Artificial Intelligence Techniques for Prostate Cancer Detection through Dual-Channel Tissue Feature Engineering
The optimal diagnostic and treatment strategies for prostate cancer (PCa) are constantly changing. Given the importance of accurate diagnosis, texture analysis of stained prostate tissues is important for automatic PCa detection. We used artificial intelligence (AI) techniques to classify dual-chann...
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Veröffentlicht in: | Cancers 2021-03, Vol.13 (7), p.1524 |
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description | The optimal diagnostic and treatment strategies for prostate cancer (PCa) are constantly changing. Given the importance of accurate diagnosis, texture analysis of stained prostate tissues is important for automatic PCa detection. We used artificial intelligence (AI) techniques to classify dual-channel tissue features extracted from Hematoxylin and Eosin (H&E) tissue images, respectively. Tissue feature engineering was performed to extract first-order statistic (FOS)-based textural features from each stained channel, and cancer classification between benign and malignant was carried out based on important features. Recursive feature elimination (RFE) and one-way analysis of variance (ANOVA) methods were used to identify significant features, which provided the best five features out of the extracted six features. The AI techniques used in this study for binary classification (benign vs. malignant and low-grade vs. high-grade) were support vector machine (SVM), logistic regression (LR), bagging tree, boosting tree, and dual-channel bidirectional long short-term memory (DC-BiLSTM) network. Further, a comparative analysis was carried out between the AI algorithms. Two different datasets were used for PCa classification. Out of these, the first dataset (private) was used for training and testing the AI models and the second dataset (public) was used only for testing to evaluate model performance. The automatic AI classification system performed well and showed satisfactory results according to the hypothesis of this study. |
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Given the importance of accurate diagnosis, texture analysis of stained prostate tissues is important for automatic PCa detection. We used artificial intelligence (AI) techniques to classify dual-channel tissue features extracted from Hematoxylin and Eosin (H&E) tissue images, respectively. Tissue feature engineering was performed to extract first-order statistic (FOS)-based textural features from each stained channel, and cancer classification between benign and malignant was carried out based on important features. Recursive feature elimination (RFE) and one-way analysis of variance (ANOVA) methods were used to identify significant features, which provided the best five features out of the extracted six features. The AI techniques used in this study for binary classification (benign vs. malignant and low-grade vs. high-grade) were support vector machine (SVM), logistic regression (LR), bagging tree, boosting tree, and dual-channel bidirectional long short-term memory (DC-BiLSTM) network. Further, a comparative analysis was carried out between the AI algorithms. Two different datasets were used for PCa classification. Out of these, the first dataset (private) was used for training and testing the AI models and the second dataset (public) was used only for testing to evaluate model performance. The automatic AI classification system performed well and showed satisfactory results according to the hypothesis of this study.</description><identifier>ISSN: 2072-6694</identifier><identifier>EISSN: 2072-6694</identifier><identifier>DOI: 10.3390/cancers13071524</identifier><identifier>PMID: 33810251</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Artificial intelligence ; Biopsy ; Cardiovascular disease ; Classification ; Comparative analysis ; Data collection ; Datasets ; Immunological memory ; Long short-term memory ; Medical diagnosis ; Neural networks ; Prostate cancer ; Radiomics ; Stains & staining ; Support vector machines ; Tumors</subject><ispartof>Cancers, 2021-03, Vol.13 (7), p.1524</ispartof><rights>2021 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2021 by the authors. 2021</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c421t-fe6772cd92a929f2935a2e44ddd7b8903c3c68bb0bde29ccbcb3fbf025d2fac33</citedby><cites>FETCH-LOGICAL-c421t-fe6772cd92a929f2935a2e44ddd7b8903c3c68bb0bde29ccbcb3fbf025d2fac33</cites><orcidid>0000-0002-6036-6915 ; 0000-0002-1372-7052</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8036750/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8036750/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33810251$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Cho-Hee</creatorcontrib><creatorcontrib>Bhattacharjee, Subrata</creatorcontrib><creatorcontrib>Prakash, Deekshitha</creatorcontrib><creatorcontrib>Kang, Suki</creatorcontrib><creatorcontrib>Cho, Nam-Hoon</creatorcontrib><creatorcontrib>Kim, Hee-Cheol</creatorcontrib><creatorcontrib>Choi, Heung-Kook</creatorcontrib><title>Artificial Intelligence Techniques for Prostate Cancer Detection through Dual-Channel Tissue Feature Engineering</title><title>Cancers</title><addtitle>Cancers (Basel)</addtitle><description>The optimal diagnostic and treatment strategies for prostate cancer (PCa) are constantly changing. Given the importance of accurate diagnosis, texture analysis of stained prostate tissues is important for automatic PCa detection. We used artificial intelligence (AI) techniques to classify dual-channel tissue features extracted from Hematoxylin and Eosin (H&E) tissue images, respectively. Tissue feature engineering was performed to extract first-order statistic (FOS)-based textural features from each stained channel, and cancer classification between benign and malignant was carried out based on important features. Recursive feature elimination (RFE) and one-way analysis of variance (ANOVA) methods were used to identify significant features, which provided the best five features out of the extracted six features. The AI techniques used in this study for binary classification (benign vs. malignant and low-grade vs. high-grade) were support vector machine (SVM), logistic regression (LR), bagging tree, boosting tree, and dual-channel bidirectional long short-term memory (DC-BiLSTM) network. Further, a comparative analysis was carried out between the AI algorithms. Two different datasets were used for PCa classification. Out of these, the first dataset (private) was used for training and testing the AI models and the second dataset (public) was used only for testing to evaluate model performance. The automatic AI classification system performed well and showed satisfactory results according to the hypothesis of this study.</description><subject>Artificial intelligence</subject><subject>Biopsy</subject><subject>Cardiovascular disease</subject><subject>Classification</subject><subject>Comparative analysis</subject><subject>Data collection</subject><subject>Datasets</subject><subject>Immunological memory</subject><subject>Long short-term memory</subject><subject>Medical diagnosis</subject><subject>Neural networks</subject><subject>Prostate cancer</subject><subject>Radiomics</subject><subject>Stains & staining</subject><subject>Support vector machines</subject><subject>Tumors</subject><issn>2072-6694</issn><issn>2072-6694</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNpdkc1rHSEUxSW0JCHNOrsidNPNNHqdGWc2hfCStIFAu3hdi-NcZwzz9FWdQP_7muaDNG4U_Hmu5xxCzjj7IkTPzo32BmPigkneQH1AjoFJqNq2r9-9Oh-R05TuWFlCcNnKQ3IkRMcZNPyY7C9idtYZpxd64zMui5uwyNItmtm73ysmakOkP2NIWWekm39D6SVmNNkFT_McwzrN9HLVS7WZtfe40K1LaUV6jTqvEemVn5xHjM5PH8h7q5eEp0_7Cfl1fbXdfK9uf3y72VzcVqYGniuLrZRgxh50D72FXjQasK7HcZRD1zNhhGm7YWDDiNAbM5hB2MEWUyNYbYQ4IV8fdffrsMPRoM9RL2of3U7HPypop_6_8W5WU7hXHROtbFgR-PwkEMNDDFntXDIlIO0xrElBw7pGCoC2oJ_eoHdhjb7YK1QtWy46gEKdP1KmZJki2pfPcKYeClVvCi0vPr728MI_1yf-AhSyoEc</recordid><startdate>20210326</startdate><enddate>20210326</enddate><creator>Kim, Cho-Hee</creator><creator>Bhattacharjee, Subrata</creator><creator>Prakash, Deekshitha</creator><creator>Kang, Suki</creator><creator>Cho, Nam-Hoon</creator><creator>Kim, Hee-Cheol</creator><creator>Choi, Heung-Kook</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7T5</scope><scope>7TO</scope><scope>7XB</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M2O</scope><scope>M7P</scope><scope>MBDVC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-6036-6915</orcidid><orcidid>https://orcid.org/0000-0002-1372-7052</orcidid></search><sort><creationdate>20210326</creationdate><title>Artificial Intelligence Techniques for Prostate Cancer Detection through Dual-Channel Tissue Feature Engineering</title><author>Kim, Cho-Hee ; Bhattacharjee, Subrata ; Prakash, Deekshitha ; Kang, Suki ; Cho, Nam-Hoon ; Kim, Hee-Cheol ; Choi, Heung-Kook</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c421t-fe6772cd92a929f2935a2e44ddd7b8903c3c68bb0bde29ccbcb3fbf025d2fac33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Artificial intelligence</topic><topic>Biopsy</topic><topic>Cardiovascular disease</topic><topic>Classification</topic><topic>Comparative analysis</topic><topic>Data collection</topic><topic>Datasets</topic><topic>Immunological memory</topic><topic>Long short-term memory</topic><topic>Medical diagnosis</topic><topic>Neural networks</topic><topic>Prostate cancer</topic><topic>Radiomics</topic><topic>Stains & staining</topic><topic>Support vector machines</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Cho-Hee</creatorcontrib><creatorcontrib>Bhattacharjee, Subrata</creatorcontrib><creatorcontrib>Prakash, Deekshitha</creatorcontrib><creatorcontrib>Kang, Suki</creatorcontrib><creatorcontrib>Cho, Nam-Hoon</creatorcontrib><creatorcontrib>Kim, Hee-Cheol</creatorcontrib><creatorcontrib>Choi, Heung-Kook</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Immunology Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Research Library</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Cancers</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Cho-Hee</au><au>Bhattacharjee, Subrata</au><au>Prakash, Deekshitha</au><au>Kang, Suki</au><au>Cho, Nam-Hoon</au><au>Kim, Hee-Cheol</au><au>Choi, Heung-Kook</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Artificial Intelligence Techniques for Prostate Cancer Detection through Dual-Channel Tissue Feature Engineering</atitle><jtitle>Cancers</jtitle><addtitle>Cancers (Basel)</addtitle><date>2021-03-26</date><risdate>2021</risdate><volume>13</volume><issue>7</issue><spage>1524</spage><pages>1524-</pages><issn>2072-6694</issn><eissn>2072-6694</eissn><abstract>The optimal diagnostic and treatment strategies for prostate cancer (PCa) are constantly changing. Given the importance of accurate diagnosis, texture analysis of stained prostate tissues is important for automatic PCa detection. We used artificial intelligence (AI) techniques to classify dual-channel tissue features extracted from Hematoxylin and Eosin (H&E) tissue images, respectively. Tissue feature engineering was performed to extract first-order statistic (FOS)-based textural features from each stained channel, and cancer classification between benign and malignant was carried out based on important features. Recursive feature elimination (RFE) and one-way analysis of variance (ANOVA) methods were used to identify significant features, which provided the best five features out of the extracted six features. The AI techniques used in this study for binary classification (benign vs. malignant and low-grade vs. high-grade) were support vector machine (SVM), logistic regression (LR), bagging tree, boosting tree, and dual-channel bidirectional long short-term memory (DC-BiLSTM) network. Further, a comparative analysis was carried out between the AI algorithms. Two different datasets were used for PCa classification. Out of these, the first dataset (private) was used for training and testing the AI models and the second dataset (public) was used only for testing to evaluate model performance. The automatic AI classification system performed well and showed satisfactory results according to the hypothesis of this study.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>33810251</pmid><doi>10.3390/cancers13071524</doi><orcidid>https://orcid.org/0000-0002-6036-6915</orcidid><orcidid>https://orcid.org/0000-0002-1372-7052</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Artificial intelligence Biopsy Cardiovascular disease Classification Comparative analysis Data collection Datasets Immunological memory Long short-term memory Medical diagnosis Neural networks Prostate cancer Radiomics Stains & staining Support vector machines Tumors |
title | Artificial Intelligence Techniques for Prostate Cancer Detection through Dual-Channel Tissue Feature Engineering |
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