Interdependent evolution of biosynthetic gene clusters for momilactone production in rice
Plants can contain biosynthetic gene clusters (BGCs) that nominally resemble those found in microbes. However, while horizontal gene transmission is often observed in microbes, plants are limited to vertical gene transmission, implying that their BGCs may exhibit distinct inheritance patterns. Rice...
Gespeichert in:
Veröffentlicht in: | The Plant cell 2021-04, Vol.33 (2), p.290-305 |
---|---|
Hauptverfasser: | , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 305 |
---|---|
container_issue | 2 |
container_start_page | 290 |
container_title | The Plant cell |
container_volume | 33 |
creator | Kitaoka, Naoki Zhang, Juan Oyagbenro, Richard K Brown, Benjamin Wu, Yisheng Yang, Bing Li, Zhaohu Peters, Reuben J |
description | Plants can contain biosynthetic gene clusters (BGCs) that nominally resemble those found in microbes. However, while horizontal gene transmission is often observed in microbes, plants are limited to vertical gene transmission, implying that their BGCs may exhibit distinct inheritance patterns. Rice (Oryza sativa) contains two unlinked BGCs involved in diterpenoid phytoalexin metabolism, with one clearly required for momilactone biosynthesis, while the other is associated with production of phytocassanes. Here, in the process of elucidating momilactone biosynthesis, genetic evidence was found demonstrating a role for a cytochrome P450 (CYP) from the other "phytocassane" BGC. This CYP76M8 acts after the CYP99A2/3 from the "momilactone" BGC, producing a hemiacetal intermediate that is oxidized to the eponymous lactone by a short-chain alcohol dehydrogenase also from this BGC. Thus, the "momilactone" BGC is not only incomplete, but also fractured by the need for CYP76M8 to act in between steps catalyzed by enzymes from this BGC. Moreover, as supported by similar activity observed with orthologs from the momilactone-producing wild-rice species Oryza punctata, the presence of CYP76M8 in the other "phytocassane" BGC indicates interdependent evolution of these two BGCs, highlighting the distinct nature of BGC assembly in plants. |
doi_str_mv | 10.1093/plcell/koaa023 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8136919</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2508564710</sourcerecordid><originalsourceid>FETCH-LOGICAL-c456t-b8f562ba89ac64c7d177dce12c87ff5974098cdde7a0a5d1ad6af0ca9a1b18e43</originalsourceid><addsrcrecordid>eNpVkc1LxDAQxYMorq5ePUqPXlaTpm2aiyDiFyx4UdBTSJOJG22TmqQL_vd23VXW0wzMe2-G-SF0QvA5wZxe9K2Ctr348FLinO6gA1LSfJbz-mV3q5-gwxjfMcaEEb6PJpQyTlnFD9Drg0sQNPTgNLiUwdK3Q7LeZd5kjfXxy6UFJKuyN3CQqXaIoz5mxoes851tpUp-HPTB60H9GK3LglVwhPaMbCMcb-oUPd_ePF3fz-aPdw_XV_OZKsoqzZralFXeyJpLVRWKacKYVkByVTNjSs4KzGulNTCJZamJ1JU0WEkuSUNqKOgUXa5z-6HpYLS6FGQr-mA7Gb6El1b8nzi7EG9-KWpCK074GHC2CQj-c4CYRGfj6qvSgR-iyEtcl1XBCB6l52upCj7GAOZvDcFixUOseYgNj9Fwun3cn_wXAP0GiFmNyA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2508564710</pqid></control><display><type>article</type><title>Interdependent evolution of biosynthetic gene clusters for momilactone production in rice</title><source>MEDLINE</source><source>JSTOR Archive Collection A-Z Listing</source><source>Oxford University Press Journals All Titles (1996-Current)</source><source>EZB-FREE-00999 freely available EZB journals</source><creator>Kitaoka, Naoki ; Zhang, Juan ; Oyagbenro, Richard K ; Brown, Benjamin ; Wu, Yisheng ; Yang, Bing ; Li, Zhaohu ; Peters, Reuben J</creator><creatorcontrib>Kitaoka, Naoki ; Zhang, Juan ; Oyagbenro, Richard K ; Brown, Benjamin ; Wu, Yisheng ; Yang, Bing ; Li, Zhaohu ; Peters, Reuben J</creatorcontrib><description>Plants can contain biosynthetic gene clusters (BGCs) that nominally resemble those found in microbes. However, while horizontal gene transmission is often observed in microbes, plants are limited to vertical gene transmission, implying that their BGCs may exhibit distinct inheritance patterns. Rice (Oryza sativa) contains two unlinked BGCs involved in diterpenoid phytoalexin metabolism, with one clearly required for momilactone biosynthesis, while the other is associated with production of phytocassanes. Here, in the process of elucidating momilactone biosynthesis, genetic evidence was found demonstrating a role for a cytochrome P450 (CYP) from the other "phytocassane" BGC. This CYP76M8 acts after the CYP99A2/3 from the "momilactone" BGC, producing a hemiacetal intermediate that is oxidized to the eponymous lactone by a short-chain alcohol dehydrogenase also from this BGC. Thus, the "momilactone" BGC is not only incomplete, but also fractured by the need for CYP76M8 to act in between steps catalyzed by enzymes from this BGC. Moreover, as supported by similar activity observed with orthologs from the momilactone-producing wild-rice species Oryza punctata, the presence of CYP76M8 in the other "phytocassane" BGC indicates interdependent evolution of these two BGCs, highlighting the distinct nature of BGC assembly in plants.</description><identifier>ISSN: 1532-298X</identifier><identifier>ISSN: 1040-4651</identifier><identifier>EISSN: 1532-298X</identifier><identifier>DOI: 10.1093/plcell/koaa023</identifier><identifier>PMID: 33793769</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Biological Evolution ; Biosynthetic Pathways - genetics ; Diterpenes - chemistry ; Diterpenes - metabolism ; Gene Expression Regulation, Plant ; Multigene Family ; Oryza - genetics ; Oxidation-Reduction ; Plant Proteins - genetics ; Plant Proteins - metabolism</subject><ispartof>The Plant cell, 2021-04, Vol.33 (2), p.290-305</ispartof><rights>American Society of Plant Biologists 2020. All rights reserved. For permissions, please email: journals.permissions@oup.com.</rights><rights>American Society of Plant Biologists 2020. All rights reserved. For permissions, please email: journals.permissions@oup.com 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c456t-b8f562ba89ac64c7d177dce12c87ff5974098cdde7a0a5d1ad6af0ca9a1b18e43</citedby><cites>FETCH-LOGICAL-c456t-b8f562ba89ac64c7d177dce12c87ff5974098cdde7a0a5d1ad6af0ca9a1b18e43</cites><orcidid>0000-0003-4031-1455 ; 0000-0002-3826-4373 ; 0000-0002-9142-0451 ; 0000-0001-8608-1785 ; 0000-0003-4963-8534 ; 0000-0001-6337-4438 ; 0000-0003-4691-8477 ; 0000-0002-2293-3384</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33793769$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kitaoka, Naoki</creatorcontrib><creatorcontrib>Zhang, Juan</creatorcontrib><creatorcontrib>Oyagbenro, Richard K</creatorcontrib><creatorcontrib>Brown, Benjamin</creatorcontrib><creatorcontrib>Wu, Yisheng</creatorcontrib><creatorcontrib>Yang, Bing</creatorcontrib><creatorcontrib>Li, Zhaohu</creatorcontrib><creatorcontrib>Peters, Reuben J</creatorcontrib><title>Interdependent evolution of biosynthetic gene clusters for momilactone production in rice</title><title>The Plant cell</title><addtitle>Plant Cell</addtitle><description>Plants can contain biosynthetic gene clusters (BGCs) that nominally resemble those found in microbes. However, while horizontal gene transmission is often observed in microbes, plants are limited to vertical gene transmission, implying that their BGCs may exhibit distinct inheritance patterns. Rice (Oryza sativa) contains two unlinked BGCs involved in diterpenoid phytoalexin metabolism, with one clearly required for momilactone biosynthesis, while the other is associated with production of phytocassanes. Here, in the process of elucidating momilactone biosynthesis, genetic evidence was found demonstrating a role for a cytochrome P450 (CYP) from the other "phytocassane" BGC. This CYP76M8 acts after the CYP99A2/3 from the "momilactone" BGC, producing a hemiacetal intermediate that is oxidized to the eponymous lactone by a short-chain alcohol dehydrogenase also from this BGC. Thus, the "momilactone" BGC is not only incomplete, but also fractured by the need for CYP76M8 to act in between steps catalyzed by enzymes from this BGC. Moreover, as supported by similar activity observed with orthologs from the momilactone-producing wild-rice species Oryza punctata, the presence of CYP76M8 in the other "phytocassane" BGC indicates interdependent evolution of these two BGCs, highlighting the distinct nature of BGC assembly in plants.</description><subject>Biological Evolution</subject><subject>Biosynthetic Pathways - genetics</subject><subject>Diterpenes - chemistry</subject><subject>Diterpenes - metabolism</subject><subject>Gene Expression Regulation, Plant</subject><subject>Multigene Family</subject><subject>Oryza - genetics</subject><subject>Oxidation-Reduction</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><issn>1532-298X</issn><issn>1040-4651</issn><issn>1532-298X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkc1LxDAQxYMorq5ePUqPXlaTpm2aiyDiFyx4UdBTSJOJG22TmqQL_vd23VXW0wzMe2-G-SF0QvA5wZxe9K2Ctr348FLinO6gA1LSfJbz-mV3q5-gwxjfMcaEEb6PJpQyTlnFD9Drg0sQNPTgNLiUwdK3Q7LeZd5kjfXxy6UFJKuyN3CQqXaIoz5mxoes851tpUp-HPTB60H9GK3LglVwhPaMbCMcb-oUPd_ePF3fz-aPdw_XV_OZKsoqzZralFXeyJpLVRWKacKYVkByVTNjSs4KzGulNTCJZamJ1JU0WEkuSUNqKOgUXa5z-6HpYLS6FGQr-mA7Gb6El1b8nzi7EG9-KWpCK074GHC2CQj-c4CYRGfj6qvSgR-iyEtcl1XBCB6l52upCj7GAOZvDcFixUOseYgNj9Fwun3cn_wXAP0GiFmNyA</recordid><startdate>20210417</startdate><enddate>20210417</enddate><creator>Kitaoka, Naoki</creator><creator>Zhang, Juan</creator><creator>Oyagbenro, Richard K</creator><creator>Brown, Benjamin</creator><creator>Wu, Yisheng</creator><creator>Yang, Bing</creator><creator>Li, Zhaohu</creator><creator>Peters, Reuben J</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-4031-1455</orcidid><orcidid>https://orcid.org/0000-0002-3826-4373</orcidid><orcidid>https://orcid.org/0000-0002-9142-0451</orcidid><orcidid>https://orcid.org/0000-0001-8608-1785</orcidid><orcidid>https://orcid.org/0000-0003-4963-8534</orcidid><orcidid>https://orcid.org/0000-0001-6337-4438</orcidid><orcidid>https://orcid.org/0000-0003-4691-8477</orcidid><orcidid>https://orcid.org/0000-0002-2293-3384</orcidid></search><sort><creationdate>20210417</creationdate><title>Interdependent evolution of biosynthetic gene clusters for momilactone production in rice</title><author>Kitaoka, Naoki ; Zhang, Juan ; Oyagbenro, Richard K ; Brown, Benjamin ; Wu, Yisheng ; Yang, Bing ; Li, Zhaohu ; Peters, Reuben J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c456t-b8f562ba89ac64c7d177dce12c87ff5974098cdde7a0a5d1ad6af0ca9a1b18e43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Biological Evolution</topic><topic>Biosynthetic Pathways - genetics</topic><topic>Diterpenes - chemistry</topic><topic>Diterpenes - metabolism</topic><topic>Gene Expression Regulation, Plant</topic><topic>Multigene Family</topic><topic>Oryza - genetics</topic><topic>Oxidation-Reduction</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kitaoka, Naoki</creatorcontrib><creatorcontrib>Zhang, Juan</creatorcontrib><creatorcontrib>Oyagbenro, Richard K</creatorcontrib><creatorcontrib>Brown, Benjamin</creatorcontrib><creatorcontrib>Wu, Yisheng</creatorcontrib><creatorcontrib>Yang, Bing</creatorcontrib><creatorcontrib>Li, Zhaohu</creatorcontrib><creatorcontrib>Peters, Reuben J</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The Plant cell</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kitaoka, Naoki</au><au>Zhang, Juan</au><au>Oyagbenro, Richard K</au><au>Brown, Benjamin</au><au>Wu, Yisheng</au><au>Yang, Bing</au><au>Li, Zhaohu</au><au>Peters, Reuben J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Interdependent evolution of biosynthetic gene clusters for momilactone production in rice</atitle><jtitle>The Plant cell</jtitle><addtitle>Plant Cell</addtitle><date>2021-04-17</date><risdate>2021</risdate><volume>33</volume><issue>2</issue><spage>290</spage><epage>305</epage><pages>290-305</pages><issn>1532-298X</issn><issn>1040-4651</issn><eissn>1532-298X</eissn><abstract>Plants can contain biosynthetic gene clusters (BGCs) that nominally resemble those found in microbes. However, while horizontal gene transmission is often observed in microbes, plants are limited to vertical gene transmission, implying that their BGCs may exhibit distinct inheritance patterns. Rice (Oryza sativa) contains two unlinked BGCs involved in diterpenoid phytoalexin metabolism, with one clearly required for momilactone biosynthesis, while the other is associated with production of phytocassanes. Here, in the process of elucidating momilactone biosynthesis, genetic evidence was found demonstrating a role for a cytochrome P450 (CYP) from the other "phytocassane" BGC. This CYP76M8 acts after the CYP99A2/3 from the "momilactone" BGC, producing a hemiacetal intermediate that is oxidized to the eponymous lactone by a short-chain alcohol dehydrogenase also from this BGC. Thus, the "momilactone" BGC is not only incomplete, but also fractured by the need for CYP76M8 to act in between steps catalyzed by enzymes from this BGC. Moreover, as supported by similar activity observed with orthologs from the momilactone-producing wild-rice species Oryza punctata, the presence of CYP76M8 in the other "phytocassane" BGC indicates interdependent evolution of these two BGCs, highlighting the distinct nature of BGC assembly in plants.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>33793769</pmid><doi>10.1093/plcell/koaa023</doi><tpages>16</tpages><orcidid>https://orcid.org/0000-0003-4031-1455</orcidid><orcidid>https://orcid.org/0000-0002-3826-4373</orcidid><orcidid>https://orcid.org/0000-0002-9142-0451</orcidid><orcidid>https://orcid.org/0000-0001-8608-1785</orcidid><orcidid>https://orcid.org/0000-0003-4963-8534</orcidid><orcidid>https://orcid.org/0000-0001-6337-4438</orcidid><orcidid>https://orcid.org/0000-0003-4691-8477</orcidid><orcidid>https://orcid.org/0000-0002-2293-3384</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1532-298X |
ispartof | The Plant cell, 2021-04, Vol.33 (2), p.290-305 |
issn | 1532-298X 1040-4651 1532-298X |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_8136919 |
source | MEDLINE; JSTOR Archive Collection A-Z Listing; Oxford University Press Journals All Titles (1996-Current); EZB-FREE-00999 freely available EZB journals |
subjects | Biological Evolution Biosynthetic Pathways - genetics Diterpenes - chemistry Diterpenes - metabolism Gene Expression Regulation, Plant Multigene Family Oryza - genetics Oxidation-Reduction Plant Proteins - genetics Plant Proteins - metabolism |
title | Interdependent evolution of biosynthetic gene clusters for momilactone production in rice |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-21T12%3A56%3A26IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Interdependent%20evolution%20of%20biosynthetic%20gene%20clusters%20for%20momilactone%20production%20in%20rice&rft.jtitle=The%20Plant%20cell&rft.au=Kitaoka,%20Naoki&rft.date=2021-04-17&rft.volume=33&rft.issue=2&rft.spage=290&rft.epage=305&rft.pages=290-305&rft.issn=1532-298X&rft.eissn=1532-298X&rft_id=info:doi/10.1093/plcell/koaa023&rft_dat=%3Cproquest_pubme%3E2508564710%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2508564710&rft_id=info:pmid/33793769&rfr_iscdi=true |