Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs
PIWI-interacting RNAs (piRNAs), which are germ cell-specific small RNAs, are essential for spermatogenesis. In fetal mouse germ cells, piRNAs are synthesized from sense and antisense RNAs of transposable element sequences for retrotransposon silencing. In a previous study, we reported that transgeni...
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description | PIWI-interacting RNAs (piRNAs), which are germ cell-specific small RNAs, are essential for spermatogenesis. In fetal mouse germ cells, piRNAs are synthesized from sense and antisense RNAs of transposable element sequences for retrotransposon silencing. In a previous study, we reported that transgenic mice expressing antisense
under the control of the
promoter (Tg-
as
) exhibited piRNA-mediated DNMT3L down-regulation. In this study, two transgene integration loci (B3 and E1) were identified on chromosome 18 of the Tg-
as
mice; these loci were weak piRNA clusters. Crossbreeding was performed to obtain mice with the transgene cassette inserted into a single locus. DNMT3L was silenced and spermatogenesis was severely impaired in mice with the transgene cassette inserted at the B3 locus (Tg-B mice). In contrast, spermatogenesis in mice bearing the transgene at the E1 locus (Tg-E mice) was normal. The number of piRNAs for
in Tg-B mice was eightfold higher than that in Tg-E mice. Therefore, both gene silencing and impaired spermatogenesis depended on the transgene copy number rather than on the insertion loci. Additionally, the endogenous
promoter was not methylated in Tg mice, suggesting that
silencing was caused by post-transcriptional gene silencing. Based on these data, we discuss a piRNA-dependent gene silencing mechanism against novel gene insertions. |
doi_str_mv | 10.1261/rna.078905.121 |
format | Article |
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under the control of the
promoter (Tg-
as
) exhibited piRNA-mediated DNMT3L down-regulation. In this study, two transgene integration loci (B3 and E1) were identified on chromosome 18 of the Tg-
as
mice; these loci were weak piRNA clusters. Crossbreeding was performed to obtain mice with the transgene cassette inserted into a single locus. DNMT3L was silenced and spermatogenesis was severely impaired in mice with the transgene cassette inserted at the B3 locus (Tg-B mice). In contrast, spermatogenesis in mice bearing the transgene at the E1 locus (Tg-E mice) was normal. The number of piRNAs for
in Tg-B mice was eightfold higher than that in Tg-E mice. Therefore, both gene silencing and impaired spermatogenesis depended on the transgene copy number rather than on the insertion loci. Additionally, the endogenous
promoter was not methylated in Tg mice, suggesting that
silencing was caused by post-transcriptional gene silencing. Based on these data, we discuss a piRNA-dependent gene silencing mechanism against novel gene insertions.</description><identifier>ISSN: 1355-8382</identifier><identifier>EISSN: 1469-9001</identifier><identifier>DOI: 10.1261/rna.078905.121</identifier><identifier>PMID: 35145000</identifier><language>eng</language><publisher>United States: Cold Spring Harbor Laboratory Press</publisher><subject>Animals ; Antisense RNA ; Argonaute Proteins - genetics ; Chromosome 18 ; Copy number ; Cross-breeding ; DNA (Cytosine-5-)-Methyltransferases - genetics ; DNA Copy Number Variations ; Fetuses ; Gene Silencing ; Germ cells ; Male ; Mice ; Post-transcription ; RNA, Small Interfering - genetics ; Spermatogenesis ; Spermatogenesis - genetics ; Transcription Factors - genetics ; Transgenes ; Transgenic mice</subject><ispartof>RNA (Cambridge), 2022-05, Vol.28 (5), p.683-696</ispartof><rights>2022 Lee et al.; Published by Cold Spring Harbor Laboratory Press for the RNA Society.</rights><rights>Copyright Cold Spring Harbor Laboratory Press May 2022</rights><rights>2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c414t-da744b134a60d58865fc5cfbd78e2a95a836145b86cb5fb91c100defba44952b3</citedby><cites>FETCH-LOGICAL-c414t-da744b134a60d58865fc5cfbd78e2a95a836145b86cb5fb91c100defba44952b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9014882/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9014882/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27903,27904,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35145000$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, SePil</creatorcontrib><creatorcontrib>Kuramochi-Miyagawa, Satomi</creatorcontrib><creatorcontrib>Nagamori, Ippei</creatorcontrib><creatorcontrib>Nakano, Toru</creatorcontrib><title>Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs</title><title>RNA (Cambridge)</title><addtitle>RNA</addtitle><description>PIWI-interacting RNAs (piRNAs), which are germ cell-specific small RNAs, are essential for spermatogenesis. In fetal mouse germ cells, piRNAs are synthesized from sense and antisense RNAs of transposable element sequences for retrotransposon silencing. In a previous study, we reported that transgenic mice expressing antisense
under the control of the
promoter (Tg-
as
) exhibited piRNA-mediated DNMT3L down-regulation. In this study, two transgene integration loci (B3 and E1) were identified on chromosome 18 of the Tg-
as
mice; these loci were weak piRNA clusters. Crossbreeding was performed to obtain mice with the transgene cassette inserted into a single locus. DNMT3L was silenced and spermatogenesis was severely impaired in mice with the transgene cassette inserted at the B3 locus (Tg-B mice). In contrast, spermatogenesis in mice bearing the transgene at the E1 locus (Tg-E mice) was normal. The number of piRNAs for
in Tg-B mice was eightfold higher than that in Tg-E mice. Therefore, both gene silencing and impaired spermatogenesis depended on the transgene copy number rather than on the insertion loci. Additionally, the endogenous
promoter was not methylated in Tg mice, suggesting that
silencing was caused by post-transcriptional gene silencing. Based on these data, we discuss a piRNA-dependent gene silencing mechanism against novel gene insertions.</description><subject>Animals</subject><subject>Antisense RNA</subject><subject>Argonaute Proteins - genetics</subject><subject>Chromosome 18</subject><subject>Copy number</subject><subject>Cross-breeding</subject><subject>DNA (Cytosine-5-)-Methyltransferases - genetics</subject><subject>DNA Copy Number Variations</subject><subject>Fetuses</subject><subject>Gene Silencing</subject><subject>Germ cells</subject><subject>Male</subject><subject>Mice</subject><subject>Post-transcription</subject><subject>RNA, Small Interfering - genetics</subject><subject>Spermatogenesis</subject><subject>Spermatogenesis - genetics</subject><subject>Transcription Factors - genetics</subject><subject>Transgenes</subject><subject>Transgenic mice</subject><issn>1355-8382</issn><issn>1469-9001</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkU-PFCEQxTtG466rV4-GxIuXHqGBbriYbHZXnWSixmg8EqCLGTbdMAK9yX4BP7eMs65_TlBVv_dSldc0zwleka4nr1PQKzwIiXmtyYPmlLBethJj8rD-KeetoKI7aZ7kfF2btI4fNyeUE8YxxqfNjyvnwJaMokMl6ZC3EAD5kCEVHwOaovVIhxHZuL9FYZkNJFT7l2EudIN-0dlPEKwPW1R2KS7bXRUUn6Ga_PFsR0j-Bkb0af1t3fpQIGlbDqLPH87z0-aR01OGZ3fvWfP17dWXi_ft5uO79cX5prWMsNKOemDMEMp0j0cuRM-d5daZcRDQacm1oH29zIjeGu6MJJZgPIIzmjHJO0PPmjdH3_1iZhgthLrgpPbJzzrdqqi9-ncS_E5t442SmDAhumrw6s4gxe8L5KJmny1Mkw4Ql6y6vhMUEyx5RV_-h17HpeY1HSguezl0A6nU6kjZFHNO4O6XIVgdIlZVoo4R1_ogePH3Cff470zpTy7XpLw</recordid><startdate>20220501</startdate><enddate>20220501</enddate><creator>Lee, SePil</creator><creator>Kuramochi-Miyagawa, Satomi</creator><creator>Nagamori, Ippei</creator><creator>Nakano, Toru</creator><general>Cold Spring Harbor Laboratory Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20220501</creationdate><title>Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs</title><author>Lee, SePil ; Kuramochi-Miyagawa, Satomi ; Nagamori, Ippei ; Nakano, Toru</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c414t-da744b134a60d58865fc5cfbd78e2a95a836145b86cb5fb91c100defba44952b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Animals</topic><topic>Antisense RNA</topic><topic>Argonaute Proteins - genetics</topic><topic>Chromosome 18</topic><topic>Copy number</topic><topic>Cross-breeding</topic><topic>DNA (Cytosine-5-)-Methyltransferases - genetics</topic><topic>DNA Copy Number Variations</topic><topic>Fetuses</topic><topic>Gene Silencing</topic><topic>Germ cells</topic><topic>Male</topic><topic>Mice</topic><topic>Post-transcription</topic><topic>RNA, Small Interfering - genetics</topic><topic>Spermatogenesis</topic><topic>Spermatogenesis - genetics</topic><topic>Transcription Factors - genetics</topic><topic>Transgenes</topic><topic>Transgenic mice</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, SePil</creatorcontrib><creatorcontrib>Kuramochi-Miyagawa, Satomi</creatorcontrib><creatorcontrib>Nagamori, Ippei</creatorcontrib><creatorcontrib>Nakano, Toru</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>RNA (Cambridge)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, SePil</au><au>Kuramochi-Miyagawa, Satomi</au><au>Nagamori, Ippei</au><au>Nakano, Toru</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs</atitle><jtitle>RNA (Cambridge)</jtitle><addtitle>RNA</addtitle><date>2022-05-01</date><risdate>2022</risdate><volume>28</volume><issue>5</issue><spage>683</spage><epage>696</epage><pages>683-696</pages><issn>1355-8382</issn><eissn>1469-9001</eissn><abstract>PIWI-interacting RNAs (piRNAs), which are germ cell-specific small RNAs, are essential for spermatogenesis. In fetal mouse germ cells, piRNAs are synthesized from sense and antisense RNAs of transposable element sequences for retrotransposon silencing. In a previous study, we reported that transgenic mice expressing antisense
under the control of the
promoter (Tg-
as
) exhibited piRNA-mediated DNMT3L down-regulation. In this study, two transgene integration loci (B3 and E1) were identified on chromosome 18 of the Tg-
as
mice; these loci were weak piRNA clusters. Crossbreeding was performed to obtain mice with the transgene cassette inserted into a single locus. DNMT3L was silenced and spermatogenesis was severely impaired in mice with the transgene cassette inserted at the B3 locus (Tg-B mice). In contrast, spermatogenesis in mice bearing the transgene at the E1 locus (Tg-E mice) was normal. The number of piRNAs for
in Tg-B mice was eightfold higher than that in Tg-E mice. Therefore, both gene silencing and impaired spermatogenesis depended on the transgene copy number rather than on the insertion loci. Additionally, the endogenous
promoter was not methylated in Tg mice, suggesting that
silencing was caused by post-transcriptional gene silencing. Based on these data, we discuss a piRNA-dependent gene silencing mechanism against novel gene insertions.</abstract><cop>United States</cop><pub>Cold Spring Harbor Laboratory Press</pub><pmid>35145000</pmid><doi>10.1261/rna.078905.121</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Antisense RNA Argonaute Proteins - genetics Chromosome 18 Copy number Cross-breeding DNA (Cytosine-5-)-Methyltransferases - genetics DNA Copy Number Variations Fetuses Gene Silencing Germ cells Male Mice Post-transcription RNA, Small Interfering - genetics Spermatogenesis Spermatogenesis - genetics Transcription Factors - genetics Transgenes Transgenic mice |
title | Effects of transgene insertion loci and copy number on Dnmt3L gene silencing through antisense transgene-derived PIWI-interacting RNAs |
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