Helicobacter pylori virulence dupA gene: risk factor or protective factor?
Helicobacter pylori is the etiological agent of chronic gastritis, peptic ulcer, and gastric cancer. The duodenal ulcer-promoting gene dupA , which is located in the plasticity region of the H. pylori genome, is homologous to the virB gene which encodes a type IV secretion protein in Agrobacterium t...
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container_title | Brazilian journal of microbiology |
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creator | de Lima Silva, Lucas Luiz Oliveira, Ana Karoline Silva Gama, Aline Rodrigues Ramos, Amanda Ferreira Paes Landim Silva, Antonio Márcio Teodoro Cordeiro Blanco, Angel José Vieira Vieira, José Daniel Gonçalves Rasmussem, Lucas Trevizani Carneiro, Lilian Carla Barbosa, Mônica Santiago |
description | Helicobacter pylori
is the etiological agent of chronic gastritis, peptic ulcer, and gastric cancer. The duodenal ulcer-promoting gene
dupA
, which is located in the plasticity region of the
H. pylori
genome, is homologous to the
virB
gene which encodes a type IV secretion protein in
Agrobacterium tumefaciens
. Studies have shown associations between
H. pylori dupA-
positive strains and gastroduodenal diseases. However, whether
dupA
acts as a risk factor or protective factor in these diseases remains unclear. Therefore, in this study, we aimed to verify the presence of the
dupA
gene in infectious
H. pylori
strains in the Brazilian mid-west and to investigate its association with the clinical outcomes of patients with dyspepsia. Additionally, the phylogenetic origin of the strains was determined. Gastric biopsies from 117 patients with dyspepsia were analyzed using histological and molecular techniques. The
hpx
gene (16S rRNA) was used to screen for
H. pylori
infection, and positive samples were then subjected to
dupA
gene detection and sequencing. The estimated prevalence of
H. pylori
infection was 64.1%, with the
dupA
gene being detected in a high proportion of infectious strains (70.7%). Furthermore, a risk analysis revealed that for women, a
dupA
-positive
H. pylori
infection increased the chance of developing gastritis by twofold. The partial
dupA
sequences from isolated infectious strains in this work are similar to those of strains isolated in westerns countries. This study provides useful insights for understanding the role of the
H. pylori dupA
gene in disease development. |
doi_str_mv | 10.1007/s42770-021-00553-9 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8578514</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2595589833</sourcerecordid><originalsourceid>FETCH-LOGICAL-c474t-a8ec8530dca4aefc223ed4d4e6f9ddac71001a280ee2a12eaca1713c1195a0893</originalsourceid><addsrcrecordid>eNp9kc1O3DAUhS1EVejQF2CBIrFhk_b6b-x0UYRQWxAjdVPWlse5GQyZOLWTkXgbnoUnq2GGn7JAsmTr3s_n-vgQsk_hCwVQX5NgSkEJjJYAUvKy2iK7dKp0KQTI7XyWVJWaa7ZDPqV0DcAkCPaR7HDBMg96l1ycYetdmFs3YCz62zZEf3-38nFssXNY1GN_Uiyww29F9OmmaDIYYpFXH8OAbvAr3BSP98iHxrYJP2_2Cbn8-ePP6Vk5-_3r_PRkVjqhxFBajU7n6bWzwmLjGONYi1rgtKnq2jqVzVHLNCAySxlaZ6mi3FFaSQu64hPyfa3bj_Ml1g67IdrW9NEvbbw1wXrzf6fzV2YRVkZLpSUVWeBoIxDD3xHTYJY-OWxb22EYk8mfQxkFWkFGD9-g12GMXbaXqUpKXWnOM8XWlIshpYjN82MomIeszDork7Myj1mZBxsHr208X3kKJwN8DaTc6hYYX2a_I_sPWJehVg</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2595589833</pqid></control><display><type>article</type><title>Helicobacter pylori virulence dupA gene: risk factor or protective factor?</title><source>MEDLINE</source><source>SpringerLink Journals</source><source>PubMed Central</source><source>Alma/SFX Local Collection</source><creator>de Lima Silva, Lucas Luiz ; Oliveira, Ana Karoline Silva ; Gama, Aline Rodrigues ; Ramos, Amanda Ferreira Paes Landim ; Silva, Antonio Márcio Teodoro Cordeiro ; Blanco, Angel José Vieira ; Vieira, José Daniel Gonçalves ; Rasmussem, Lucas Trevizani ; Carneiro, Lilian Carla ; Barbosa, Mônica Santiago</creator><creatorcontrib>de Lima Silva, Lucas Luiz ; Oliveira, Ana Karoline Silva ; Gama, Aline Rodrigues ; Ramos, Amanda Ferreira Paes Landim ; Silva, Antonio Márcio Teodoro Cordeiro ; Blanco, Angel José Vieira ; Vieira, José Daniel Gonçalves ; Rasmussem, Lucas Trevizani ; Carneiro, Lilian Carla ; Barbosa, Mônica Santiago</creatorcontrib><description>Helicobacter pylori
is the etiological agent of chronic gastritis, peptic ulcer, and gastric cancer. The duodenal ulcer-promoting gene
dupA
, which is located in the plasticity region of the
H. pylori
genome, is homologous to the
virB
gene which encodes a type IV secretion protein in
Agrobacterium tumefaciens
. Studies have shown associations between
H. pylori dupA-
positive strains and gastroduodenal diseases. However, whether
dupA
acts as a risk factor or protective factor in these diseases remains unclear. Therefore, in this study, we aimed to verify the presence of the
dupA
gene in infectious
H. pylori
strains in the Brazilian mid-west and to investigate its association with the clinical outcomes of patients with dyspepsia. Additionally, the phylogenetic origin of the strains was determined. Gastric biopsies from 117 patients with dyspepsia were analyzed using histological and molecular techniques. The
hpx
gene (16S rRNA) was used to screen for
H. pylori
infection, and positive samples were then subjected to
dupA
gene detection and sequencing. The estimated prevalence of
H. pylori
infection was 64.1%, with the
dupA
gene being detected in a high proportion of infectious strains (70.7%). Furthermore, a risk analysis revealed that for women, a
dupA
-positive
H. pylori
infection increased the chance of developing gastritis by twofold. The partial
dupA
sequences from isolated infectious strains in this work are similar to those of strains isolated in westerns countries. This study provides useful insights for understanding the role of the
H. pylori dupA
gene in disease development.</description><identifier>ISSN: 1517-8382</identifier><identifier>EISSN: 1678-4405</identifier><identifier>DOI: 10.1007/s42770-021-00553-9</identifier><identifier>PMID: 34255308</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Bacterial Proteins - genetics ; Biomedical and Life Sciences ; Biopsy ; Brazil - epidemiology ; Clinical Microbiology - Research Paper ; Dyspepsia ; Dyspepsia - complications ; Dyspepsia - epidemiology ; Dyspepsia - microbiology ; Etiology ; Female ; Food Microbiology ; Gastric cancer ; Gastritis ; Gastrointestinal diseases ; Gene sequencing ; Genomes ; Helicobacter Infections - complications ; Helicobacter Infections - epidemiology ; Helicobacter Infections - microbiology ; Helicobacter pylori ; Helicobacter pylori - classification ; Helicobacter pylori - genetics ; Helicobacter pylori - pathogenicity ; Homology ; Humans ; Infections ; Life Sciences ; Male ; Medical Microbiology ; Microbial Ecology ; Microbial Genetics and Genomics ; Microbiology ; Mycology ; Patients ; Peptic ulcers ; Phylogeny ; Protective Factors ; Risk analysis ; Risk Factors ; RNA, Ribosomal, 16S - genetics ; rRNA 16S ; Ulcers ; VirB gene ; Virulence ; Virulence Factors - genetics</subject><ispartof>Brazilian journal of microbiology, 2021-12, Vol.52 (4), p.1921-1927</ispartof><rights>Sociedade Brasileira de Microbiologia 2021</rights><rights>2021. Sociedade Brasileira de Microbiologia.</rights><rights>Sociedade Brasileira de Microbiologia 2021.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c474t-a8ec8530dca4aefc223ed4d4e6f9ddac71001a280ee2a12eaca1713c1195a0893</citedby><cites>FETCH-LOGICAL-c474t-a8ec8530dca4aefc223ed4d4e6f9ddac71001a280ee2a12eaca1713c1195a0893</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8578514/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8578514/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,724,777,781,882,27905,27906,41469,42538,51300,53772,53774</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34255308$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>de Lima Silva, Lucas Luiz</creatorcontrib><creatorcontrib>Oliveira, Ana Karoline Silva</creatorcontrib><creatorcontrib>Gama, Aline Rodrigues</creatorcontrib><creatorcontrib>Ramos, Amanda Ferreira Paes Landim</creatorcontrib><creatorcontrib>Silva, Antonio Márcio Teodoro Cordeiro</creatorcontrib><creatorcontrib>Blanco, Angel José Vieira</creatorcontrib><creatorcontrib>Vieira, José Daniel Gonçalves</creatorcontrib><creatorcontrib>Rasmussem, Lucas Trevizani</creatorcontrib><creatorcontrib>Carneiro, Lilian Carla</creatorcontrib><creatorcontrib>Barbosa, Mônica Santiago</creatorcontrib><title>Helicobacter pylori virulence dupA gene: risk factor or protective factor?</title><title>Brazilian journal of microbiology</title><addtitle>Braz J Microbiol</addtitle><addtitle>Braz J Microbiol</addtitle><description>Helicobacter pylori
is the etiological agent of chronic gastritis, peptic ulcer, and gastric cancer. The duodenal ulcer-promoting gene
dupA
, which is located in the plasticity region of the
H. pylori
genome, is homologous to the
virB
gene which encodes a type IV secretion protein in
Agrobacterium tumefaciens
. Studies have shown associations between
H. pylori dupA-
positive strains and gastroduodenal diseases. However, whether
dupA
acts as a risk factor or protective factor in these diseases remains unclear. Therefore, in this study, we aimed to verify the presence of the
dupA
gene in infectious
H. pylori
strains in the Brazilian mid-west and to investigate its association with the clinical outcomes of patients with dyspepsia. Additionally, the phylogenetic origin of the strains was determined. Gastric biopsies from 117 patients with dyspepsia were analyzed using histological and molecular techniques. The
hpx
gene (16S rRNA) was used to screen for
H. pylori
infection, and positive samples were then subjected to
dupA
gene detection and sequencing. The estimated prevalence of
H. pylori
infection was 64.1%, with the
dupA
gene being detected in a high proportion of infectious strains (70.7%). Furthermore, a risk analysis revealed that for women, a
dupA
-positive
H. pylori
infection increased the chance of developing gastritis by twofold. The partial
dupA
sequences from isolated infectious strains in this work are similar to those of strains isolated in westerns countries. This study provides useful insights for understanding the role of the
H. pylori dupA
gene in disease development.</description><subject>Bacterial Proteins - genetics</subject><subject>Biomedical and Life Sciences</subject><subject>Biopsy</subject><subject>Brazil - epidemiology</subject><subject>Clinical Microbiology - Research Paper</subject><subject>Dyspepsia</subject><subject>Dyspepsia - complications</subject><subject>Dyspepsia - epidemiology</subject><subject>Dyspepsia - microbiology</subject><subject>Etiology</subject><subject>Female</subject><subject>Food Microbiology</subject><subject>Gastric cancer</subject><subject>Gastritis</subject><subject>Gastrointestinal diseases</subject><subject>Gene sequencing</subject><subject>Genomes</subject><subject>Helicobacter Infections - complications</subject><subject>Helicobacter Infections - epidemiology</subject><subject>Helicobacter Infections - microbiology</subject><subject>Helicobacter pylori</subject><subject>Helicobacter pylori - classification</subject><subject>Helicobacter pylori - genetics</subject><subject>Helicobacter pylori - pathogenicity</subject><subject>Homology</subject><subject>Humans</subject><subject>Infections</subject><subject>Life Sciences</subject><subject>Male</subject><subject>Medical Microbiology</subject><subject>Microbial Ecology</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Mycology</subject><subject>Patients</subject><subject>Peptic ulcers</subject><subject>Phylogeny</subject><subject>Protective Factors</subject><subject>Risk analysis</subject><subject>Risk Factors</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>rRNA 16S</subject><subject>Ulcers</subject><subject>VirB gene</subject><subject>Virulence</subject><subject>Virulence Factors - genetics</subject><issn>1517-8382</issn><issn>1678-4405</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kc1O3DAUhS1EVejQF2CBIrFhk_b6b-x0UYRQWxAjdVPWlse5GQyZOLWTkXgbnoUnq2GGn7JAsmTr3s_n-vgQsk_hCwVQX5NgSkEJjJYAUvKy2iK7dKp0KQTI7XyWVJWaa7ZDPqV0DcAkCPaR7HDBMg96l1ycYetdmFs3YCz62zZEf3-38nFssXNY1GN_Uiyww29F9OmmaDIYYpFXH8OAbvAr3BSP98iHxrYJP2_2Cbn8-ePP6Vk5-_3r_PRkVjqhxFBajU7n6bWzwmLjGONYi1rgtKnq2jqVzVHLNCAySxlaZ6mi3FFaSQu64hPyfa3bj_Ml1g67IdrW9NEvbbw1wXrzf6fzV2YRVkZLpSUVWeBoIxDD3xHTYJY-OWxb22EYk8mfQxkFWkFGD9-g12GMXbaXqUpKXWnOM8XWlIshpYjN82MomIeszDork7Myj1mZBxsHr208X3kKJwN8DaTc6hYYX2a_I_sPWJehVg</recordid><startdate>20211201</startdate><enddate>20211201</enddate><creator>de Lima Silva, Lucas Luiz</creator><creator>Oliveira, Ana Karoline Silva</creator><creator>Gama, Aline Rodrigues</creator><creator>Ramos, Amanda Ferreira Paes Landim</creator><creator>Silva, Antonio Márcio Teodoro Cordeiro</creator><creator>Blanco, Angel José Vieira</creator><creator>Vieira, José Daniel Gonçalves</creator><creator>Rasmussem, Lucas Trevizani</creator><creator>Carneiro, Lilian Carla</creator><creator>Barbosa, Mônica Santiago</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7U9</scope><scope>C1K</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20211201</creationdate><title>Helicobacter pylori virulence dupA gene: risk factor or protective factor?</title><author>de Lima Silva, Lucas Luiz ; Oliveira, Ana Karoline Silva ; Gama, Aline Rodrigues ; Ramos, Amanda Ferreira Paes Landim ; Silva, Antonio Márcio Teodoro Cordeiro ; Blanco, Angel José Vieira ; Vieira, José Daniel Gonçalves ; Rasmussem, Lucas Trevizani ; Carneiro, Lilian Carla ; Barbosa, Mônica Santiago</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c474t-a8ec8530dca4aefc223ed4d4e6f9ddac71001a280ee2a12eaca1713c1195a0893</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Bacterial Proteins - genetics</topic><topic>Biomedical and Life Sciences</topic><topic>Biopsy</topic><topic>Brazil - epidemiology</topic><topic>Clinical Microbiology - Research Paper</topic><topic>Dyspepsia</topic><topic>Dyspepsia - complications</topic><topic>Dyspepsia - epidemiology</topic><topic>Dyspepsia - microbiology</topic><topic>Etiology</topic><topic>Female</topic><topic>Food Microbiology</topic><topic>Gastric cancer</topic><topic>Gastritis</topic><topic>Gastrointestinal diseases</topic><topic>Gene sequencing</topic><topic>Genomes</topic><topic>Helicobacter Infections - complications</topic><topic>Helicobacter Infections - epidemiology</topic><topic>Helicobacter Infections - microbiology</topic><topic>Helicobacter pylori</topic><topic>Helicobacter pylori - classification</topic><topic>Helicobacter pylori - genetics</topic><topic>Helicobacter pylori - pathogenicity</topic><topic>Homology</topic><topic>Humans</topic><topic>Infections</topic><topic>Life Sciences</topic><topic>Male</topic><topic>Medical Microbiology</topic><topic>Microbial Ecology</topic><topic>Microbial Genetics and Genomics</topic><topic>Microbiology</topic><topic>Mycology</topic><topic>Patients</topic><topic>Peptic ulcers</topic><topic>Phylogeny</topic><topic>Protective Factors</topic><topic>Risk analysis</topic><topic>Risk Factors</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>rRNA 16S</topic><topic>Ulcers</topic><topic>VirB gene</topic><topic>Virulence</topic><topic>Virulence Factors - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>de Lima Silva, Lucas Luiz</creatorcontrib><creatorcontrib>Oliveira, Ana Karoline Silva</creatorcontrib><creatorcontrib>Gama, Aline Rodrigues</creatorcontrib><creatorcontrib>Ramos, Amanda Ferreira Paes Landim</creatorcontrib><creatorcontrib>Silva, Antonio Márcio Teodoro Cordeiro</creatorcontrib><creatorcontrib>Blanco, Angel José Vieira</creatorcontrib><creatorcontrib>Vieira, José Daniel Gonçalves</creatorcontrib><creatorcontrib>Rasmussem, Lucas Trevizani</creatorcontrib><creatorcontrib>Carneiro, Lilian Carla</creatorcontrib><creatorcontrib>Barbosa, Mônica Santiago</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Brazilian journal of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>de Lima Silva, Lucas Luiz</au><au>Oliveira, Ana Karoline Silva</au><au>Gama, Aline Rodrigues</au><au>Ramos, Amanda Ferreira Paes Landim</au><au>Silva, Antonio Márcio Teodoro Cordeiro</au><au>Blanco, Angel José Vieira</au><au>Vieira, José Daniel Gonçalves</au><au>Rasmussem, Lucas Trevizani</au><au>Carneiro, Lilian Carla</au><au>Barbosa, Mônica Santiago</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Helicobacter pylori virulence dupA gene: risk factor or protective factor?</atitle><jtitle>Brazilian journal of microbiology</jtitle><stitle>Braz J Microbiol</stitle><addtitle>Braz J Microbiol</addtitle><date>2021-12-01</date><risdate>2021</risdate><volume>52</volume><issue>4</issue><spage>1921</spage><epage>1927</epage><pages>1921-1927</pages><issn>1517-8382</issn><eissn>1678-4405</eissn><abstract>Helicobacter pylori
is the etiological agent of chronic gastritis, peptic ulcer, and gastric cancer. The duodenal ulcer-promoting gene
dupA
, which is located in the plasticity region of the
H. pylori
genome, is homologous to the
virB
gene which encodes a type IV secretion protein in
Agrobacterium tumefaciens
. Studies have shown associations between
H. pylori dupA-
positive strains and gastroduodenal diseases. However, whether
dupA
acts as a risk factor or protective factor in these diseases remains unclear. Therefore, in this study, we aimed to verify the presence of the
dupA
gene in infectious
H. pylori
strains in the Brazilian mid-west and to investigate its association with the clinical outcomes of patients with dyspepsia. Additionally, the phylogenetic origin of the strains was determined. Gastric biopsies from 117 patients with dyspepsia were analyzed using histological and molecular techniques. The
hpx
gene (16S rRNA) was used to screen for
H. pylori
infection, and positive samples were then subjected to
dupA
gene detection and sequencing. The estimated prevalence of
H. pylori
infection was 64.1%, with the
dupA
gene being detected in a high proportion of infectious strains (70.7%). Furthermore, a risk analysis revealed that for women, a
dupA
-positive
H. pylori
infection increased the chance of developing gastritis by twofold. The partial
dupA
sequences from isolated infectious strains in this work are similar to those of strains isolated in westerns countries. This study provides useful insights for understanding the role of the
H. pylori dupA
gene in disease development.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>34255308</pmid><doi>10.1007/s42770-021-00553-9</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; SpringerLink Journals; PubMed Central; Alma/SFX Local Collection |
subjects | Bacterial Proteins - genetics Biomedical and Life Sciences Biopsy Brazil - epidemiology Clinical Microbiology - Research Paper Dyspepsia Dyspepsia - complications Dyspepsia - epidemiology Dyspepsia - microbiology Etiology Female Food Microbiology Gastric cancer Gastritis Gastrointestinal diseases Gene sequencing Genomes Helicobacter Infections - complications Helicobacter Infections - epidemiology Helicobacter Infections - microbiology Helicobacter pylori Helicobacter pylori - classification Helicobacter pylori - genetics Helicobacter pylori - pathogenicity Homology Humans Infections Life Sciences Male Medical Microbiology Microbial Ecology Microbial Genetics and Genomics Microbiology Mycology Patients Peptic ulcers Phylogeny Protective Factors Risk analysis Risk Factors RNA, Ribosomal, 16S - genetics rRNA 16S Ulcers VirB gene Virulence Virulence Factors - genetics |
title | Helicobacter pylori virulence dupA gene: risk factor or protective factor? |
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