Isolation and molecular characterization of Clostridium difficile strains from patients and the hospital environment in Belarus
Toxigenic Clostridium difficile is the most common etiologic agent of hospital-acquired diarrhea in developed countries. The role of this pathogen in nosocomial diarrhea in Eastern Europe has not been clearly established. The goal of this study was to determine the prevalence of C. difficile in pati...
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description | Toxigenic Clostridium difficile is the most common etiologic agent of hospital-acquired diarrhea in developed countries. The role of this pathogen in nosocomial diarrhea in Eastern Europe has not been clearly established. The goal of this study was to determine the prevalence of C. difficile in patients and the hospital environment in Belarus and to characterize these isolates as to the presence of toxin genes and their molecular type. C. difficile was isolated from 9 of 509 (1.8%) patients analyzed and recovered from 28 of 1,300 (2. 1%) environmental sites cultured. A multiplex PCR assay was used to analyze the pathogenicity locus (PaLoc) of all isolates, and strain identity was determined by an arbitrarily primed PCR (AP-PCR). The targeted sequences for all the genes in the PaLoc were amplified in all C. difficile strains examined. A predominantly homogeneous group of strains was found among these isolates, with five major AP-PCR groups being identified. Eighty-three percent of environmental isolates were classified into two groups, while patient isolates grouped into three AP-PCR types, two of which were also found in the hospital environment. Although no data on the role of C. difficile infection or epidemiology of C. difficile-associated diarrhea (CDAD) in this country exist, the isolation of toxigenic C. difficile from the hospital environment suggests that this pathogen may be responsible for cases of diarrhea of undiagnosed origin and validates our effort to further investigate the significance of CDAD in Eastern Europe. |
doi_str_mv | 10.1128/jcm.38.3.1200-1202.2000 |
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J ; COHEN, S. H ; SILVA, J. JR</creator><creatorcontrib>TITOV, L ; LEBEDKOVA, N ; SHABANOV, A ; TANG, Y. J ; COHEN, S. H ; SILVA, J. JR</creatorcontrib><description>Toxigenic Clostridium difficile is the most common etiologic agent of hospital-acquired diarrhea in developed countries. The role of this pathogen in nosocomial diarrhea in Eastern Europe has not been clearly established. The goal of this study was to determine the prevalence of C. difficile in patients and the hospital environment in Belarus and to characterize these isolates as to the presence of toxin genes and their molecular type. C. difficile was isolated from 9 of 509 (1.8%) patients analyzed and recovered from 28 of 1,300 (2. 1%) environmental sites cultured. A multiplex PCR assay was used to analyze the pathogenicity locus (PaLoc) of all isolates, and strain identity was determined by an arbitrarily primed PCR (AP-PCR). The targeted sequences for all the genes in the PaLoc were amplified in all C. difficile strains examined. A predominantly homogeneous group of strains was found among these isolates, with five major AP-PCR groups being identified. Eighty-three percent of environmental isolates were classified into two groups, while patient isolates grouped into three AP-PCR types, two of which were also found in the hospital environment. Although no data on the role of C. difficile infection or epidemiology of C. difficile-associated diarrhea (CDAD) in this country exist, the isolation of toxigenic C. difficile from the hospital environment suggests that this pathogen may be responsible for cases of diarrhea of undiagnosed origin and validates our effort to further investigate the significance of CDAD in Eastern Europe.</description><identifier>ISSN: 0095-1137</identifier><identifier>EISSN: 1098-660X</identifier><identifier>DOI: 10.1128/jcm.38.3.1200-1202.2000</identifier><identifier>PMID: 10699022</identifier><identifier>CODEN: JCMIDW</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Adolescent ; Adult ; Aged ; Bacterial diseases ; Bacterial diseases of the digestive system and abdomen ; Bacterial Toxins - genetics ; Bacteriology ; Belarus ; Biological and medical sciences ; Child ; Child, Preschool ; Clostridium difficile ; Clostridium difficile - classification ; Clostridium difficile - genetics ; Clostridium difficile - isolation & purification ; Community-Acquired Infections - epidemiology ; Community-Acquired Infections - microbiology ; Cross Infection - epidemiology ; Cross Infection - microbiology ; Diarrhea - epidemiology ; Diarrhea - microbiology ; DNA Primers ; Enterocolitis, Pseudomembranous - diagnosis ; Enterocolitis, Pseudomembranous - epidemiology ; Enterocolitis, Pseudomembranous - transmission ; Epidemiology ; Fundamental and applied biological sciences. Psychology ; Human bacterial diseases ; Humans ; Infant ; Infectious diseases ; Medical sciences ; Microbiology ; Middle Aged ; Nucleic Acid Amplification Techniques ; Polymerase Chain Reaction - methods ; Prevalence ; Republic of Belarus - epidemiology</subject><ispartof>Journal of clinical microbiology, 2000-03, Vol.38 (3), p.1200-1202</ispartof><rights>2000 INIST-CNRS</rights><rights>Copyright © 2000, American Society for Microbiology 2000</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c471t-94e300f6c41b603b421e6cc8ce5c89e79e3fbf44e2e8a332760e92a1529de9df3</citedby><cites>FETCH-LOGICAL-c471t-94e300f6c41b603b421e6cc8ce5c89e79e3fbf44e2e8a332760e92a1529de9df3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC86376/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC86376/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,3188,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=1352597$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10699022$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>TITOV, L</creatorcontrib><creatorcontrib>LEBEDKOVA, N</creatorcontrib><creatorcontrib>SHABANOV, A</creatorcontrib><creatorcontrib>TANG, Y. J</creatorcontrib><creatorcontrib>COHEN, S. H</creatorcontrib><creatorcontrib>SILVA, J. JR</creatorcontrib><title>Isolation and molecular characterization of Clostridium difficile strains from patients and the hospital environment in Belarus</title><title>Journal of clinical microbiology</title><addtitle>J Clin Microbiol</addtitle><description>Toxigenic Clostridium difficile is the most common etiologic agent of hospital-acquired diarrhea in developed countries. The role of this pathogen in nosocomial diarrhea in Eastern Europe has not been clearly established. The goal of this study was to determine the prevalence of C. difficile in patients and the hospital environment in Belarus and to characterize these isolates as to the presence of toxin genes and their molecular type. C. difficile was isolated from 9 of 509 (1.8%) patients analyzed and recovered from 28 of 1,300 (2. 1%) environmental sites cultured. A multiplex PCR assay was used to analyze the pathogenicity locus (PaLoc) of all isolates, and strain identity was determined by an arbitrarily primed PCR (AP-PCR). The targeted sequences for all the genes in the PaLoc were amplified in all C. difficile strains examined. A predominantly homogeneous group of strains was found among these isolates, with five major AP-PCR groups being identified. Eighty-three percent of environmental isolates were classified into two groups, while patient isolates grouped into three AP-PCR types, two of which were also found in the hospital environment. Although no data on the role of C. difficile infection or epidemiology of C. difficile-associated diarrhea (CDAD) in this country exist, the isolation of toxigenic C. difficile from the hospital environment suggests that this pathogen may be responsible for cases of diarrhea of undiagnosed origin and validates our effort to further investigate the significance of CDAD in Eastern Europe.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Bacterial diseases</subject><subject>Bacterial diseases of the digestive system and abdomen</subject><subject>Bacterial Toxins - genetics</subject><subject>Bacteriology</subject><subject>Belarus</subject><subject>Biological and medical sciences</subject><subject>Child</subject><subject>Child, Preschool</subject><subject>Clostridium difficile</subject><subject>Clostridium difficile - classification</subject><subject>Clostridium difficile - genetics</subject><subject>Clostridium difficile - isolation & purification</subject><subject>Community-Acquired Infections - epidemiology</subject><subject>Community-Acquired Infections - microbiology</subject><subject>Cross Infection - epidemiology</subject><subject>Cross Infection - microbiology</subject><subject>Diarrhea - epidemiology</subject><subject>Diarrhea - microbiology</subject><subject>DNA Primers</subject><subject>Enterocolitis, Pseudomembranous - diagnosis</subject><subject>Enterocolitis, Pseudomembranous - epidemiology</subject><subject>Enterocolitis, Pseudomembranous - transmission</subject><subject>Epidemiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Human bacterial diseases</subject><subject>Humans</subject><subject>Infant</subject><subject>Infectious diseases</subject><subject>Medical sciences</subject><subject>Microbiology</subject><subject>Middle Aged</subject><subject>Nucleic Acid Amplification Techniques</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Prevalence</subject><subject>Republic of Belarus - epidemiology</subject><issn>0095-1137</issn><issn>1098-660X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkU9v1DAQxS0EotvCVwAfELcE_4sTS1zoCkpREReQuFleZ8y6cuzFTirBha-Ow66gXMbWvN-bGekh9JySllI2vLq1U8uHlreUEdLUwtr6IQ_QhhI1NFKSrw_RhhDVNZTy_gydl3JLCBWi6x6jM0qkUoSxDfp1XVIws08RmzjiKQWwSzAZ273Jxs6Q_c-jnBzehlTm7Ee_THj0znnrA-DaMj4W7HKa8KHCEOfyZ9q8B7xP5eBnEzDEO59TnKqKfcSXULcs5Ql65Ewo8PT0XqAv795-3r5vbj5dXW_f3DRW9HRulABOiJNW0J0kfCcYBWntYKGzg4JeAXc7JwQwGAznrJcEFDO0Y2oENTp-gV4f5x6W3QSjrVdkE_Qh-8nkHzoZr_9Xot_rb-lOD5L3stpfnuw5fV-gzHryxUIIJkJaiqa9UEIMK9gfQZtTKRnc3xWU6DU6_WH7UfNBc71Gtxam1-iq89n9C-_5jllV4MUJMMWa4LKJ1pd_HO9Yp3r-G_ekp0s</recordid><startdate>20000301</startdate><enddate>20000301</enddate><creator>TITOV, L</creator><creator>LEBEDKOVA, N</creator><creator>SHABANOV, A</creator><creator>TANG, Y. J</creator><creator>COHEN, S. H</creator><creator>SILVA, J. JR</creator><general>American Society for Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>5PM</scope></search><sort><creationdate>20000301</creationdate><title>Isolation and molecular characterization of Clostridium difficile strains from patients and the hospital environment in Belarus</title><author>TITOV, L ; LEBEDKOVA, N ; SHABANOV, A ; TANG, Y. J ; COHEN, S. H ; SILVA, J. JR</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c471t-94e300f6c41b603b421e6cc8ce5c89e79e3fbf44e2e8a332760e92a1529de9df3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Bacterial diseases</topic><topic>Bacterial diseases of the digestive system and abdomen</topic><topic>Bacterial Toxins - genetics</topic><topic>Bacteriology</topic><topic>Belarus</topic><topic>Biological and medical sciences</topic><topic>Child</topic><topic>Child, Preschool</topic><topic>Clostridium difficile</topic><topic>Clostridium difficile - classification</topic><topic>Clostridium difficile - genetics</topic><topic>Clostridium difficile - isolation & purification</topic><topic>Community-Acquired Infections - epidemiology</topic><topic>Community-Acquired Infections - microbiology</topic><topic>Cross Infection - epidemiology</topic><topic>Cross Infection - microbiology</topic><topic>Diarrhea - epidemiology</topic><topic>Diarrhea - microbiology</topic><topic>DNA Primers</topic><topic>Enterocolitis, Pseudomembranous - diagnosis</topic><topic>Enterocolitis, Pseudomembranous - epidemiology</topic><topic>Enterocolitis, Pseudomembranous - transmission</topic><topic>Epidemiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Human bacterial diseases</topic><topic>Humans</topic><topic>Infant</topic><topic>Infectious diseases</topic><topic>Medical sciences</topic><topic>Microbiology</topic><topic>Middle Aged</topic><topic>Nucleic Acid Amplification Techniques</topic><topic>Polymerase Chain Reaction - methods</topic><topic>Prevalence</topic><topic>Republic of Belarus - epidemiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>TITOV, L</creatorcontrib><creatorcontrib>LEBEDKOVA, N</creatorcontrib><creatorcontrib>SHABANOV, A</creatorcontrib><creatorcontrib>TANG, Y. J</creatorcontrib><creatorcontrib>COHEN, S. H</creatorcontrib><creatorcontrib>SILVA, J. JR</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of clinical microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>TITOV, L</au><au>LEBEDKOVA, N</au><au>SHABANOV, A</au><au>TANG, Y. J</au><au>COHEN, S. H</au><au>SILVA, J. JR</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Isolation and molecular characterization of Clostridium difficile strains from patients and the hospital environment in Belarus</atitle><jtitle>Journal of clinical microbiology</jtitle><addtitle>J Clin Microbiol</addtitle><date>2000-03-01</date><risdate>2000</risdate><volume>38</volume><issue>3</issue><spage>1200</spage><epage>1202</epage><pages>1200-1202</pages><issn>0095-1137</issn><eissn>1098-660X</eissn><coden>JCMIDW</coden><abstract>Toxigenic Clostridium difficile is the most common etiologic agent of hospital-acquired diarrhea in developed countries. The role of this pathogen in nosocomial diarrhea in Eastern Europe has not been clearly established. The goal of this study was to determine the prevalence of C. difficile in patients and the hospital environment in Belarus and to characterize these isolates as to the presence of toxin genes and their molecular type. C. difficile was isolated from 9 of 509 (1.8%) patients analyzed and recovered from 28 of 1,300 (2. 1%) environmental sites cultured. A multiplex PCR assay was used to analyze the pathogenicity locus (PaLoc) of all isolates, and strain identity was determined by an arbitrarily primed PCR (AP-PCR). The targeted sequences for all the genes in the PaLoc were amplified in all C. difficile strains examined. A predominantly homogeneous group of strains was found among these isolates, with five major AP-PCR groups being identified. Eighty-three percent of environmental isolates were classified into two groups, while patient isolates grouped into three AP-PCR types, two of which were also found in the hospital environment. Although no data on the role of C. difficile infection or epidemiology of C. difficile-associated diarrhea (CDAD) in this country exist, the isolation of toxigenic C. difficile from the hospital environment suggests that this pathogen may be responsible for cases of diarrhea of undiagnosed origin and validates our effort to further investigate the significance of CDAD in Eastern Europe.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>10699022</pmid><doi>10.1128/jcm.38.3.1200-1202.2000</doi><tpages>3</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adolescent Adult Aged Bacterial diseases Bacterial diseases of the digestive system and abdomen Bacterial Toxins - genetics Bacteriology Belarus Biological and medical sciences Child Child, Preschool Clostridium difficile Clostridium difficile - classification Clostridium difficile - genetics Clostridium difficile - isolation & purification Community-Acquired Infections - epidemiology Community-Acquired Infections - microbiology Cross Infection - epidemiology Cross Infection - microbiology Diarrhea - epidemiology Diarrhea - microbiology DNA Primers Enterocolitis, Pseudomembranous - diagnosis Enterocolitis, Pseudomembranous - epidemiology Enterocolitis, Pseudomembranous - transmission Epidemiology Fundamental and applied biological sciences. Psychology Human bacterial diseases Humans Infant Infectious diseases Medical sciences Microbiology Middle Aged Nucleic Acid Amplification Techniques Polymerase Chain Reaction - methods Prevalence Republic of Belarus - epidemiology |
title | Isolation and molecular characterization of Clostridium difficile strains from patients and the hospital environment in Belarus |
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