Gibbsiella quercinecans as new pathogen involved in bacterial canker of Russian olive
Russian olive ( Elaeagnus angustifolia ) is an economically important ornamental and crop plant. It has a wide range of biologically active compounds and is regarded as a unique medicinal plant with multiple applications. Members of the order Enterobacteriales isolated from trees are often associate...
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creator | Basavand, Esmaeil Khodaygan, Pejman Doonan, James M. Rahimian, Heshmatollah |
description | Russian olive (
Elaeagnus angustifolia
) is an economically important ornamental and crop plant. It has a wide range of biologically active compounds and is regarded as a unique medicinal plant with multiple applications. Members of the order
Enterobacteriales
isolated from trees are often associated with bacterial canker. During the growing season from 2017 to 2020, forty Gram-negative bacterial strains were isolated from Russian olive trees infected with cankers showing symptoms such as distinctive lesions on the trunk and branches, decline, weakness of trees, cracked bark, depressed brown to black lesions accompanied by exudation of gum, in the Kerman and Mazandaran Provinces of Iran. We used a polyphasic approach to identify and characterize these strains. Using a multilocus sequence analysis approach of four housekeeping loci, namely
atpD
,
rpoB
,
gyrB
,
infB
, and partial 16S rRNA gene sequences, isolates were identified as
Gibbsiella quercinecans
. These results were further supported by phenotypic and biochemical tests. Results of the biochemical, physiological and phenotypic experiments, indicated that the isolates are members of the
Enterobacteriales
and within the genus
Gibbsiella
. Pathogenicity of the
G. quercinecans
isolates was confirmed by fulfillment of Koch’s postulates. To our knowledge, this is the first report of
G. quercinecans
as the causal agent of bacterial canker of Russian olive trees. |
doi_str_mv | 10.1007/s13205-021-02849-x |
format | Article |
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Elaeagnus angustifolia
) is an economically important ornamental and crop plant. It has a wide range of biologically active compounds and is regarded as a unique medicinal plant with multiple applications. Members of the order
Enterobacteriales
isolated from trees are often associated with bacterial canker. During the growing season from 2017 to 2020, forty Gram-negative bacterial strains were isolated from Russian olive trees infected with cankers showing symptoms such as distinctive lesions on the trunk and branches, decline, weakness of trees, cracked bark, depressed brown to black lesions accompanied by exudation of gum, in the Kerman and Mazandaran Provinces of Iran. We used a polyphasic approach to identify and characterize these strains. Using a multilocus sequence analysis approach of four housekeeping loci, namely
atpD
,
rpoB
,
gyrB
,
infB
, and partial 16S rRNA gene sequences, isolates were identified as
Gibbsiella quercinecans
. These results were further supported by phenotypic and biochemical tests. Results of the biochemical, physiological and phenotypic experiments, indicated that the isolates are members of the
Enterobacteriales
and within the genus
Gibbsiella
. Pathogenicity of the
G. quercinecans
isolates was confirmed by fulfillment of Koch’s postulates. To our knowledge, this is the first report of
G. quercinecans
as the causal agent of bacterial canker of Russian olive trees.</description><identifier>ISSN: 2190-572X</identifier><identifier>EISSN: 2190-5738</identifier><identifier>DOI: 10.1007/s13205-021-02849-x</identifier><identifier>PMID: 34094805</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Agriculture ; Bacteria ; bacterial canker ; Bark ; Bioactive compounds ; Bioinformatics ; Biological activity ; Biomaterials ; Biotechnology ; Branches ; Cancer Research ; Canker ; Chemistry ; Chemistry and Materials Science ; crops ; decline ; Elaeagnus angustifolia ; Enterobacteriales ; Exudation ; Gene sequencing ; genes ; genus ; Gram-negative bacteria ; Herbal medicine ; Iran ; Lesions ; Medicinal plants ; multilocus sequence typing ; Original ; Original Article ; Ornamental plants ; Pathogenicity ; pathogens ; phenotype ; RpoB protein ; rRNA 16S ; Sequence analysis ; Stem Cells ; Strains (organisms) ; Trees</subject><ispartof>3 Biotech, 2021-06, Vol.11 (6), p.286-286, Article 286</ispartof><rights>King Abdulaziz City for Science and Technology 2021</rights><rights>King Abdulaziz City for Science and Technology 2021.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c484t-ab1f653c7901083accf270738dabe3b9cf8715e80166f50ca4804d293b5075223</citedby><cites>FETCH-LOGICAL-c484t-ab1f653c7901083accf270738dabe3b9cf8715e80166f50ca4804d293b5075223</cites><orcidid>0000-0002-5637-8905</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8140033/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8140033/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,41464,42533,51294,53766,53768</link.rule.ids></links><search><creatorcontrib>Basavand, Esmaeil</creatorcontrib><creatorcontrib>Khodaygan, Pejman</creatorcontrib><creatorcontrib>Doonan, James M.</creatorcontrib><creatorcontrib>Rahimian, Heshmatollah</creatorcontrib><title>Gibbsiella quercinecans as new pathogen involved in bacterial canker of Russian olive</title><title>3 Biotech</title><addtitle>3 Biotech</addtitle><description>Russian olive (
Elaeagnus angustifolia
) is an economically important ornamental and crop plant. It has a wide range of biologically active compounds and is regarded as a unique medicinal plant with multiple applications. Members of the order
Enterobacteriales
isolated from trees are often associated with bacterial canker. During the growing season from 2017 to 2020, forty Gram-negative bacterial strains were isolated from Russian olive trees infected with cankers showing symptoms such as distinctive lesions on the trunk and branches, decline, weakness of trees, cracked bark, depressed brown to black lesions accompanied by exudation of gum, in the Kerman and Mazandaran Provinces of Iran. We used a polyphasic approach to identify and characterize these strains. Using a multilocus sequence analysis approach of four housekeeping loci, namely
atpD
,
rpoB
,
gyrB
,
infB
, and partial 16S rRNA gene sequences, isolates were identified as
Gibbsiella quercinecans
. These results were further supported by phenotypic and biochemical tests. Results of the biochemical, physiological and phenotypic experiments, indicated that the isolates are members of the
Enterobacteriales
and within the genus
Gibbsiella
. Pathogenicity of the
G. quercinecans
isolates was confirmed by fulfillment of Koch’s postulates. To our knowledge, this is the first report of
G. quercinecans
as the causal agent of bacterial canker of Russian olive trees.</description><subject>Agriculture</subject><subject>Bacteria</subject><subject>bacterial canker</subject><subject>Bark</subject><subject>Bioactive compounds</subject><subject>Bioinformatics</subject><subject>Biological activity</subject><subject>Biomaterials</subject><subject>Biotechnology</subject><subject>Branches</subject><subject>Cancer Research</subject><subject>Canker</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>crops</subject><subject>decline</subject><subject>Elaeagnus angustifolia</subject><subject>Enterobacteriales</subject><subject>Exudation</subject><subject>Gene sequencing</subject><subject>genes</subject><subject>genus</subject><subject>Gram-negative bacteria</subject><subject>Herbal medicine</subject><subject>Iran</subject><subject>Lesions</subject><subject>Medicinal plants</subject><subject>multilocus sequence typing</subject><subject>Original</subject><subject>Original Article</subject><subject>Ornamental plants</subject><subject>Pathogenicity</subject><subject>pathogens</subject><subject>phenotype</subject><subject>RpoB protein</subject><subject>rRNA 16S</subject><subject>Sequence analysis</subject><subject>Stem Cells</subject><subject>Strains (organisms)</subject><subject>Trees</subject><issn>2190-572X</issn><issn>2190-5738</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNqNkU1rGzEQhkVpSUKSP5CToJdethl9ebWXQgnNBwQKIYHehFaeteWuJUfadZJ_Xzk2LumhRCA0oGde3pmXkDMGXxlAfZ6Z4KAq4KxcLZvq-QM54qyBStVCf9zX_NchOc15AeUophoGB-RQSGikBnVEHq5822aPfW_p44jJ-YDOhkxtpgGf6MoO8zjDQH1Yx36N01LQ1roBk7c9LehvTDR29G7M2dtAY-_XeEI-dbbPeLp7j8nD5Y_7i-vq9ufVzcX328pJLYfKtqybKOHqBhhoYZ3reA3F_tS2KNrGdbpmCjWwyaRT4GzxLKe8Ea2CWnEujsm3re5qbJc4dRiGZHuzSn5p04uJ1pu3P8HPzSyujWYSQIgi8GUnkGIZPw9m6bPbbCNgHLPhSnHgsqn5O1BR3NVa6IJ-_gddxDGFsokNBZJrpieF4lvKpZhzwm7vm4HZZGy2GZuSsXnN2DyXJrFtygUOM0x_pf_T9QfEn6g2</recordid><startdate>20210601</startdate><enddate>20210601</enddate><creator>Basavand, Esmaeil</creator><creator>Khodaygan, Pejman</creator><creator>Doonan, James M.</creator><creator>Rahimian, Heshmatollah</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-5637-8905</orcidid></search><sort><creationdate>20210601</creationdate><title>Gibbsiella quercinecans as new pathogen involved in bacterial canker of Russian olive</title><author>Basavand, Esmaeil ; Khodaygan, Pejman ; Doonan, James M. ; Rahimian, Heshmatollah</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c484t-ab1f653c7901083accf270738dabe3b9cf8715e80166f50ca4804d293b5075223</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Agriculture</topic><topic>Bacteria</topic><topic>bacterial canker</topic><topic>Bark</topic><topic>Bioactive compounds</topic><topic>Bioinformatics</topic><topic>Biological activity</topic><topic>Biomaterials</topic><topic>Biotechnology</topic><topic>Branches</topic><topic>Cancer Research</topic><topic>Canker</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>crops</topic><topic>decline</topic><topic>Elaeagnus angustifolia</topic><topic>Enterobacteriales</topic><topic>Exudation</topic><topic>Gene sequencing</topic><topic>genes</topic><topic>genus</topic><topic>Gram-negative bacteria</topic><topic>Herbal medicine</topic><topic>Iran</topic><topic>Lesions</topic><topic>Medicinal plants</topic><topic>multilocus sequence typing</topic><topic>Original</topic><topic>Original Article</topic><topic>Ornamental plants</topic><topic>Pathogenicity</topic><topic>pathogens</topic><topic>phenotype</topic><topic>RpoB protein</topic><topic>rRNA 16S</topic><topic>Sequence analysis</topic><topic>Stem Cells</topic><topic>Strains (organisms)</topic><topic>Trees</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Basavand, Esmaeil</creatorcontrib><creatorcontrib>Khodaygan, Pejman</creatorcontrib><creatorcontrib>Doonan, James M.</creatorcontrib><creatorcontrib>Rahimian, Heshmatollah</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>3 Biotech</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Basavand, Esmaeil</au><au>Khodaygan, Pejman</au><au>Doonan, James M.</au><au>Rahimian, Heshmatollah</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Gibbsiella quercinecans as new pathogen involved in bacterial canker of Russian olive</atitle><jtitle>3 Biotech</jtitle><stitle>3 Biotech</stitle><date>2021-06-01</date><risdate>2021</risdate><volume>11</volume><issue>6</issue><spage>286</spage><epage>286</epage><pages>286-286</pages><artnum>286</artnum><issn>2190-572X</issn><eissn>2190-5738</eissn><abstract>Russian olive (
Elaeagnus angustifolia
) is an economically important ornamental and crop plant. It has a wide range of biologically active compounds and is regarded as a unique medicinal plant with multiple applications. Members of the order
Enterobacteriales
isolated from trees are often associated with bacterial canker. During the growing season from 2017 to 2020, forty Gram-negative bacterial strains were isolated from Russian olive trees infected with cankers showing symptoms such as distinctive lesions on the trunk and branches, decline, weakness of trees, cracked bark, depressed brown to black lesions accompanied by exudation of gum, in the Kerman and Mazandaran Provinces of Iran. We used a polyphasic approach to identify and characterize these strains. Using a multilocus sequence analysis approach of four housekeeping loci, namely
atpD
,
rpoB
,
gyrB
,
infB
, and partial 16S rRNA gene sequences, isolates were identified as
Gibbsiella quercinecans
. These results were further supported by phenotypic and biochemical tests. Results of the biochemical, physiological and phenotypic experiments, indicated that the isolates are members of the
Enterobacteriales
and within the genus
Gibbsiella
. Pathogenicity of the
G. quercinecans
isolates was confirmed by fulfillment of Koch’s postulates. To our knowledge, this is the first report of
G. quercinecans
as the causal agent of bacterial canker of Russian olive trees.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>34094805</pmid><doi>10.1007/s13205-021-02849-x</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-5637-8905</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Agriculture Bacteria bacterial canker Bark Bioactive compounds Bioinformatics Biological activity Biomaterials Biotechnology Branches Cancer Research Canker Chemistry Chemistry and Materials Science crops decline Elaeagnus angustifolia Enterobacteriales Exudation Gene sequencing genes genus Gram-negative bacteria Herbal medicine Iran Lesions Medicinal plants multilocus sequence typing Original Original Article Ornamental plants Pathogenicity pathogens phenotype RpoB protein rRNA 16S Sequence analysis Stem Cells Strains (organisms) Trees |
title | Gibbsiella quercinecans as new pathogen involved in bacterial canker of Russian olive |
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