Structural evidence of the oxidation of iodide ion into hyper‐reactive hypoiodite ion by mammalian heme lactoperoxidase
Lactoperoxidase (1.11.1.7, LPO) is a mammalian heme peroxidase found in the extracellular fluids of mammals including plasma, saliva, airway epithelial lining fluids, nasal lining fluid, milk, tears, gastric juices, and intestinal mucosa. To perform its innate immune action against invading microbes...
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Veröffentlicht in: | Protein science 2022-02, Vol.31 (2), p.384-395 |
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description | Lactoperoxidase (1.11.1.7, LPO) is a mammalian heme peroxidase found in the extracellular fluids of mammals including plasma, saliva, airway epithelial lining fluids, nasal lining fluid, milk, tears, gastric juices, and intestinal mucosa. To perform its innate immune action against invading microbes, LPO utilizes hydrogen peroxide (H2O2) to convert thiocyanate (SCN−) and iodide (I−) ions into the oxidizing compounds hypothiocyanite (OSCN−) and hypoiodite (IO−). Previously determined structures of the complexes of LPO with SCN−, OSCN−, and I− show that SCN− and I− occupy appropriate positions in the distal heme cavity as substrates while OSCN− binds in the distal heme cavity as a product inhibitor. We report here the structure of the complex of LPO with IO− as the first structural evidence of the conversion of iodide into hypoiodite by LPO. To obtain this complex, a solution of LPO was first incubated with H2O2, then mixed with ammonium iodide solution and the complex crystallized by the addition of PEG‐3350, 20% (wt/vol). These crystals were used for X‐ray intensity data collection and structure analysis. The structure determination revealed the presence of four hypoiodite ions in the substrate binding channel of LPO. In addition to these, six other hypoiodite ions were observed at different exterior sites. We surmise that the presence of hypoiodite ions in the distal heme cavity blocks the substrate binding site and inhibits catalysis. This was confirmed by activity experiments with the colorimetric substrate, ABTS (2,2′‐azino‐bis(3‐ethylbenzthiazoline‐sulfonic acid)), in the presence of hypoiodite and iodide ions.
PDB Code(s): 7VE3; |
doi_str_mv | 10.1002/pro.4230 |
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PDB Code(s): 7VE3;</description><identifier>ISSN: 0961-8368</identifier><identifier>EISSN: 1469-896X</identifier><identifier>DOI: 10.1002/pro.4230</identifier><identifier>PMID: 34761444</identifier><language>eng</language><publisher>Hoboken, USA: John Wiley & Sons, Inc</publisher><subject>Ammonium ; Animals ; Binding sites ; Catalysis ; Colorimetry ; Crystal structure ; Crystallization ; Crystallography, X-Ray ; Crystals ; Data collection ; Full‐Length Paper ; Full‐Length Papers ; Gastric juice ; Heme ; Heme - chemistry ; Hydrogen peroxide ; Hydrogen Peroxide - chemistry ; inhibition mechanism ; innate immunity ; Iodides ; Iodine Compounds ; Ions ; lactoperoxidase ; Lactoperoxidase - chemistry ; Lactoperoxidase - metabolism ; Mammals ; Mucosa ; mucosal immunology ; Oxidation ; Oxidation-Reduction ; Peroxidase ; Saliva ; Structural analysis ; Substrate inhibition ; Substrates ; Sulfonic acid ; Thiocyanates ; viral immunology</subject><ispartof>Protein science, 2022-02, Vol.31 (2), p.384-395</ispartof><rights>2021 The Protein Society.</rights><rights>2022 The Protein Society</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4380-4190522e187da8b00597bae1a7a401fb16fce36cbfb82959f2e2f2069f9cb2b3</citedby><cites>FETCH-LOGICAL-c4380-4190522e187da8b00597bae1a7a401fb16fce36cbfb82959f2e2f2069f9cb2b3</cites><orcidid>0000-0001-9873-7323 ; 0000-0001-6627-0669 ; 0000-0002-2886-7963</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819834/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8819834/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,1417,1433,27924,27925,45574,45575,46409,46833,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34761444$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Singh, Prashant K.</creatorcontrib><creatorcontrib>Ahmad, Nayeem</creatorcontrib><creatorcontrib>Yamini, Shavait</creatorcontrib><creatorcontrib>Singh, Rashmi P.</creatorcontrib><creatorcontrib>Singh, Amit K.</creatorcontrib><creatorcontrib>Sharma, Pradeep</creatorcontrib><creatorcontrib>Smith, Michael L.</creatorcontrib><creatorcontrib>Sharma, Sujata</creatorcontrib><creatorcontrib>Singh, Tej P.</creatorcontrib><title>Structural evidence of the oxidation of iodide ion into hyper‐reactive hypoiodite ion by mammalian heme lactoperoxidase</title><title>Protein science</title><addtitle>Protein Sci</addtitle><description>Lactoperoxidase (1.11.1.7, LPO) is a mammalian heme peroxidase found in the extracellular fluids of mammals including plasma, saliva, airway epithelial lining fluids, nasal lining fluid, milk, tears, gastric juices, and intestinal mucosa. To perform its innate immune action against invading microbes, LPO utilizes hydrogen peroxide (H2O2) to convert thiocyanate (SCN−) and iodide (I−) ions into the oxidizing compounds hypothiocyanite (OSCN−) and hypoiodite (IO−). Previously determined structures of the complexes of LPO with SCN−, OSCN−, and I− show that SCN− and I− occupy appropriate positions in the distal heme cavity as substrates while OSCN− binds in the distal heme cavity as a product inhibitor. We report here the structure of the complex of LPO with IO− as the first structural evidence of the conversion of iodide into hypoiodite by LPO. To obtain this complex, a solution of LPO was first incubated with H2O2, then mixed with ammonium iodide solution and the complex crystallized by the addition of PEG‐3350, 20% (wt/vol). These crystals were used for X‐ray intensity data collection and structure analysis. The structure determination revealed the presence of four hypoiodite ions in the substrate binding channel of LPO. In addition to these, six other hypoiodite ions were observed at different exterior sites. We surmise that the presence of hypoiodite ions in the distal heme cavity blocks the substrate binding site and inhibits catalysis. This was confirmed by activity experiments with the colorimetric substrate, ABTS (2,2′‐azino‐bis(3‐ethylbenzthiazoline‐sulfonic acid)), in the presence of hypoiodite and iodide ions.
PDB Code(s): 7VE3;</description><subject>Ammonium</subject><subject>Animals</subject><subject>Binding sites</subject><subject>Catalysis</subject><subject>Colorimetry</subject><subject>Crystal structure</subject><subject>Crystallization</subject><subject>Crystallography, X-Ray</subject><subject>Crystals</subject><subject>Data collection</subject><subject>Full‐Length Paper</subject><subject>Full‐Length Papers</subject><subject>Gastric juice</subject><subject>Heme</subject><subject>Heme - chemistry</subject><subject>Hydrogen peroxide</subject><subject>Hydrogen Peroxide - chemistry</subject><subject>inhibition mechanism</subject><subject>innate immunity</subject><subject>Iodides</subject><subject>Iodine Compounds</subject><subject>Ions</subject><subject>lactoperoxidase</subject><subject>Lactoperoxidase - chemistry</subject><subject>Lactoperoxidase - metabolism</subject><subject>Mammals</subject><subject>Mucosa</subject><subject>mucosal immunology</subject><subject>Oxidation</subject><subject>Oxidation-Reduction</subject><subject>Peroxidase</subject><subject>Saliva</subject><subject>Structural analysis</subject><subject>Substrate inhibition</subject><subject>Substrates</subject><subject>Sulfonic acid</subject><subject>Thiocyanates</subject><subject>viral immunology</subject><issn>0961-8368</issn><issn>1469-896X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kc1O3DAQgC1UBFtaqU-AIvXCJWA7Xse-IFWI_khIoJZDb5btjLtGSbw4ztLceASesU9ShwVEDz2NZubzN2MNQh8IPiYY05N1DMeMVngHLQjjshSS_3yDFlhyUoqKi330dhhuMMaM0GoP7Ves5oQxtkDTjxRHm8ao2wI2voHeQhFckVY5_PaNTj70c8GHJneLOfN9CsVqWkP8c_8QQdvkNzAXwgylLWSmotNdp1uv-2IFHRRtBkN-9Kgd4B3adbod4P1TPEDXn8-vz76WF5dfvp19uigtqwQuGZF4SSkQUTdaGIyXsjYaiK41w8QZwp2FilvjjKByKR0F6ijm0klrqKkO0OlWux5NB42FPuW_qnX0nY6TCtqrfzu9X6lfYaOEIFJULAs-PgliuB1hSOomjLHPKyvK6VJKUuOZOtpSNoZhiOBeJhCs5hvlPKj5Rhk9fL3RC_h8lAyUW-DOtzD9V6Suvl8-Cv8CA0efvw</recordid><startdate>202202</startdate><enddate>202202</enddate><creator>Singh, Prashant K.</creator><creator>Ahmad, Nayeem</creator><creator>Yamini, Shavait</creator><creator>Singh, Rashmi P.</creator><creator>Singh, Amit K.</creator><creator>Sharma, Pradeep</creator><creator>Smith, Michael L.</creator><creator>Sharma, Sujata</creator><creator>Singh, Tej P.</creator><general>John Wiley & Sons, Inc</general><general>Wiley Subscription Services, Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7T5</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-9873-7323</orcidid><orcidid>https://orcid.org/0000-0001-6627-0669</orcidid><orcidid>https://orcid.org/0000-0002-2886-7963</orcidid></search><sort><creationdate>202202</creationdate><title>Structural evidence of the oxidation of iodide ion into hyper‐reactive hypoiodite ion by mammalian heme lactoperoxidase</title><author>Singh, Prashant K. ; Ahmad, Nayeem ; Yamini, Shavait ; Singh, Rashmi P. ; Singh, Amit K. ; Sharma, Pradeep ; Smith, Michael L. ; Sharma, Sujata ; Singh, Tej P.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4380-4190522e187da8b00597bae1a7a401fb16fce36cbfb82959f2e2f2069f9cb2b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Ammonium</topic><topic>Animals</topic><topic>Binding sites</topic><topic>Catalysis</topic><topic>Colorimetry</topic><topic>Crystal structure</topic><topic>Crystallization</topic><topic>Crystallography, X-Ray</topic><topic>Crystals</topic><topic>Data collection</topic><topic>Full‐Length Paper</topic><topic>Full‐Length Papers</topic><topic>Gastric juice</topic><topic>Heme</topic><topic>Heme - chemistry</topic><topic>Hydrogen peroxide</topic><topic>Hydrogen Peroxide - chemistry</topic><topic>inhibition mechanism</topic><topic>innate immunity</topic><topic>Iodides</topic><topic>Iodine Compounds</topic><topic>Ions</topic><topic>lactoperoxidase</topic><topic>Lactoperoxidase - chemistry</topic><topic>Lactoperoxidase - metabolism</topic><topic>Mammals</topic><topic>Mucosa</topic><topic>mucosal immunology</topic><topic>Oxidation</topic><topic>Oxidation-Reduction</topic><topic>Peroxidase</topic><topic>Saliva</topic><topic>Structural analysis</topic><topic>Substrate inhibition</topic><topic>Substrates</topic><topic>Sulfonic acid</topic><topic>Thiocyanates</topic><topic>viral immunology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Singh, Prashant K.</creatorcontrib><creatorcontrib>Ahmad, Nayeem</creatorcontrib><creatorcontrib>Yamini, Shavait</creatorcontrib><creatorcontrib>Singh, Rashmi P.</creatorcontrib><creatorcontrib>Singh, Amit K.</creatorcontrib><creatorcontrib>Sharma, Pradeep</creatorcontrib><creatorcontrib>Smith, Michael L.</creatorcontrib><creatorcontrib>Sharma, Sujata</creatorcontrib><creatorcontrib>Singh, Tej P.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Immunology Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Protein science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Singh, Prashant K.</au><au>Ahmad, Nayeem</au><au>Yamini, Shavait</au><au>Singh, Rashmi P.</au><au>Singh, Amit K.</au><au>Sharma, Pradeep</au><au>Smith, Michael L.</au><au>Sharma, Sujata</au><au>Singh, Tej P.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structural evidence of the oxidation of iodide ion into hyper‐reactive hypoiodite ion by mammalian heme lactoperoxidase</atitle><jtitle>Protein science</jtitle><addtitle>Protein Sci</addtitle><date>2022-02</date><risdate>2022</risdate><volume>31</volume><issue>2</issue><spage>384</spage><epage>395</epage><pages>384-395</pages><issn>0961-8368</issn><eissn>1469-896X</eissn><abstract>Lactoperoxidase (1.11.1.7, LPO) is a mammalian heme peroxidase found in the extracellular fluids of mammals including plasma, saliva, airway epithelial lining fluids, nasal lining fluid, milk, tears, gastric juices, and intestinal mucosa. To perform its innate immune action against invading microbes, LPO utilizes hydrogen peroxide (H2O2) to convert thiocyanate (SCN−) and iodide (I−) ions into the oxidizing compounds hypothiocyanite (OSCN−) and hypoiodite (IO−). Previously determined structures of the complexes of LPO with SCN−, OSCN−, and I− show that SCN− and I− occupy appropriate positions in the distal heme cavity as substrates while OSCN− binds in the distal heme cavity as a product inhibitor. We report here the structure of the complex of LPO with IO− as the first structural evidence of the conversion of iodide into hypoiodite by LPO. To obtain this complex, a solution of LPO was first incubated with H2O2, then mixed with ammonium iodide solution and the complex crystallized by the addition of PEG‐3350, 20% (wt/vol). These crystals were used for X‐ray intensity data collection and structure analysis. The structure determination revealed the presence of four hypoiodite ions in the substrate binding channel of LPO. In addition to these, six other hypoiodite ions were observed at different exterior sites. We surmise that the presence of hypoiodite ions in the distal heme cavity blocks the substrate binding site and inhibits catalysis. This was confirmed by activity experiments with the colorimetric substrate, ABTS (2,2′‐azino‐bis(3‐ethylbenzthiazoline‐sulfonic acid)), in the presence of hypoiodite and iodide ions.
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subjects | Ammonium Animals Binding sites Catalysis Colorimetry Crystal structure Crystallization Crystallography, X-Ray Crystals Data collection Full‐Length Paper Full‐Length Papers Gastric juice Heme Heme - chemistry Hydrogen peroxide Hydrogen Peroxide - chemistry inhibition mechanism innate immunity Iodides Iodine Compounds Ions lactoperoxidase Lactoperoxidase - chemistry Lactoperoxidase - metabolism Mammals Mucosa mucosal immunology Oxidation Oxidation-Reduction Peroxidase Saliva Structural analysis Substrate inhibition Substrates Sulfonic acid Thiocyanates viral immunology |
title | Structural evidence of the oxidation of iodide ion into hyper‐reactive hypoiodite ion by mammalian heme lactoperoxidase |
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