding</subject><subject>Cluster analysis</subject><subject>Clustering</subject><subject>Crop improvement</subject><subject>Crop yield</subject><subject>Crop yields</subject><subject>Crops</subject><subject>Cultivars</subject><subject>Drought</subject><subject>Fabaceae - genetics</subject><subject>Food</subject><subject>Food security</subject><subject>Genetic analysis</subject><subject>Genetic aspects</subject><subject>Genetic diversity</subject><subject>Genetic research</subject><subject>Genetic Variation - genetics</subject><subject>Genotype</subject><subject>Genotypes</subject><subject>Groundnuts</subject><subject>Heritability</subject><subject>Hunger</subject><subject>Inheritances</subject><subject>Legumes</subject><subject>Malaysia</subject><subject>Mimosaceae</subject><subject>Plant Breeding</subject><subject>Production processes</subject><subject>R&D</subject><subject>Research & development</subject><subject>Research parks</subject><subject>Security</subject><subject>Seeds</subject><subject>Tropical crops</subject><subject>Variance</subject><subject>Variance analysis</subject><subject>Vigna - genetics</subject><subject>Vigna subterranea</subject><subject>Weight</subject><issn>2314-6133</issn><issn>2314-6141</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>RHX</sourceid><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kk1v1DAQhiMEolXpjTOyxKWI3dYfiZNcKpUFFqRFSNBW4mRNnMmuq6wd7GTR8rf4gzjdZfk44IvH9uN3PJ43SZ4yes5Yll1wyvmFzMs0zbMHyTEXLJ1KlrKHh1iIo-Q0hDsaR8EkLeXj5EhkGS9YJo6THzd2g6Y1dknmaLE3mrw2G_TB9NsJma3Ag-7Rm-_QG2cnBGxNPmOLelwS15BXsK4iRObeDba2Q0_Obs3SAglDFS96sAhkcU5u0df6xZjE9dsOA_mEzb1MzPzFYFvfS--imVt3zqLtAzGWXHvXGQ0t-QAtbIOBJ8mjBtqAp_v5JLl5--Z69m66-Dh_P7taTHVKZT-VDaYcAIWsCih0k6dZjYw2RSGkzEopOeo050UpKshAVJyXkgrUvNYoUZTiJLnc6XZDtca4a3sPreq8WYPfKgdG_X1izUot3UaVNGclk1HgbC_g3dcBQ6_WJmhs2_gpbgiKy9irIpU5j-jzf9A7N3gbyxspmmdp7N1vagktKmMbF_PqUVRd5ZSXQgqeR2qyo7R3IXhsDk9mVI22UaNt1N42EX_2Z5kH-JdJIvByB6yMreGb-b_cT8qQy4c</recordid><startdate>20220426</startdate><enddate>20220426</enddate><creator>Khan, Md Mahmudul Hasan</creator><creator>Rafii, Mohd Y.</creator><creator>Ramlee, Shairul Izan</creator><creator>Jusoh, Mashitah</creator><creator>Oladosu, Yusuff</creator><creator>Al Mamun, Md</creator><creator>Khaliqi, Atiqullah</creator><general>Hindawi</general><general>John Wiley & Sons, Inc</general><general>Hindawi Limited</general><scope>RHU</scope><scope>RHW</scope><scope>RHX</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QO</scope><scope>7T7</scope><scope>7TK</scope><scope>7U7</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>CWDGH</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-8195-3783</orcidid><orcidid>https://orcid.org/0000-0002-2092-971X</orcidid><orcidid>https://orcid.org/0000-0003-4763-6367</orcidid></search><sort><creationdate>20220426</creationdate><title>Unveiling Genetic Diversity, Characterization, and Selection of Bambara Groundnut (Vigna subterranea L. Verdc) Genotypes Reflecting Yield and Yield Components in Tropical Malaysia</title><author>Khan, Md Mahmudul Hasan ; Rafii, Mohd Y. ; Ramlee, Shairul Izan ; Jusoh, Mashitah ; Oladosu, Yusuff ; Al Mamun, Md ; Khaliqi, Atiqullah</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c406t-6fe42aae36b8a8cf745de10f8836659662ec472893ba5a3b229603ec2dce6e393</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Agricultural production</topic><topic>Agricultural research</topic><topic>Bambara groundnut</topic><topic>Beans</topic><topic>Biological diversity</topic><topic>Biomedical research</topic><topic>Breeding</topic><topic>Cluster analysis</topic><topic>Clustering</topic><topic>Crop improvement</topic><topic>Crop yield</topic><topic>Crop yields</topic><topic>Crops</topic><topic>Cultivars</topic><topic>Drought</topic><topic>Fabaceae - genetics</topic><topic>Food</topic><topic>Food security</topic><topic>Genetic analysis</topic><topic>Genetic aspects</topic><topic>Genetic diversity</topic><topic>Genetic research</topic><topic>Genetic Variation - 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Verdc) Genotypes Reflecting Yield and Yield Components in Tropical Malaysia</atitle><jtitle>BioMed research international</jtitle><addtitle>Biomed Res Int</addtitle><date>2022-04-26</date><risdate>2022</risdate><volume>2022</volume><spage>6794475</spage><epage>23</epage><pages>6794475-23</pages><issn>2314-6133</issn><eissn>2314-6141</eissn><abstract>Addressing genetic diversity and application of appropriate breeding strategies are imperative for Bambara groundnut (Vigna subterranea L.) improvement as a newly introduced legume in Malaysia. It has become a “miracle lucrative” legume for Asia and Africa because of its drought resilience, excellent nutritional profiles, and versatile uses. This crop’s progress has been limited owing to a lack of extensive research, marginalization, inadequate knowledge, and a lack of accessible funds, among other concerns. The expansion of this crop is reliant on the assessment and selection of unique and reliable breeding lines in various circumstances. Consequently, the goal of this work is to determine genetic diversity and the relationship between yield-contributing components in 44 Bambara groundnut accessions sourced from the Genebank of Institute of Tropical Agriculture and Food Security (ITAFoS) at Universiti Putra Malaysia (UPM). Three replications were used in the experiment, which was done using a randomized complete block design (RCBD). The data were subjected to ANOVA, PCA, correlation, and heat map cluster analysis; also, genetic parameters and broad-sense heritability estimation were carried out on recorded phenotypic descriptors. All of the investigated variables had a significant variance (p≤0.05 or 0.01) according to the ANOVA results. Yield per hectare showed a positively strong to perfect significant correlation (0.75≤r≤1.00; p≤0.01) with the yield components viz. fresh pod weight, hundred seed weight, dry pod weight, and dry seed weight. Interestingly, these traits had heritability≥60% and genetic gain≥20%, which can be beneficial for direct selection to this crop improvement. The UPGMA clustering revealed five distinct clusters in which genotypes under cluster I, cluster II, and cluster IV produce a greater yield of 5.96%, 7.12%, and 15.05%, respectively, than the grand mean yield of 1927.01 kg/ha. The PCA biplot estimated that PC1 (32.9%) and PC2 (12.9%) would cover 45.8% of the total variance. We discovered 30 promising lines that provide yields per hectare more than 1.8 ton/ha and might be used as parental lines in future breeding operations aimed at improving the grain yield in tropical areas or comparable agroecological zones.</abstract><cop>United States</cop><pub>Hindawi</pub><pmid>35528153</pmid><doi>10.1155/2022/6794475</doi><tpages>23</tpages><orcidid>https://orcid.org/0000-0001-8195-3783</orcidid><orcidid>https://orcid.org/0000-0002-2092-971X</orcidid><orcidid>https://orcid.org/0000-0003-4763-6367</orcidid><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; PubMed Central Open Access; Wiley Online Library (Open Access Collection); PubMed Central; Alma/SFX Local Collection |
subjects | Agricultural production Agricultural research Bambara groundnut Beans Biological diversity Biomedical research Breeding Cluster analysis Clustering Crop improvement Crop yield Crop yields Crops Cultivars Drought Fabaceae - genetics Food Food security Genetic analysis Genetic aspects Genetic diversity Genetic research Genetic Variation - genetics Genotype Genotypes Groundnuts Heritability Hunger Inheritances Legumes Malaysia Mimosaceae Plant Breeding Production processes R&D Research & development Research parks Security Seeds Tropical crops Variance Variance analysis Vigna - genetics Vigna subterranea Weight |
title | Unveiling Genetic Diversity, Characterization, and Selection of Bambara Groundnut (Vigna subterranea L. Verdc) Genotypes Reflecting Yield and Yield Components in Tropical Malaysia |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-29T06%3A18%3A09IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Unveiling%20Genetic%20Diversity,%20Characterization,%20and%20Selection%20of%20Bambara%20Groundnut%20(Vigna%20subterranea%20L.%20Verdc)%20Genotypes%20Reflecting%20Yield%20and%20Yield%20Components%20in%20Tropical%20Malaysia&rft.jtitle=BioMed%20research%20international&rft.au=Khan,%20Md%20Mahmudul%20Hasan&rft.date=2022-04-26&rft.volume=2022&rft.spage=6794475&rft.epage=23&rft.pages=6794475-23&rft.issn=2314-6133&rft.eissn=2314-6141&rft_id=info:doi/10.1155/2022/6794475&rft_dat=%3Cgale_pubme%3EA702936327%3C/gale_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2660754160&rft_id=info:pmid/35528153&rft_galeid=A702936327&rfr_iscdi=true |