Marine dissolved organic matter: a vast and unexplored molecular space
Marine dissolved organic matter (DOM) comprises a vast and unexplored molecular space. Most of it resided in the oceans for thousands of years. It is among the most diverse molecular mixtures known, consisting of millions of individual compounds. More than 1 Eg of this material exists on the planet....
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creator | Catalá, Teresa S. Shorte, Spencer Dittmar, Thorsten |
description | Marine dissolved organic matter (DOM) comprises a vast and unexplored molecular space. Most of it resided in the oceans for thousands of years. It is among the most diverse molecular mixtures known, consisting of millions of individual compounds. More than 1 Eg of this material exists on the planet. As such, it comprises a formidable source of natural products promising significant potential for new biotechnological purposes. Great emphasis has been placed on understanding the role of DOM in biogeochemical cycles and climate attenuation, its lifespan, interaction with microorganisms, as well as its molecular composition. Yet, probing DOM bioactivities is in its infancy, largely because it is technically challenging due to the chemical complexity of the material. It is of considerable interest to develop technologies capable to better discern DOM bioactivities. Modern screening technologies are opening new avenues allowing accelerated identification of bioactivities for small molecules from natural products. These methods diminish a priori the need for laborious chemical fractionation. We examine here the application of untargeted metabolomics and multiplexed high-throughput molecular-phenotypic screening techniques that are providing first insights on previously undetectable DOM bioactivities.
Key points
•
Marine DOM is a vast, unexplored biotechnological resource.
•
Untargeted bioscreening approaches are emerging for natural product screening.
•
Perspectives for developing bioscreening platforms for marine DOM are discussed. |
doi_str_mv | 10.1007/s00253-021-11489-3 |
format | Article |
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Key points
•
Marine DOM is a vast, unexplored biotechnological resource.
•
Untargeted bioscreening approaches are emerging for natural product screening.
•
Perspectives for developing bioscreening platforms for marine DOM are discussed.</description><identifier>ISSN: 0175-7598</identifier><identifier>EISSN: 1432-0614</identifier><identifier>DOI: 10.1007/s00253-021-11489-3</identifier><identifier>PMID: 34536106</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Analysis ; Astrochemistry ; Attenuation ; Biogeochemical cycles ; Biological activity ; Biomedical and Life Sciences ; Biotechnology ; Chemical composition ; Chemical fractionation ; Dissolved organic matter ; Fractionation ; Life Sciences ; Life span ; Metabolomics ; Microbial Genetics and Genomics ; Microbiology ; Microorganisms ; Mini-Review ; Natural products ; Oceans ; Particles ; Screening ; Sea-water</subject><ispartof>Applied microbiology and biotechnology, 2021-10, Vol.105 (19), p.7225-7239</ispartof><rights>The Author(s) 2022. corrected publication 2022</rights><rights>2021. The Author(s).</rights><rights>COPYRIGHT 2021 Springer</rights><rights>The Author(s) 2022. corrected publication 2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>The Author(s) 2022, corrected publication 2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c575t-1ebdbf87e0092c8e25dd595c6f60357eedcef99fdc299fa88a310998a693394f3</citedby><cites>FETCH-LOGICAL-c575t-1ebdbf87e0092c8e25dd595c6f60357eedcef99fdc299fa88a310998a693394f3</cites><orcidid>0000-0002-1922-3277</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00253-021-11489-3$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00253-021-11489-3$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>230,314,780,784,885,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34536106$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Catalá, Teresa S.</creatorcontrib><creatorcontrib>Shorte, Spencer</creatorcontrib><creatorcontrib>Dittmar, Thorsten</creatorcontrib><title>Marine dissolved organic matter: a vast and unexplored molecular space</title><title>Applied microbiology and biotechnology</title><addtitle>Appl Microbiol Biotechnol</addtitle><addtitle>Appl Microbiol Biotechnol</addtitle><description>Marine dissolved organic matter (DOM) comprises a vast and unexplored molecular space. Most of it resided in the oceans for thousands of years. It is among the most diverse molecular mixtures known, consisting of millions of individual compounds. More than 1 Eg of this material exists on the planet. As such, it comprises a formidable source of natural products promising significant potential for new biotechnological purposes. Great emphasis has been placed on understanding the role of DOM in biogeochemical cycles and climate attenuation, its lifespan, interaction with microorganisms, as well as its molecular composition. Yet, probing DOM bioactivities is in its infancy, largely because it is technically challenging due to the chemical complexity of the material. It is of considerable interest to develop technologies capable to better discern DOM bioactivities. Modern screening technologies are opening new avenues allowing accelerated identification of bioactivities for small molecules from natural products. These methods diminish a priori the need for laborious chemical fractionation. We examine here the application of untargeted metabolomics and multiplexed high-throughput molecular-phenotypic screening techniques that are providing first insights on previously undetectable DOM bioactivities.
Key points
•
Marine DOM is a vast, unexplored biotechnological resource.
•
Untargeted bioscreening approaches are emerging for natural product screening.
•
Perspectives for developing bioscreening platforms for marine DOM are discussed.</description><subject>Analysis</subject><subject>Astrochemistry</subject><subject>Attenuation</subject><subject>Biogeochemical cycles</subject><subject>Biological activity</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Chemical composition</subject><subject>Chemical fractionation</subject><subject>Dissolved organic matter</subject><subject>Fractionation</subject><subject>Life Sciences</subject><subject>Life span</subject><subject>Metabolomics</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Mini-Review</subject><subject>Natural 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products</topic><topic>Oceans</topic><topic>Particles</topic><topic>Screening</topic><topic>Sea-water</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Catalá, Teresa S.</creatorcontrib><creatorcontrib>Shorte, Spencer</creatorcontrib><creatorcontrib>Dittmar, Thorsten</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Access via ABI/INFORM (ProQuest)</collection><collection>ABI/INFORM Global (PDF only)</collection><collection>ProQuest 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biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Catalá, Teresa S.</au><au>Shorte, Spencer</au><au>Dittmar, Thorsten</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Marine dissolved organic matter: a vast and unexplored molecular space</atitle><jtitle>Applied microbiology and biotechnology</jtitle><stitle>Appl Microbiol Biotechnol</stitle><addtitle>Appl Microbiol Biotechnol</addtitle><date>2021-10-01</date><risdate>2021</risdate><volume>105</volume><issue>19</issue><spage>7225</spage><epage>7239</epage><pages>7225-7239</pages><issn>0175-7598</issn><eissn>1432-0614</eissn><abstract>Marine dissolved organic matter (DOM) comprises a vast and unexplored molecular space. Most of it resided in the oceans for thousands of years. It is among the most diverse molecular mixtures known, consisting of millions of individual compounds. More than 1 Eg of this material exists on the planet. As such, it comprises a formidable source of natural products promising significant potential for new biotechnological purposes. Great emphasis has been placed on understanding the role of DOM in biogeochemical cycles and climate attenuation, its lifespan, interaction with microorganisms, as well as its molecular composition. Yet, probing DOM bioactivities is in its infancy, largely because it is technically challenging due to the chemical complexity of the material. It is of considerable interest to develop technologies capable to better discern DOM bioactivities. Modern screening technologies are opening new avenues allowing accelerated identification of bioactivities for small molecules from natural products. These methods diminish a priori the need for laborious chemical fractionation. We examine here the application of untargeted metabolomics and multiplexed high-throughput molecular-phenotypic screening techniques that are providing first insights on previously undetectable DOM bioactivities.
Key points
•
Marine DOM is a vast, unexplored biotechnological resource.
•
Untargeted bioscreening approaches are emerging for natural product screening.
•
Perspectives for developing bioscreening platforms for marine DOM are discussed.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>34536106</pmid><doi>10.1007/s00253-021-11489-3</doi><tpages>15</tpages><orcidid>https://orcid.org/0000-0002-1922-3277</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Analysis Astrochemistry Attenuation Biogeochemical cycles Biological activity Biomedical and Life Sciences Biotechnology Chemical composition Chemical fractionation Dissolved organic matter Fractionation Life Sciences Life span Metabolomics Microbial Genetics and Genomics Microbiology Microorganisms Mini-Review Natural products Oceans Particles Screening Sea-water |
title | Marine dissolved organic matter: a vast and unexplored molecular space |
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