A machine learning approach to distinguish between knees without and with osteoarthritis using MRI-based radiomic features from tibial bone
Objectives Our aim was to assess the ability of semi-automatically extracted magnetic resonance imaging (MRI)–based radiomic features from tibial subchondral bone to distinguish between knees without and with osteoarthritis. Methods The right knees of 665 females from the population-based Rotterdam...
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creator | Hirvasniemi, Jukka Klein, Stefan Bierma-Zeinstra, Sita Vernooij, Meike W. Schiphof, Dieuwke Oei, Edwin H. G. |
description | Objectives
Our aim was to assess the ability of semi-automatically extracted magnetic resonance imaging (MRI)–based radiomic features from tibial subchondral bone to distinguish between knees without and with osteoarthritis.
Methods
The right knees of 665 females from the population-based Rotterdam Study scanned with 1.5T MRI were analyzed. A fast imaging employing steady-state acquisition sequence was used for the quantitative bone analyses. Tibial bone was segmented using a method that combines multi-atlas and appearance models. Radiomic features related to the shape and texture were calculated from six volumes of interests (VOIs) in the proximal tibia. Machine learning–based Elastic Net models with 10-fold cross-validation were used to distinguish between knees without and with MRI Osteoarthritis Knee Score (MOAKS)–based tibiofemoral osteoarthritis. Performance of the covariate (age and body mass index), image features, and combined covariate + image features models were assessed using the area under the receiver operating characteristic curve (ROC AUC).
Results
Of 665 analyzed knees, 76 (11.4%) had osteoarthritis. An ROC AUC of 0.68 (95% confidence interval (CI): 0.60–0.75) was obtained using the covariate model. The image features model yielded an ROC AUC of 0.80 (CI: 0.73–0.87). The model that combined image features from all VOIs and covariates yielded an ROC AUC of 0.80 (CI: 0.73–0.87).
Conclusion
Our results suggest that radiomic features are useful imaging biomarkers of subchondral bone for the diagnosis of osteoarthritis. An advantage of assessing bone on MRI instead of on radiographs is that other tissues can be assessed simultaneously.
Key Points
• Subchondral bone plays a role in the osteoarthritis disease processes.
• MRI radiomics is a potential method for quantifying changes in subchondral bone.
• Semi-automatically extracted radiomic features of tibia differ between subjects without and with osteoarthritis. |
doi_str_mv | 10.1007/s00330-021-07951-5 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8523397</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2516841482</sourcerecordid><originalsourceid>FETCH-LOGICAL-c474t-16ffb7ebe19ff016b778f83aac3b1139388dec8fba7b6e8491eaa7f558bb91fe3</originalsourceid><addsrcrecordid>eNp9kU1vFSEUhonR2Gv1D7gwJG7coDAwF9iYNI0fTWpMjK4JzBzuUGfgCkwbf4N_Wtpb68fCFeSc5zxw8iL0lNGXjFL5qlDKOSW0Y4RK3TPS30MbJnhHGFXiPtpQzRWRWosj9KiUC0qpZkI-REecKyWEpBv04wQvdphCBDyDzTHEHbb7fU6tiGvCYyi11dZQJuygXgFE_DUCFHwV6pTWim0cb-44lQrJ5jrlUEPBa7l2ffh0RpwtMOJsx5CWMGAPtq65GXxOC67BBTtjlyI8Rg-8nQs8uT2P0Ze3bz6fvifnH9-dnZ6ck0FIUQnbeu8kOGDae8q2TkrlFbd24I4x3nZWIwzKOyvdFpTQDKyVvu-Vc5p54Mfo9cG7X90C4wCxZjubfQ6Lzd9NssH83YlhMrt0aVTfca5lE7y4FeT0bYVSzRLKAPNsI6S1mK5nWyWYUF1Dn_-DXqQ1x7Zeo1SnNG-pNKo7UENOpWTwd59h1FxnbQ5Zm5a1ucna9G3o2Z9r3I38CrcB_ACU1oo7yL_f_o_2J_hNuSQ</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2582893000</pqid></control><display><type>article</type><title>A machine learning approach to distinguish between knees without and with osteoarthritis using MRI-based radiomic features from tibial bone</title><source>MEDLINE</source><source>SpringerLink Journals - AutoHoldings</source><creator>Hirvasniemi, Jukka ; Klein, Stefan ; Bierma-Zeinstra, Sita ; Vernooij, Meike W. ; Schiphof, Dieuwke ; Oei, Edwin H. G.</creator><creatorcontrib>Hirvasniemi, Jukka ; Klein, Stefan ; Bierma-Zeinstra, Sita ; Vernooij, Meike W. ; Schiphof, Dieuwke ; Oei, Edwin H. G.</creatorcontrib><description>Objectives
Our aim was to assess the ability of semi-automatically extracted magnetic resonance imaging (MRI)–based radiomic features from tibial subchondral bone to distinguish between knees without and with osteoarthritis.
Methods
The right knees of 665 females from the population-based Rotterdam Study scanned with 1.5T MRI were analyzed. A fast imaging employing steady-state acquisition sequence was used for the quantitative bone analyses. Tibial bone was segmented using a method that combines multi-atlas and appearance models. Radiomic features related to the shape and texture were calculated from six volumes of interests (VOIs) in the proximal tibia. Machine learning–based Elastic Net models with 10-fold cross-validation were used to distinguish between knees without and with MRI Osteoarthritis Knee Score (MOAKS)–based tibiofemoral osteoarthritis. Performance of the covariate (age and body mass index), image features, and combined covariate + image features models were assessed using the area under the receiver operating characteristic curve (ROC AUC).
Results
Of 665 analyzed knees, 76 (11.4%) had osteoarthritis. An ROC AUC of 0.68 (95% confidence interval (CI): 0.60–0.75) was obtained using the covariate model. The image features model yielded an ROC AUC of 0.80 (CI: 0.73–0.87). The model that combined image features from all VOIs and covariates yielded an ROC AUC of 0.80 (CI: 0.73–0.87).
Conclusion
Our results suggest that radiomic features are useful imaging biomarkers of subchondral bone for the diagnosis of osteoarthritis. An advantage of assessing bone on MRI instead of on radiographs is that other tissues can be assessed simultaneously.
Key Points
• Subchondral bone plays a role in the osteoarthritis disease processes.
• MRI radiomics is a potential method for quantifying changes in subchondral bone.
• Semi-automatically extracted radiomic features of tibia differ between subjects without and with osteoarthritis.</description><identifier>ISSN: 0938-7994</identifier><identifier>EISSN: 1432-1084</identifier><identifier>DOI: 10.1007/s00330-021-07951-5</identifier><identifier>PMID: 33884470</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Arthritis ; Biomarkers ; Biomedical materials ; Body mass ; Body mass index ; Body size ; Bone imaging ; Confidence intervals ; Diagnostic Radiology ; Feature extraction ; Female ; Humans ; Imaging ; Internal Medicine ; Interventional Radiology ; Knee ; Knee Joint ; Learning algorithms ; Machine Learning ; Magnetic Resonance Imaging ; Medical imaging ; Medicine ; Medicine & Public Health ; Musculoskeletal ; Neuroradiology ; Osteoarthritis ; Osteoarthritis, Knee - diagnostic imaging ; Population studies ; Radiology ; Radiomics ; ROC Curve ; Subchondral bone ; Tibia ; Tibia - diagnostic imaging ; Ultrasound</subject><ispartof>European radiology, 2021-11, Vol.31 (11), p.8513-8521</ispartof><rights>The Author(s) 2021</rights><rights>2021. The Author(s).</rights><rights>The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c474t-16ffb7ebe19ff016b778f83aac3b1139388dec8fba7b6e8491eaa7f558bb91fe3</citedby><cites>FETCH-LOGICAL-c474t-16ffb7ebe19ff016b778f83aac3b1139388dec8fba7b6e8491eaa7f558bb91fe3</cites><orcidid>0000-0003-3727-3427</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00330-021-07951-5$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00330-021-07951-5$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33884470$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hirvasniemi, Jukka</creatorcontrib><creatorcontrib>Klein, Stefan</creatorcontrib><creatorcontrib>Bierma-Zeinstra, Sita</creatorcontrib><creatorcontrib>Vernooij, Meike W.</creatorcontrib><creatorcontrib>Schiphof, Dieuwke</creatorcontrib><creatorcontrib>Oei, Edwin H. G.</creatorcontrib><title>A machine learning approach to distinguish between knees without and with osteoarthritis using MRI-based radiomic features from tibial bone</title><title>European radiology</title><addtitle>Eur Radiol</addtitle><addtitle>Eur Radiol</addtitle><description>Objectives
Our aim was to assess the ability of semi-automatically extracted magnetic resonance imaging (MRI)–based radiomic features from tibial subchondral bone to distinguish between knees without and with osteoarthritis.
Methods
The right knees of 665 females from the population-based Rotterdam Study scanned with 1.5T MRI were analyzed. A fast imaging employing steady-state acquisition sequence was used for the quantitative bone analyses. Tibial bone was segmented using a method that combines multi-atlas and appearance models. Radiomic features related to the shape and texture were calculated from six volumes of interests (VOIs) in the proximal tibia. Machine learning–based Elastic Net models with 10-fold cross-validation were used to distinguish between knees without and with MRI Osteoarthritis Knee Score (MOAKS)–based tibiofemoral osteoarthritis. Performance of the covariate (age and body mass index), image features, and combined covariate + image features models were assessed using the area under the receiver operating characteristic curve (ROC AUC).
Results
Of 665 analyzed knees, 76 (11.4%) had osteoarthritis. An ROC AUC of 0.68 (95% confidence interval (CI): 0.60–0.75) was obtained using the covariate model. The image features model yielded an ROC AUC of 0.80 (CI: 0.73–0.87). The model that combined image features from all VOIs and covariates yielded an ROC AUC of 0.80 (CI: 0.73–0.87).
Conclusion
Our results suggest that radiomic features are useful imaging biomarkers of subchondral bone for the diagnosis of osteoarthritis. An advantage of assessing bone on MRI instead of on radiographs is that other tissues can be assessed simultaneously.
Key Points
• Subchondral bone plays a role in the osteoarthritis disease processes.
• MRI radiomics is a potential method for quantifying changes in subchondral bone.
• Semi-automatically extracted radiomic features of tibia differ between subjects without and with osteoarthritis.</description><subject>Arthritis</subject><subject>Biomarkers</subject><subject>Biomedical materials</subject><subject>Body mass</subject><subject>Body mass index</subject><subject>Body size</subject><subject>Bone imaging</subject><subject>Confidence intervals</subject><subject>Diagnostic Radiology</subject><subject>Feature extraction</subject><subject>Female</subject><subject>Humans</subject><subject>Imaging</subject><subject>Internal Medicine</subject><subject>Interventional Radiology</subject><subject>Knee</subject><subject>Knee Joint</subject><subject>Learning algorithms</subject><subject>Machine Learning</subject><subject>Magnetic Resonance Imaging</subject><subject>Medical imaging</subject><subject>Medicine</subject><subject>Medicine & Public Health</subject><subject>Musculoskeletal</subject><subject>Neuroradiology</subject><subject>Osteoarthritis</subject><subject>Osteoarthritis, Knee - diagnostic imaging</subject><subject>Population studies</subject><subject>Radiology</subject><subject>Radiomics</subject><subject>ROC Curve</subject><subject>Subchondral bone</subject><subject>Tibia</subject><subject>Tibia - diagnostic imaging</subject><subject>Ultrasound</subject><issn>0938-7994</issn><issn>1432-1084</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp9kU1vFSEUhonR2Gv1D7gwJG7coDAwF9iYNI0fTWpMjK4JzBzuUGfgCkwbf4N_Wtpb68fCFeSc5zxw8iL0lNGXjFL5qlDKOSW0Y4RK3TPS30MbJnhHGFXiPtpQzRWRWosj9KiUC0qpZkI-REecKyWEpBv04wQvdphCBDyDzTHEHbb7fU6tiGvCYyi11dZQJuygXgFE_DUCFHwV6pTWim0cb-44lQrJ5jrlUEPBa7l2ffh0RpwtMOJsx5CWMGAPtq65GXxOC67BBTtjlyI8Rg-8nQs8uT2P0Ze3bz6fvifnH9-dnZ6ck0FIUQnbeu8kOGDae8q2TkrlFbd24I4x3nZWIwzKOyvdFpTQDKyVvu-Vc5p54Mfo9cG7X90C4wCxZjubfQ6Lzd9NssH83YlhMrt0aVTfca5lE7y4FeT0bYVSzRLKAPNsI6S1mK5nWyWYUF1Dn_-DXqQ1x7Zeo1SnNG-pNKo7UENOpWTwd59h1FxnbQ5Zm5a1ucna9G3o2Z9r3I38CrcB_ACU1oo7yL_f_o_2J_hNuSQ</recordid><startdate>20211101</startdate><enddate>20211101</enddate><creator>Hirvasniemi, Jukka</creator><creator>Klein, Stefan</creator><creator>Bierma-Zeinstra, Sita</creator><creator>Vernooij, Meike W.</creator><creator>Schiphof, Dieuwke</creator><creator>Oei, Edwin H. G.</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QO</scope><scope>7RV</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-3727-3427</orcidid></search><sort><creationdate>20211101</creationdate><title>A machine learning approach to distinguish between knees without and with osteoarthritis using MRI-based radiomic features from tibial bone</title><author>Hirvasniemi, Jukka ; Klein, Stefan ; Bierma-Zeinstra, Sita ; Vernooij, Meike W. ; Schiphof, Dieuwke ; Oei, Edwin H. G.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c474t-16ffb7ebe19ff016b778f83aac3b1139388dec8fba7b6e8491eaa7f558bb91fe3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Arthritis</topic><topic>Biomarkers</topic><topic>Biomedical materials</topic><topic>Body mass</topic><topic>Body mass index</topic><topic>Body size</topic><topic>Bone imaging</topic><topic>Confidence intervals</topic><topic>Diagnostic Radiology</topic><topic>Feature extraction</topic><topic>Female</topic><topic>Humans</topic><topic>Imaging</topic><topic>Internal Medicine</topic><topic>Interventional Radiology</topic><topic>Knee</topic><topic>Knee Joint</topic><topic>Learning algorithms</topic><topic>Machine Learning</topic><topic>Magnetic Resonance Imaging</topic><topic>Medical imaging</topic><topic>Medicine</topic><topic>Medicine & Public Health</topic><topic>Musculoskeletal</topic><topic>Neuroradiology</topic><topic>Osteoarthritis</topic><topic>Osteoarthritis, Knee - diagnostic imaging</topic><topic>Population studies</topic><topic>Radiology</topic><topic>Radiomics</topic><topic>ROC Curve</topic><topic>Subchondral bone</topic><topic>Tibia</topic><topic>Tibia - diagnostic imaging</topic><topic>Ultrasound</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hirvasniemi, Jukka</creatorcontrib><creatorcontrib>Klein, Stefan</creatorcontrib><creatorcontrib>Bierma-Zeinstra, Sita</creatorcontrib><creatorcontrib>Vernooij, Meike W.</creatorcontrib><creatorcontrib>Schiphof, Dieuwke</creatorcontrib><creatorcontrib>Oei, Edwin H. 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G.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A machine learning approach to distinguish between knees without and with osteoarthritis using MRI-based radiomic features from tibial bone</atitle><jtitle>European radiology</jtitle><stitle>Eur Radiol</stitle><addtitle>Eur Radiol</addtitle><date>2021-11-01</date><risdate>2021</risdate><volume>31</volume><issue>11</issue><spage>8513</spage><epage>8521</epage><pages>8513-8521</pages><issn>0938-7994</issn><eissn>1432-1084</eissn><abstract>Objectives
Our aim was to assess the ability of semi-automatically extracted magnetic resonance imaging (MRI)–based radiomic features from tibial subchondral bone to distinguish between knees without and with osteoarthritis.
Methods
The right knees of 665 females from the population-based Rotterdam Study scanned with 1.5T MRI were analyzed. A fast imaging employing steady-state acquisition sequence was used for the quantitative bone analyses. Tibial bone was segmented using a method that combines multi-atlas and appearance models. Radiomic features related to the shape and texture were calculated from six volumes of interests (VOIs) in the proximal tibia. Machine learning–based Elastic Net models with 10-fold cross-validation were used to distinguish between knees without and with MRI Osteoarthritis Knee Score (MOAKS)–based tibiofemoral osteoarthritis. Performance of the covariate (age and body mass index), image features, and combined covariate + image features models were assessed using the area under the receiver operating characteristic curve (ROC AUC).
Results
Of 665 analyzed knees, 76 (11.4%) had osteoarthritis. An ROC AUC of 0.68 (95% confidence interval (CI): 0.60–0.75) was obtained using the covariate model. The image features model yielded an ROC AUC of 0.80 (CI: 0.73–0.87). The model that combined image features from all VOIs and covariates yielded an ROC AUC of 0.80 (CI: 0.73–0.87).
Conclusion
Our results suggest that radiomic features are useful imaging biomarkers of subchondral bone for the diagnosis of osteoarthritis. An advantage of assessing bone on MRI instead of on radiographs is that other tissues can be assessed simultaneously.
Key Points
• Subchondral bone plays a role in the osteoarthritis disease processes.
• MRI radiomics is a potential method for quantifying changes in subchondral bone.
• Semi-automatically extracted radiomic features of tibia differ between subjects without and with osteoarthritis.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>33884470</pmid><doi>10.1007/s00330-021-07951-5</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0003-3727-3427</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Arthritis Biomarkers Biomedical materials Body mass Body mass index Body size Bone imaging Confidence intervals Diagnostic Radiology Feature extraction Female Humans Imaging Internal Medicine Interventional Radiology Knee Knee Joint Learning algorithms Machine Learning Magnetic Resonance Imaging Medical imaging Medicine Medicine & Public Health Musculoskeletal Neuroradiology Osteoarthritis Osteoarthritis, Knee - diagnostic imaging Population studies Radiology Radiomics ROC Curve Subchondral bone Tibia Tibia - diagnostic imaging Ultrasound |
title | A machine learning approach to distinguish between knees without and with osteoarthritis using MRI-based radiomic features from tibial bone |
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