DNA Barcoding of Andaliman (Zanthoxylum acanthopodium DC) from North Sumatra Province of Indonesia using maturase K Gene

DNA Barcoding of Andaliman (Zanthoxylum acanthopodium DC) from North Sumatra Province of Indonesia using maturase K Gene

Andaliman (Zanthoxylum acanthopodium DC) is a native plant of North Sumatra province. Zanthoxylum acanthopodium is a member of Rutaceae family widely found in northern Sumatra, Indonesia. The aim of this study was to barcode Z. acanthopodium in North Sumatra province, Indonesia based on cpDNA matura...

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Veröffentlicht in:Tropical life sciences research 2021-06, Vol.32 (2), p.15-28
Hauptverfasser: Suriani, Cicik, Prasetya, Eko, Harsono, Tri, Manurung, Johannes, Prakasa, Hary, Handayani, Dina, Jannah, Miftahul, Rachmawati, Yuanita
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container_end_page 28
container_issue 2
container_start_page 15
container_title Tropical life sciences research
container_volume 32
creator Suriani, Cicik
Prasetya, Eko
Harsono, Tri
Manurung, Johannes
Prakasa, Hary
Handayani, Dina
Jannah, Miftahul
Rachmawati, Yuanita
description Andaliman (Zanthoxylum acanthopodium DC) is a native plant of North Sumatra province. Zanthoxylum acanthopodium is a member of Rutaceae family widely found in northern Sumatra, Indonesia. The aim of this study was to barcode Z. acanthopodium in North Sumatra province, Indonesia based on cpDNA maturase K (matK). Samples were collected in seven localities across six regions of North Sumatra province. Phylogenetic analysis was conducted using Maximum Likelihood method. The results of phylogenetic analysis indicate that Z. acanthopodium is a monophyletic group that is derived from a common ancestor. The results of the phylogenetic tree construction show that there is a grouping of accession between Z. acanthopodium species separate from other species in the Zanthoxylum genus as well as those of the Rutaceae family. The results showed that cpDNA matK marker can effectively be used as DNA barcoding to identify Z. acanthopodium.
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title DNA Barcoding of Andaliman (Zanthoxylum acanthopodium DC) from North Sumatra Province of Indonesia using maturase K Gene
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