Radiogenomic Analysis of Locally Advanced Lung Cancer Based on CT Imaging and Intratreatment Changes in Cell-Free DNA
The radiologic appearance of locally advanced lung cancer may be linked to molecular changes of the disease during treatment, but characteristics of this phenomenon are poorly understood. Radiomics, liquid biopsy of cell-free DNA (cfDNA), and next-generation sequencing of circulating tumor DNA (ctDN...
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creator | Lafata, Kyle J Corradetti, Michael N Gao, Junheng Jacobs, Corbin D Weng, Jingxi Chang, Yushi Wang, Chunhao Hatch, Ace Xanthopoulos, Eric Jones, Greg Kelsey, Chris R Yin, Fang-Fang |
description | The radiologic appearance of locally advanced lung cancer may be linked to molecular changes of the disease during treatment, but characteristics of this phenomenon are poorly understood. Radiomics, liquid biopsy of cell-free DNA (cfDNA), and next-generation sequencing of circulating tumor DNA (ctDNA) encode tumor-specific radiogenomic expression patterns that can be probed to study this problem. Preliminary findings are reported from a radiogenomic analysis of CT imaging, cfDNA, and ctDNA in 24 patients (median age, 64 years; range, 49-74 years) with stage III lung cancer undergoing chemoradiation on a prospective pilot study (NCT00921739) between September 2009 and September 2014. Unsupervised clustering of radiomic signatures resulted in two clusters that were associated with ctDNA
mutations (
= .03) and changes in cfDNA concentration after 2 weeks of chemoradiation (
= .02). The radiomic features dissimilarity (hazard ratio [HR] = 0.56;
= .05), joint entropy (HR = 0.56;
= .04), sum entropy (HR = 0.53;
= .02), and normalized inverse difference (HR = 1.77;
= .05) were associated with overall survival. These results suggest heterogeneous and low-attenuating disease without a detectable ctDNA
mutation was associated with early surges of cfDNA concentration in response to therapy and a generally better prognosis.
CT-Quantitative, Radiation Therapy, Lung, Computer Applications-3D, Oncology, Tumor Response, Outcomes Analysis Clinical trial registration no. NCT00921739
© RSNA, 2021. |
doi_str_mv | 10.1148/rycan.2021200157 |
format | Article |
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mutations (
= .03) and changes in cfDNA concentration after 2 weeks of chemoradiation (
= .02). The radiomic features dissimilarity (hazard ratio [HR] = 0.56;
= .05), joint entropy (HR = 0.56;
= .04), sum entropy (HR = 0.53;
= .02), and normalized inverse difference (HR = 1.77;
= .05) were associated with overall survival. These results suggest heterogeneous and low-attenuating disease without a detectable ctDNA
mutation was associated with early surges of cfDNA concentration in response to therapy and a generally better prognosis.
CT-Quantitative, Radiation Therapy, Lung, Computer Applications-3D, Oncology, Tumor Response, Outcomes Analysis Clinical trial registration no. NCT00921739
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mutations (
= .03) and changes in cfDNA concentration after 2 weeks of chemoradiation (
= .02). The radiomic features dissimilarity (hazard ratio [HR] = 0.56;
= .05), joint entropy (HR = 0.56;
= .04), sum entropy (HR = 0.53;
= .02), and normalized inverse difference (HR = 1.77;
= .05) were associated with overall survival. These results suggest heterogeneous and low-attenuating disease without a detectable ctDNA
mutation was associated with early surges of cfDNA concentration in response to therapy and a generally better prognosis.
CT-Quantitative, Radiation Therapy, Lung, Computer Applications-3D, Oncology, Tumor Response, Outcomes Analysis Clinical trial registration no. NCT00921739
© RSNA, 2021.</description><subject>Aged</subject><subject>Biomarkers, Tumor - genetics</subject><subject>Brief Report</subject><subject>Cell-Free Nucleic Acids</subject><subject>Humans</subject><subject>Lung Neoplasms - diagnostic imaging</subject><subject>Middle Aged</subject><subject>Pilot Projects</subject><subject>Prospective Studies</subject><subject>Tomography, X-Ray Computed</subject><issn>2638-616X</issn><issn>2638-616X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVUcFO3DAQtSpQQcC9p8pHLqF2nKydS6UlFLrSCiREpd6sWXsSXCU22AnS_n29QClcZkYzb9680SPkC2dnnFfqW9wa8GclK3nJGK_lJ3JYLoQqFnzxe-9dfUBOUvrDWAZKzhn_TA5ElRkaLg7JfAvWhR59GJ2hSw_DNrlEQ0fXwcAwbOnSPoE3aOl69j1td3Wk55ByJ3ja3tHVCL3LI_CWrvwUYYoI04h-ou09-B4TdRmIw1BcRkR6cb08JvsdDAlPXvMR-XX54679Waxvrlbtcl0Y0SymAgSwRnUbZQwHlKgAbQ6NEJJLxRvWWSYRAVRZbWxVYwMC0YKUtbJmU4oj8v2F92HejGgN7uQN-iG6EeJWB3D648S7e92HJ61EVYmaZ4LTV4IYHmdMkx5dMvkV8BjmpMu6YjWvq0ZmKHuBmhhSiti9neFM7wzTz4bp_4blla_v5b0t_LNH_AX0jpQo</recordid><startdate>20210701</startdate><enddate>20210701</enddate><creator>Lafata, Kyle J</creator><creator>Corradetti, Michael N</creator><creator>Gao, Junheng</creator><creator>Jacobs, Corbin D</creator><creator>Weng, Jingxi</creator><creator>Chang, Yushi</creator><creator>Wang, Chunhao</creator><creator>Hatch, Ace</creator><creator>Xanthopoulos, Eric</creator><creator>Jones, Greg</creator><creator>Kelsey, Chris R</creator><creator>Yin, Fang-Fang</creator><general>Radiological Society of North America</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-4810-8128</orcidid><orcidid>https://orcid.org/0000-0003-2745-3192</orcidid><orcidid>https://orcid.org/0000-0002-1621-8990</orcidid><orcidid>https://orcid.org/0000-0002-4513-6249</orcidid></search><sort><creationdate>20210701</creationdate><title>Radiogenomic Analysis of Locally Advanced Lung Cancer Based on CT Imaging and Intratreatment Changes in Cell-Free DNA</title><author>Lafata, Kyle J ; Corradetti, Michael N ; Gao, Junheng ; Jacobs, Corbin D ; Weng, Jingxi ; Chang, Yushi ; Wang, Chunhao ; Hatch, Ace ; Xanthopoulos, Eric ; Jones, Greg ; Kelsey, Chris R ; Yin, Fang-Fang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c396t-a3a098fb8cc1ae7e8aede8a9337178190fd07eeaa824bd45e9a3eeda7758dcb23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Aged</topic><topic>Biomarkers, Tumor - genetics</topic><topic>Brief Report</topic><topic>Cell-Free Nucleic Acids</topic><topic>Humans</topic><topic>Lung Neoplasms - diagnostic imaging</topic><topic>Middle Aged</topic><topic>Pilot Projects</topic><topic>Prospective Studies</topic><topic>Tomography, X-Ray Computed</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lafata, Kyle J</creatorcontrib><creatorcontrib>Corradetti, Michael N</creatorcontrib><creatorcontrib>Gao, Junheng</creatorcontrib><creatorcontrib>Jacobs, Corbin D</creatorcontrib><creatorcontrib>Weng, Jingxi</creatorcontrib><creatorcontrib>Chang, Yushi</creatorcontrib><creatorcontrib>Wang, Chunhao</creatorcontrib><creatorcontrib>Hatch, Ace</creatorcontrib><creatorcontrib>Xanthopoulos, Eric</creatorcontrib><creatorcontrib>Jones, Greg</creatorcontrib><creatorcontrib>Kelsey, Chris R</creatorcontrib><creatorcontrib>Yin, Fang-Fang</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Radiology. Imaging cancer</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lafata, Kyle J</au><au>Corradetti, Michael N</au><au>Gao, Junheng</au><au>Jacobs, Corbin D</au><au>Weng, Jingxi</au><au>Chang, Yushi</au><au>Wang, Chunhao</au><au>Hatch, Ace</au><au>Xanthopoulos, Eric</au><au>Jones, Greg</au><au>Kelsey, Chris R</au><au>Yin, Fang-Fang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Radiogenomic Analysis of Locally Advanced Lung Cancer Based on CT Imaging and Intratreatment Changes in Cell-Free DNA</atitle><jtitle>Radiology. Imaging cancer</jtitle><addtitle>Radiol Imaging Cancer</addtitle><date>2021-07-01</date><risdate>2021</risdate><volume>3</volume><issue>4</issue><spage>e200157</spage><pages>e200157-</pages><issn>2638-616X</issn><eissn>2638-616X</eissn><abstract>The radiologic appearance of locally advanced lung cancer may be linked to molecular changes of the disease during treatment, but characteristics of this phenomenon are poorly understood. Radiomics, liquid biopsy of cell-free DNA (cfDNA), and next-generation sequencing of circulating tumor DNA (ctDNA) encode tumor-specific radiogenomic expression patterns that can be probed to study this problem. Preliminary findings are reported from a radiogenomic analysis of CT imaging, cfDNA, and ctDNA in 24 patients (median age, 64 years; range, 49-74 years) with stage III lung cancer undergoing chemoradiation on a prospective pilot study (NCT00921739) between September 2009 and September 2014. Unsupervised clustering of radiomic signatures resulted in two clusters that were associated with ctDNA
mutations (
= .03) and changes in cfDNA concentration after 2 weeks of chemoradiation (
= .02). The radiomic features dissimilarity (hazard ratio [HR] = 0.56;
= .05), joint entropy (HR = 0.56;
= .04), sum entropy (HR = 0.53;
= .02), and normalized inverse difference (HR = 1.77;
= .05) were associated with overall survival. These results suggest heterogeneous and low-attenuating disease without a detectable ctDNA
mutation was associated with early surges of cfDNA concentration in response to therapy and a generally better prognosis.
CT-Quantitative, Radiation Therapy, Lung, Computer Applications-3D, Oncology, Tumor Response, Outcomes Analysis Clinical trial registration no. NCT00921739
© RSNA, 2021.</abstract><cop>United States</cop><pub>Radiological Society of North America</pub><pmid>34114913</pmid><doi>10.1148/rycan.2021200157</doi><orcidid>https://orcid.org/0000-0003-4810-8128</orcidid><orcidid>https://orcid.org/0000-0003-2745-3192</orcidid><orcidid>https://orcid.org/0000-0002-1621-8990</orcidid><orcidid>https://orcid.org/0000-0002-4513-6249</orcidid><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central |
subjects | Aged Biomarkers, Tumor - genetics Brief Report Cell-Free Nucleic Acids Humans Lung Neoplasms - diagnostic imaging Middle Aged Pilot Projects Prospective Studies Tomography, X-Ray Computed |
title | Radiogenomic Analysis of Locally Advanced Lung Cancer Based on CT Imaging and Intratreatment Changes in Cell-Free DNA |
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