Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs

PIWI-interacting RNAs (piRNAs), which are germ cell-specific small RNAs, are essential for spermatogenesis. In fetal mouse germ cells, piRNAs are synthesized from sense and antisense RNAs of transposable element sequences for retrotransposon silencing. In a previous study, we reported that transgeni...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:RNA (Cambridge) 2022-05, Vol.28 (5), p.683-696
Hauptverfasser: Lee, SePil, Kuramochi-Miyagawa, Satomi, Nagamori, Ippei, Nakano, Toru
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 696
container_issue 5
container_start_page 683
container_title RNA (Cambridge)
container_volume 28
creator Lee, SePil
Kuramochi-Miyagawa, Satomi
Nagamori, Ippei
Nakano, Toru
description PIWI-interacting RNAs (piRNAs), which are germ cell-specific small RNAs, are essential for spermatogenesis. In fetal mouse germ cells, piRNAs are synthesized from sense and antisense RNAs of transposable element sequences for retrotransposon silencing. In a previous study, we reported that transgenic mice expressing antisense under the control of the promoter (Tg- as ) exhibited piRNA-mediated DNMT3L down-regulation. In this study, two transgene integration loci (B3 and E1) were identified on chromosome 18 of the Tg- as mice; these loci were weak piRNA clusters. Crossbreeding was performed to obtain mice with the transgene cassette inserted into a single locus. DNMT3L was silenced and spermatogenesis was severely impaired in mice with the transgene cassette inserted at the B3 locus (Tg-B mice). In contrast, spermatogenesis in mice bearing the transgene at the E1 locus (Tg-E mice) was normal. The number of piRNAs for in Tg-B mice was eightfold higher than that in Tg-E mice. Therefore, both gene silencing and impaired spermatogenesis depended on the transgene copy number rather than on the insertion loci. Additionally, the endogenous promoter was not methylated in Tg mice, suggesting that silencing was caused by post-transcriptional gene silencing. Based on these data, we discuss a piRNA-dependent gene silencing mechanism against novel gene insertions.
doi_str_mv 10.1261/rna.078905.121
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_9014882</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2659697271</sourcerecordid><originalsourceid>FETCH-LOGICAL-c414t-da744b134a60d58865fc5cfbd78e2a95a836145b86cb5fb91c100defba44952b3</originalsourceid><addsrcrecordid>eNpdkU-PFCEQxTtG466rV4-GxIuXHqGBbriYbHZXnWSixmg8EqCLGTbdMAK9yX4BP7eMs65_TlBVv_dSldc0zwleka4nr1PQKzwIiXmtyYPmlLBethJj8rD-KeetoKI7aZ7kfF2btI4fNyeUE8YxxqfNjyvnwJaMokMl6ZC3EAD5kCEVHwOaovVIhxHZuL9FYZkNJFT7l2EudIN-0dlPEKwPW1R2KS7bXRUUn6Ga_PFsR0j-Bkb0af1t3fpQIGlbDqLPH87z0-aR01OGZ3fvWfP17dWXi_ft5uO79cX5prWMsNKOemDMEMp0j0cuRM-d5daZcRDQacm1oH29zIjeGu6MJJZgPIIzmjHJO0PPmjdH3_1iZhgthLrgpPbJzzrdqqi9-ncS_E5t442SmDAhumrw6s4gxe8L5KJmny1Mkw4Ql6y6vhMUEyx5RV_-h17HpeY1HSguezl0A6nU6kjZFHNO4O6XIVgdIlZVoo4R1_ogePH3Cff470zpTy7XpLw</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2659697271</pqid></control><display><type>article</type><title>Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs</title><source>MEDLINE</source><source>Open Access Journals</source><source>PubMed Central</source><source>Alma/SFX Local Collection</source><creator>Lee, SePil ; Kuramochi-Miyagawa, Satomi ; Nagamori, Ippei ; Nakano, Toru</creator><creatorcontrib>Lee, SePil ; Kuramochi-Miyagawa, Satomi ; Nagamori, Ippei ; Nakano, Toru</creatorcontrib><description>PIWI-interacting RNAs (piRNAs), which are germ cell-specific small RNAs, are essential for spermatogenesis. In fetal mouse germ cells, piRNAs are synthesized from sense and antisense RNAs of transposable element sequences for retrotransposon silencing. In a previous study, we reported that transgenic mice expressing antisense under the control of the promoter (Tg- as ) exhibited piRNA-mediated DNMT3L down-regulation. In this study, two transgene integration loci (B3 and E1) were identified on chromosome 18 of the Tg- as mice; these loci were weak piRNA clusters. Crossbreeding was performed to obtain mice with the transgene cassette inserted into a single locus. DNMT3L was silenced and spermatogenesis was severely impaired in mice with the transgene cassette inserted at the B3 locus (Tg-B mice). In contrast, spermatogenesis in mice bearing the transgene at the E1 locus (Tg-E mice) was normal. The number of piRNAs for in Tg-B mice was eightfold higher than that in Tg-E mice. Therefore, both gene silencing and impaired spermatogenesis depended on the transgene copy number rather than on the insertion loci. Additionally, the endogenous promoter was not methylated in Tg mice, suggesting that silencing was caused by post-transcriptional gene silencing. Based on these data, we discuss a piRNA-dependent gene silencing mechanism against novel gene insertions.</description><identifier>ISSN: 1355-8382</identifier><identifier>EISSN: 1469-9001</identifier><identifier>DOI: 10.1261/rna.078905.121</identifier><identifier>PMID: 35145000</identifier><language>eng</language><publisher>United States: Cold Spring Harbor Laboratory Press</publisher><subject>Animals ; Antisense RNA ; Argonaute Proteins - genetics ; Chromosome 18 ; Copy number ; Cross-breeding ; DNA (Cytosine-5-)-Methyltransferases - genetics ; DNA Copy Number Variations ; Fetuses ; Gene Silencing ; Germ cells ; Male ; Mice ; Post-transcription ; RNA, Small Interfering - genetics ; Spermatogenesis ; Spermatogenesis - genetics ; Transcription Factors - genetics ; Transgenes ; Transgenic mice</subject><ispartof>RNA (Cambridge), 2022-05, Vol.28 (5), p.683-696</ispartof><rights>2022 Lee et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society.</rights><rights>Copyright Cold Spring Harbor Laboratory Press May 2022</rights><rights>2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c414t-da744b134a60d58865fc5cfbd78e2a95a836145b86cb5fb91c100defba44952b3</citedby><cites>FETCH-LOGICAL-c414t-da744b134a60d58865fc5cfbd78e2a95a836145b86cb5fb91c100defba44952b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9014882/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9014882/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27903,27904,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35145000$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, SePil</creatorcontrib><creatorcontrib>Kuramochi-Miyagawa, Satomi</creatorcontrib><creatorcontrib>Nagamori, Ippei</creatorcontrib><creatorcontrib>Nakano, Toru</creatorcontrib><title>Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs</title><title>RNA (Cambridge)</title><addtitle>RNA</addtitle><description>PIWI-interacting RNAs (piRNAs), which are germ cell-specific small RNAs, are essential for spermatogenesis. In fetal mouse germ cells, piRNAs are synthesized from sense and antisense RNAs of transposable element sequences for retrotransposon silencing. In a previous study, we reported that transgenic mice expressing antisense under the control of the promoter (Tg- as ) exhibited piRNA-mediated DNMT3L down-regulation. In this study, two transgene integration loci (B3 and E1) were identified on chromosome 18 of the Tg- as mice; these loci were weak piRNA clusters. Crossbreeding was performed to obtain mice with the transgene cassette inserted into a single locus. DNMT3L was silenced and spermatogenesis was severely impaired in mice with the transgene cassette inserted at the B3 locus (Tg-B mice). In contrast, spermatogenesis in mice bearing the transgene at the E1 locus (Tg-E mice) was normal. The number of piRNAs for in Tg-B mice was eightfold higher than that in Tg-E mice. Therefore, both gene silencing and impaired spermatogenesis depended on the transgene copy number rather than on the insertion loci. Additionally, the endogenous promoter was not methylated in Tg mice, suggesting that silencing was caused by post-transcriptional gene silencing. Based on these data, we discuss a piRNA-dependent gene silencing mechanism against novel gene insertions.</description><subject>Animals</subject><subject>Antisense RNA</subject><subject>Argonaute Proteins - genetics</subject><subject>Chromosome 18</subject><subject>Copy number</subject><subject>Cross-breeding</subject><subject>DNA (Cytosine-5-)-Methyltransferases - genetics</subject><subject>DNA Copy Number Variations</subject><subject>Fetuses</subject><subject>Gene Silencing</subject><subject>Germ cells</subject><subject>Male</subject><subject>Mice</subject><subject>Post-transcription</subject><subject>RNA, Small Interfering - genetics</subject><subject>Spermatogenesis</subject><subject>Spermatogenesis - genetics</subject><subject>Transcription Factors - genetics</subject><subject>Transgenes</subject><subject>Transgenic mice</subject><issn>1355-8382</issn><issn>1469-9001</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkU-PFCEQxTtG466rV4-GxIuXHqGBbriYbHZXnWSixmg8EqCLGTbdMAK9yX4BP7eMs65_TlBVv_dSldc0zwleka4nr1PQKzwIiXmtyYPmlLBethJj8rD-KeetoKI7aZ7kfF2btI4fNyeUE8YxxqfNjyvnwJaMokMl6ZC3EAD5kCEVHwOaovVIhxHZuL9FYZkNJFT7l2EudIN-0dlPEKwPW1R2KS7bXRUUn6Ga_PFsR0j-Bkb0af1t3fpQIGlbDqLPH87z0-aR01OGZ3fvWfP17dWXi_ft5uO79cX5prWMsNKOemDMEMp0j0cuRM-d5daZcRDQacm1oH29zIjeGu6MJJZgPIIzmjHJO0PPmjdH3_1iZhgthLrgpPbJzzrdqqi9-ncS_E5t442SmDAhumrw6s4gxe8L5KJmny1Mkw4Ql6y6vhMUEyx5RV_-h17HpeY1HSguezl0A6nU6kjZFHNO4O6XIVgdIlZVoo4R1_ogePH3Cff470zpTy7XpLw</recordid><startdate>20220501</startdate><enddate>20220501</enddate><creator>Lee, SePil</creator><creator>Kuramochi-Miyagawa, Satomi</creator><creator>Nagamori, Ippei</creator><creator>Nakano, Toru</creator><general>Cold Spring Harbor Laboratory Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20220501</creationdate><title>Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs</title><author>Lee, SePil ; Kuramochi-Miyagawa, Satomi ; Nagamori, Ippei ; Nakano, Toru</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c414t-da744b134a60d58865fc5cfbd78e2a95a836145b86cb5fb91c100defba44952b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Animals</topic><topic>Antisense RNA</topic><topic>Argonaute Proteins - genetics</topic><topic>Chromosome 18</topic><topic>Copy number</topic><topic>Cross-breeding</topic><topic>DNA (Cytosine-5-)-Methyltransferases - genetics</topic><topic>DNA Copy Number Variations</topic><topic>Fetuses</topic><topic>Gene Silencing</topic><topic>Germ cells</topic><topic>Male</topic><topic>Mice</topic><topic>Post-transcription</topic><topic>RNA, Small Interfering - genetics</topic><topic>Spermatogenesis</topic><topic>Spermatogenesis - genetics</topic><topic>Transcription Factors - genetics</topic><topic>Transgenes</topic><topic>Transgenic mice</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, SePil</creatorcontrib><creatorcontrib>Kuramochi-Miyagawa, Satomi</creatorcontrib><creatorcontrib>Nagamori, Ippei</creatorcontrib><creatorcontrib>Nakano, Toru</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>RNA (Cambridge)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, SePil</au><au>Kuramochi-Miyagawa, Satomi</au><au>Nagamori, Ippei</au><au>Nakano, Toru</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs</atitle><jtitle>RNA (Cambridge)</jtitle><addtitle>RNA</addtitle><date>2022-05-01</date><risdate>2022</risdate><volume>28</volume><issue>5</issue><spage>683</spage><epage>696</epage><pages>683-696</pages><issn>1355-8382</issn><eissn>1469-9001</eissn><abstract>PIWI-interacting RNAs (piRNAs), which are germ cell-specific small RNAs, are essential for spermatogenesis. In fetal mouse germ cells, piRNAs are synthesized from sense and antisense RNAs of transposable element sequences for retrotransposon silencing. In a previous study, we reported that transgenic mice expressing antisense under the control of the promoter (Tg- as ) exhibited piRNA-mediated DNMT3L down-regulation. In this study, two transgene integration loci (B3 and E1) were identified on chromosome 18 of the Tg- as mice; these loci were weak piRNA clusters. Crossbreeding was performed to obtain mice with the transgene cassette inserted into a single locus. DNMT3L was silenced and spermatogenesis was severely impaired in mice with the transgene cassette inserted at the B3 locus (Tg-B mice). In contrast, spermatogenesis in mice bearing the transgene at the E1 locus (Tg-E mice) was normal. The number of piRNAs for in Tg-B mice was eightfold higher than that in Tg-E mice. Therefore, both gene silencing and impaired spermatogenesis depended on the transgene copy number rather than on the insertion loci. Additionally, the endogenous promoter was not methylated in Tg mice, suggesting that silencing was caused by post-transcriptional gene silencing. Based on these data, we discuss a piRNA-dependent gene silencing mechanism against novel gene insertions.</abstract><cop>United States</cop><pub>Cold Spring Harbor Laboratory Press</pub><pmid>35145000</pmid><doi>10.1261/rna.078905.121</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1355-8382
ispartof RNA (Cambridge), 2022-05, Vol.28 (5), p.683-696
issn 1355-8382
1469-9001
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_9014882
source MEDLINE; Open Access Journals; PubMed Central; Alma/SFX Local Collection
subjects Animals
Antisense RNA
Argonaute Proteins - genetics
Chromosome 18
Copy number
Cross-breeding
DNA (Cytosine-5-)-Methyltransferases - genetics
DNA Copy Number Variations
Fetuses
Gene Silencing
Germ cells
Male
Mice
Post-transcription
RNA, Small Interfering - genetics
Spermatogenesis
Spermatogenesis - genetics
Transcription Factors - genetics
Transgenes
Transgenic mice
title Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-24T20%3A02%3A49IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Effects%20of%20transgene%20insertion%20loci%20and%20copy%20number%20on%20Dnmt3L%20gene%20silencing%20through%20antisense%20transgene-derived%20PIWI-interacting%20RNAs&rft.jtitle=RNA%20(Cambridge)&rft.au=Lee,%20SePil&rft.date=2022-05-01&rft.volume=28&rft.issue=5&rft.spage=683&rft.epage=696&rft.pages=683-696&rft.issn=1355-8382&rft.eissn=1469-9001&rft_id=info:doi/10.1261/rna.078905.121&rft_dat=%3Cproquest_pubme%3E2659697271%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2659697271&rft_id=info:pmid/35145000&rfr_iscdi=true