The complete mitochondrial genome of Silurus grahami Regan, 1907 (Siluriformes: Siluridae), a native catfish in Fuxian Lake
In this study, the whole mitochondrial genome of Silurus grahami was reported to be 16,518 bp in length, including 13 protein-coding genes, two ribosomal RNAs, 22 transfer RNAs, and one control region. The phylogenetic analysis based on 13 protein-coding genes showed that S. grahami was sister to cl...
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| Veröffentlicht in: | Mitochondrial DNA. Part B. Resources 2021-03, Vol.6 (3), p.835-836 |
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| container_title | Mitochondrial DNA. Part B. Resources |
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| creator | Wu, Junjie Lei, Chunyun Zhao, Jingxia Jin, Fangpeng Gao, Haitao Fu, Shiwei Zhou, Rui Luo, Yongxin Leng, Yun Xue, Shaowei Zhang, Wenkui Li, Guanghua |
| description | In this study, the whole mitochondrial genome of Silurus grahami was reported to be 16,518 bp in length, including 13 protein-coding genes, two ribosomal RNAs, 22 transfer RNAs, and one control region. The phylogenetic analysis based on 13 protein-coding genes showed that S. grahami was sister to clade of S. meridionalis and S. lanzhouensis. A total of 81 bases differences were identified in COI barcoding region, which could be used for species identification in catfish. |
| doi_str_mv | 10.1080/23802359.2021.1884024 |
| format | Article |
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The phylogenetic analysis based on 13 protein-coding genes showed that S. grahami was sister to clade of S. meridionalis and S. lanzhouensis. A total of 81 bases differences were identified in COI barcoding region, which could be used for species identification in catfish.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2021.1884024</identifier><identifier>PMID: 33763596</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>DNA barcoding ; Genomes ; Mitochondria ; mitochondrial genome ; Mitogenome Announcement ; phylogenetic analysis ; Phylogeny ; Silurus grahami</subject><ispartof>Mitochondrial DNA. Part B. Resources, 2021-03, Vol.6 (3), p.835-836</ispartof><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2021</rights><rights>2021 The Author(s). 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A total of 81 bases differences were identified in COI barcoding region, which could be used for species identification in catfish.</description><subject>DNA barcoding</subject><subject>Genomes</subject><subject>Mitochondria</subject><subject>mitochondrial genome</subject><subject>Mitogenome Announcement</subject><subject>phylogenetic analysis</subject><subject>Phylogeny</subject><subject>Silurus grahami</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><sourceid>DOA</sourceid><recordid>eNp9ksFu1DAQhiMEolXpI4AscSlSd3HsxE44IFBFodJKSFDO1sQZ73pJ7K2dFCpeHqfZVi0HTrZm_vlmPP6z7GVOlzmt6FvGK8p4WS8ZZfkyr6qCsuJJdjjFF1Pi6YP7QXYc45ZSmgsuZS2fZwecS5Ey4jD7c7lBon2_63BA0tvB6413bbDQkTU63yPxhny33RjGSNYBNtBb8g3X4E5JXlNJTm6T1vjQY3w3S20L-OaUAHEw2OvUAAZj44ZYR87H3xYcWcFPfJE9M9BFPN6fR9mP80-XZ18Wq6-fL84-rha6FGxYVByNgIqCQGNYLZkQta51Iw2XjSg4ZxVFymhbQtli2ZgyZ7KVVaGFFFRQfpRdzNzWw1btgu0h3CgPVt0GfFgrCIPVHaqCYisNMBSmKgSTFYfC8EbmLddp1zKx3s-s3dj02Gp0Q4DuEfRxxtmNWvtrJeuyKLhIgJM9IPirEeOgehs1dh049GNUrKQlF0wU09yv_5Fu_RhcWlVSsZommuBJVc4qHXyMAc39MDlVk1vUnVvU5Ba1d0uqe_XwJfdVd95Igg-zwLrpc-GXD12rBrjpfDABnLZR8f_3-Aulic0U</recordid><startdate>20210311</startdate><enddate>20210311</enddate><creator>Wu, Junjie</creator><creator>Lei, Chunyun</creator><creator>Zhao, Jingxia</creator><creator>Jin, Fangpeng</creator><creator>Gao, Haitao</creator><creator>Fu, Shiwei</creator><creator>Zhou, Rui</creator><creator>Luo, Yongxin</creator><creator>Leng, Yun</creator><creator>Xue, Shaowei</creator><creator>Zhang, Wenkui</creator><creator>Li, Guanghua</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20210311</creationdate><title>The complete mitochondrial genome of Silurus grahami Regan, 1907 (Siluriformes: Siluridae), a native catfish in Fuxian Lake</title><author>Wu, Junjie ; Lei, Chunyun ; Zhao, Jingxia ; Jin, Fangpeng ; Gao, Haitao ; Fu, Shiwei ; Zhou, Rui ; Luo, Yongxin ; Leng, Yun ; Xue, Shaowei ; Zhang, Wenkui ; Li, Guanghua</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c562t-83ef6a80a6eff2972669c9cb7f37b6433280e020d5a5de5bf5127d784c6760603</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>DNA barcoding</topic><topic>Genomes</topic><topic>Mitochondria</topic><topic>mitochondrial genome</topic><topic>Mitogenome Announcement</topic><topic>phylogenetic analysis</topic><topic>Phylogeny</topic><topic>Silurus grahami</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wu, Junjie</creatorcontrib><creatorcontrib>Lei, Chunyun</creatorcontrib><creatorcontrib>Zhao, Jingxia</creatorcontrib><creatorcontrib>Jin, Fangpeng</creatorcontrib><creatorcontrib>Gao, Haitao</creatorcontrib><creatorcontrib>Fu, Shiwei</creatorcontrib><creatorcontrib>Zhou, Rui</creatorcontrib><creatorcontrib>Luo, Yongxin</creatorcontrib><creatorcontrib>Leng, Yun</creatorcontrib><creatorcontrib>Xue, Shaowei</creatorcontrib><creatorcontrib>Zhang, Wenkui</creatorcontrib><creatorcontrib>Li, Guanghua</creatorcontrib><collection>Taylor & Francis Open Access</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Technology Research Database</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Mitochondrial DNA. 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| ispartof | Mitochondrial DNA. Part B. Resources, 2021-03, Vol.6 (3), p.835-836 |
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| language | eng |
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| source | Taylor & Francis Open Access; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals; PubMed Central |
| subjects | DNA barcoding Genomes Mitochondria mitochondrial genome Mitogenome Announcement phylogenetic analysis Phylogeny Silurus grahami |
| title | The complete mitochondrial genome of Silurus grahami Regan, 1907 (Siluriformes: Siluridae), a native catfish in Fuxian Lake |
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