Correlation of Perfusion Parameters with Genes Related to Angiogenesis Regulation in Glioblastoma: A Feasibility Study
Integration of imaging and genomic data is critical for a better understanding of gliomas, particularly considering the increasing focus on the use of imaging biomarkers for patient survival and treatment response. The purpose of this study was to correlate CBV and PS measured by using PCT with the...
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Veröffentlicht in: | American journal of neuroradiology : AJNR 2012-08, Vol.33 (7), p.1343-1348 |
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description | Integration of imaging and genomic data is critical for a better understanding of gliomas, particularly considering the increasing focus on the use of imaging biomarkers for patient survival and treatment response. The purpose of this study was to correlate CBV and PS measured by using PCT with the genes regulating angiogenesis in GBM.
Eighteen patients with WHO grade IV gliomas underwent pretreatment PCT and measurement of CBV and PS values from enhancing tumor. Tumor specimens were analyzed by TCGA by using Human Gene Expression Microarrays and were interrogated for correlation between CBV and PS estimates across the genome. We used the GO biologic process pathways for angiogenesis regulation to select genes of interest.
We observed expression levels for 92 angiogenesis-associated genes (332 probes), 19 of which had significant correlation with PS and 9 of which had significant correlation with CBV (P < .05). Proangiogenic genes such as TNFRSF1A (PS = 0.53, P = .024), HIF1A (PS = 0.62, P = .0065), KDR (CBV = 0.60, P = .0084; PS = 0.59, P = .0097), TIE1 (CBV = 0.54, P = .022; PS = 0.49, P = .039), and TIE2/TEK (CBV = 0.58, P = .012) showed a significant positive correlation; whereas antiangiogenic genes such as VASH2 (PS = -0.72, P = .00011) showed a significant inverse correlation.
Our findings are provocative, with some of the proangiogenic genes showing a positive correlation and some of the antiangiogenic genes showing an inverse correlation with tumor perfusion parameters, suggesting a molecular basis for these imaging biomarkers; however, this should be confirmed in a larger patient population. |
doi_str_mv | 10.3174/ajnr.A2956 |
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Eighteen patients with WHO grade IV gliomas underwent pretreatment PCT and measurement of CBV and PS values from enhancing tumor. Tumor specimens were analyzed by TCGA by using Human Gene Expression Microarrays and were interrogated for correlation between CBV and PS estimates across the genome. We used the GO biologic process pathways for angiogenesis regulation to select genes of interest.
We observed expression levels for 92 angiogenesis-associated genes (332 probes), 19 of which had significant correlation with PS and 9 of which had significant correlation with CBV (P < .05). Proangiogenic genes such as TNFRSF1A (PS = 0.53, P = .024), HIF1A (PS = 0.62, P = .0065), KDR (CBV = 0.60, P = .0084; PS = 0.59, P = .0097), TIE1 (CBV = 0.54, P = .022; PS = 0.49, P = .039), and TIE2/TEK (CBV = 0.58, P = .012) showed a significant positive correlation; whereas antiangiogenic genes such as VASH2 (PS = -0.72, P = .00011) showed a significant inverse correlation.
Our findings are provocative, with some of the proangiogenic genes showing a positive correlation and some of the antiangiogenic genes showing an inverse correlation with tumor perfusion parameters, suggesting a molecular basis for these imaging biomarkers; however, this should be confirmed in a larger patient population.</description><identifier>ISSN: 0195-6108</identifier><identifier>EISSN: 1936-959X</identifier><identifier>DOI: 10.3174/ajnr.A2956</identifier><identifier>PMID: 22422183</identifier><identifier>CODEN: AAJNDL</identifier><language>eng</language><publisher>Oak Brook, IL: American Society of Neuroradiology</publisher><subject>Adult ; Aged ; Aged, 80 and over ; Angiogenic Proteins - metabolism ; Biological and medical sciences ; Brain ; Brain Neoplasms - diagnostic imaging ; Brain Neoplasms - metabolism ; Female ; Fundamental and applied biological sciences. Psychology ; Gene Expression Regulation, Neoplastic ; Glioblastoma ; Human ; Humans ; Investigative techniques, diagnostic techniques (general aspects) ; Learning. Memory ; Male ; Medical sciences ; Memory ; Middle Aged ; Neovascularization, Pathologic - diagnostic imaging ; Neovascularization, Pathologic - metabolism ; Nervous system ; Perfusion Imaging - methods ; Psychology. Psychoanalysis. Psychiatry ; Psychology. Psychophysiology ; Radiodiagnosis. Nmr imagery. Nmr spectrometry ; Statistics as Topic ; Tomography, X-Ray Computed - methods ; Young Adult</subject><ispartof>American journal of neuroradiology : AJNR, 2012-08, Vol.33 (7), p.1343-1348</ispartof><rights>2015 INIST-CNRS</rights><rights>2012 by American Journal of Neuroradiology 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c441t-b974d2009e8a4e25f843c37d289094eac7b7ffd4a62a30d732f103ba143c6e493</citedby><cites>FETCH-LOGICAL-c441t-b974d2009e8a4e25f843c37d289094eac7b7ffd4a62a30d732f103ba143c6e493</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7965523/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7965523/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=26259215$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22422183$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>JAIN, R</creatorcontrib><creatorcontrib>POISSON, L</creatorcontrib><creatorcontrib>NARANG, J</creatorcontrib><creatorcontrib>SCARPACE, L</creatorcontrib><creatorcontrib>ROSENBLUM, M. L</creatorcontrib><creatorcontrib>REMPEL, S</creatorcontrib><creatorcontrib>MIKKELSEN, T</creatorcontrib><title>Correlation of Perfusion Parameters with Genes Related to Angiogenesis Regulation in Glioblastoma: A Feasibility Study</title><title>American journal of neuroradiology : AJNR</title><addtitle>AJNR Am J Neuroradiol</addtitle><description>Integration of imaging and genomic data is critical for a better understanding of gliomas, particularly considering the increasing focus on the use of imaging biomarkers for patient survival and treatment response. The purpose of this study was to correlate CBV and PS measured by using PCT with the genes regulating angiogenesis in GBM.
Eighteen patients with WHO grade IV gliomas underwent pretreatment PCT and measurement of CBV and PS values from enhancing tumor. Tumor specimens were analyzed by TCGA by using Human Gene Expression Microarrays and were interrogated for correlation between CBV and PS estimates across the genome. We used the GO biologic process pathways for angiogenesis regulation to select genes of interest.
We observed expression levels for 92 angiogenesis-associated genes (332 probes), 19 of which had significant correlation with PS and 9 of which had significant correlation with CBV (P < .05). Proangiogenic genes such as TNFRSF1A (PS = 0.53, P = .024), HIF1A (PS = 0.62, P = .0065), KDR (CBV = 0.60, P = .0084; PS = 0.59, P = .0097), TIE1 (CBV = 0.54, P = .022; PS = 0.49, P = .039), and TIE2/TEK (CBV = 0.58, P = .012) showed a significant positive correlation; whereas antiangiogenic genes such as VASH2 (PS = -0.72, P = .00011) showed a significant inverse correlation.
Our findings are provocative, with some of the proangiogenic genes showing a positive correlation and some of the antiangiogenic genes showing an inverse correlation with tumor perfusion parameters, suggesting a molecular basis for these imaging biomarkers; however, this should be confirmed in a larger patient population.</description><subject>Adult</subject><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Angiogenic Proteins - metabolism</subject><subject>Biological and medical sciences</subject><subject>Brain</subject><subject>Brain Neoplasms - diagnostic imaging</subject><subject>Brain Neoplasms - metabolism</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene Expression Regulation, Neoplastic</subject><subject>Glioblastoma</subject><subject>Human</subject><subject>Humans</subject><subject>Investigative techniques, diagnostic techniques (general aspects)</subject><subject>Learning. Memory</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Memory</subject><subject>Middle Aged</subject><subject>Neovascularization, Pathologic - diagnostic imaging</subject><subject>Neovascularization, Pathologic - metabolism</subject><subject>Nervous system</subject><subject>Perfusion Imaging - methods</subject><subject>Psychology. Psychoanalysis. Psychiatry</subject><subject>Psychology. Psychophysiology</subject><subject>Radiodiagnosis. Nmr imagery. Nmr spectrometry</subject><subject>Statistics as Topic</subject><subject>Tomography, X-Ray Computed - methods</subject><subject>Young Adult</subject><issn>0195-6108</issn><issn>1936-959X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0V1rFDEUBuAgit1Wb_wBkhtBClPzOTPxQlgWuwoFix_gXTgzc7JNmZm0Saay_94Zu1a98irk5OHlhJeQF5ydSV6pN3A9xrO1MLp8RFbcyLIw2nx_TFaMG12UnNVH5Dila8aYNpV4So6EUELwWq7I3SbEiD1kH0YaHL3E6Ka0XC4hwoAZY6I_fL6iWxwx0c-LxY7mQNfjzofdMvXLfDcdUvxIt70PTQ8phwHe0jU9R0i-8b3Pe_olT93-GXnioE_4_HCekG_n779uPhQXn7YfN-uLolWK56IxleoEYwZrUCi0q5VsZdWJ2jCjENqqqZzrFJQCJOsqKRxnsgE-sxKVkSfk3X3uzdQM2LU45gi9vYl-gLi3Abz992X0V3YX7mxlSq2FnANeHwJiuJ0wZTv41GLfw4hhSpZrzUspFdf_p0zKshaMVzM9vadtDClFdA8bcWaXTu3Sqf3V6Yxf_v2HB_q7xBm8OgBILfQuwtj69MeVQhsxL_gTs4ysOg</recordid><startdate>20120801</startdate><enddate>20120801</enddate><creator>JAIN, R</creator><creator>POISSON, L</creator><creator>NARANG, J</creator><creator>SCARPACE, L</creator><creator>ROSENBLUM, M. 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L ; REMPEL, S ; MIKKELSEN, T</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c441t-b974d2009e8a4e25f843c37d289094eac7b7ffd4a62a30d732f103ba143c6e493</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Adult</topic><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Angiogenic Proteins - metabolism</topic><topic>Biological and medical sciences</topic><topic>Brain</topic><topic>Brain Neoplasms - diagnostic imaging</topic><topic>Brain Neoplasms - metabolism</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene Expression Regulation, Neoplastic</topic><topic>Glioblastoma</topic><topic>Human</topic><topic>Humans</topic><topic>Investigative techniques, diagnostic techniques (general aspects)</topic><topic>Learning. 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L</creatorcontrib><creatorcontrib>REMPEL, S</creatorcontrib><creatorcontrib>MIKKELSEN, T</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Neurosciences Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>American journal of neuroradiology : AJNR</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>JAIN, R</au><au>POISSON, L</au><au>NARANG, J</au><au>SCARPACE, L</au><au>ROSENBLUM, M. L</au><au>REMPEL, S</au><au>MIKKELSEN, T</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Correlation of Perfusion Parameters with Genes Related to Angiogenesis Regulation in Glioblastoma: A Feasibility Study</atitle><jtitle>American journal of neuroradiology : AJNR</jtitle><addtitle>AJNR Am J Neuroradiol</addtitle><date>2012-08-01</date><risdate>2012</risdate><volume>33</volume><issue>7</issue><spage>1343</spage><epage>1348</epage><pages>1343-1348</pages><issn>0195-6108</issn><eissn>1936-959X</eissn><coden>AAJNDL</coden><abstract>Integration of imaging and genomic data is critical for a better understanding of gliomas, particularly considering the increasing focus on the use of imaging biomarkers for patient survival and treatment response. The purpose of this study was to correlate CBV and PS measured by using PCT with the genes regulating angiogenesis in GBM.
Eighteen patients with WHO grade IV gliomas underwent pretreatment PCT and measurement of CBV and PS values from enhancing tumor. Tumor specimens were analyzed by TCGA by using Human Gene Expression Microarrays and were interrogated for correlation between CBV and PS estimates across the genome. We used the GO biologic process pathways for angiogenesis regulation to select genes of interest.
We observed expression levels for 92 angiogenesis-associated genes (332 probes), 19 of which had significant correlation with PS and 9 of which had significant correlation with CBV (P < .05). Proangiogenic genes such as TNFRSF1A (PS = 0.53, P = .024), HIF1A (PS = 0.62, P = .0065), KDR (CBV = 0.60, P = .0084; PS = 0.59, P = .0097), TIE1 (CBV = 0.54, P = .022; PS = 0.49, P = .039), and TIE2/TEK (CBV = 0.58, P = .012) showed a significant positive correlation; whereas antiangiogenic genes such as VASH2 (PS = -0.72, P = .00011) showed a significant inverse correlation.
Our findings are provocative, with some of the proangiogenic genes showing a positive correlation and some of the antiangiogenic genes showing an inverse correlation with tumor perfusion parameters, suggesting a molecular basis for these imaging biomarkers; however, this should be confirmed in a larger patient population.</abstract><cop>Oak Brook, IL</cop><pub>American Society of Neuroradiology</pub><pmid>22422183</pmid><doi>10.3174/ajnr.A2956</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adult Aged Aged, 80 and over Angiogenic Proteins - metabolism Biological and medical sciences Brain Brain Neoplasms - diagnostic imaging Brain Neoplasms - metabolism Female Fundamental and applied biological sciences. Psychology Gene Expression Regulation, Neoplastic Glioblastoma Human Humans Investigative techniques, diagnostic techniques (general aspects) Learning. Memory Male Medical sciences Memory Middle Aged Neovascularization, Pathologic - diagnostic imaging Neovascularization, Pathologic - metabolism Nervous system Perfusion Imaging - methods Psychology. Psychoanalysis. Psychiatry Psychology. Psychophysiology Radiodiagnosis. Nmr imagery. Nmr spectrometry Statistics as Topic Tomography, X-Ray Computed - methods Young Adult |
title | Correlation of Perfusion Parameters with Genes Related to Angiogenesis Regulation in Glioblastoma: A Feasibility Study |
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