Abundant Chitinous Structures in Chilostomella (Foraminifera, Rhizaria) and Their Potential Functions

Benthic foraminifera, members of Rhizaria, inhabit a broad range of marine environments and are particularly common in hypoxic sediments. The biology of benthic foraminifera is key to understanding benthic ecosystems and relevant biogeochemical cycles, especially in hypoxic environments. Chilostomel...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:The Journal of eukaryotic microbiology 2021-01, Vol.68 (1), p.e12828-n/a
Hauptverfasser: Nomaki, Hidetaka, Chen, Chong, Oda, Kaya, Tsuchiya, Masashi, Tame, Akihiro, Uematsu, Katsuyuki, Isobe, Noriyuki
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page n/a
container_issue 1
container_start_page e12828
container_title The Journal of eukaryotic microbiology
container_volume 68
creator Nomaki, Hidetaka
Chen, Chong
Oda, Kaya
Tsuchiya, Masashi
Tame, Akihiro
Uematsu, Katsuyuki
Isobe, Noriyuki
description Benthic foraminifera, members of Rhizaria, inhabit a broad range of marine environments and are particularly common in hypoxic sediments. The biology of benthic foraminifera is key to understanding benthic ecosystems and relevant biogeochemical cycles, especially in hypoxic environments. Chilostomella is a foraminiferal genus commonly found in hypoxic deep‐sea sediments and has poorly understood ecological characteristics. For example, the carbon isotopic compositions of their lipids are substantially different from other co‐occurring genera, probably reflecting unique features of its metabolism. Here, we investigated the cytoplasmic and ultrastructural features of Chilostomella ovoidea from bathyal sediments of Sagami Bay, Japan, based on serial semi‐thin sections examined using an optical microscope followed by a three‐dimensional reconstruction, combined with TEM observations of ultra‐thin sections. Observations by TEM revealed the presence of abundant electron‐dense structures dividing the cytoplasm. Based on histochemical staining, these structures are shown to be composed of chitin. Our 3D reconstruction revealed chitinous structures in the final seven chambers. These exhibited a plate‐like morphology in the final chambers but became rolled up in earlier chambers (toward the proloculus). These chitinous, plate‐like structures may function to partition the cytoplasm in a chamber to increase the surface/volume ratio and/or act as a reactive site for some metabolic functions.
doi_str_mv 10.1111/jeu.12828
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7894498</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2456411739</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4438-fa8b0406cf57fbd9a92a609b47c26211bc561e8cb96a92514fe97b4f07247d73</originalsourceid><addsrcrecordid>eNp1kV9LHDEUxUNRqtU-9AtIwJcVOprMZJLMS0EWtypCi90-h0wm080yk2j-tOinN-OqVMH7ksu9Pw7n5gDwBaNjnOtkrdMxLnnJP4BdXNeoYATxrdwjSou6rMgO-BTCGiFMS4w_gp2qmnBGd4E-bZPtpI1wvjLRWJcC_BV9UjF5HaCx03xwIbpRD4OEs4XzcjTW9NrLr_B6Ze6lN_IIStvB5UobD3-6qG00coCLZFU0zoZ9sN3LIejPT-8eWC7OlvPz4urH94v56VWhCKl40UveIoKo6mvWt10jm1JS1LSEqXJy3qqaYs1V29C8qjHpdcNa0iNWEtaxag9828jepHbUnco2vBzEjTej9HfCSSNeb6xZiT_ur2C8IaThWWD2JODdbdIhitEENR1udf4ZUZKaEoxZ1WT08A26dsnbfF2mGM8UxZOjow2lvAvB6_7FDEZiyk7k7MRjdpk9-N_9C_kcVgZONsA_M-i795XE5dnvjeQD5eOkbQ</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2478411617</pqid></control><display><type>article</type><title>Abundant Chitinous Structures in Chilostomella (Foraminifera, Rhizaria) and Their Potential Functions</title><source>MEDLINE</source><source>Wiley Online Library Journals Frontfile Complete</source><creator>Nomaki, Hidetaka ; Chen, Chong ; Oda, Kaya ; Tsuchiya, Masashi ; Tame, Akihiro ; Uematsu, Katsuyuki ; Isobe, Noriyuki</creator><creatorcontrib>Nomaki, Hidetaka ; Chen, Chong ; Oda, Kaya ; Tsuchiya, Masashi ; Tame, Akihiro ; Uematsu, Katsuyuki ; Isobe, Noriyuki</creatorcontrib><description>Benthic foraminifera, members of Rhizaria, inhabit a broad range of marine environments and are particularly common in hypoxic sediments. The biology of benthic foraminifera is key to understanding benthic ecosystems and relevant biogeochemical cycles, especially in hypoxic environments. Chilostomella is a foraminiferal genus commonly found in hypoxic deep‐sea sediments and has poorly understood ecological characteristics. For example, the carbon isotopic compositions of their lipids are substantially different from other co‐occurring genera, probably reflecting unique features of its metabolism. Here, we investigated the cytoplasmic and ultrastructural features of Chilostomella ovoidea from bathyal sediments of Sagami Bay, Japan, based on serial semi‐thin sections examined using an optical microscope followed by a three‐dimensional reconstruction, combined with TEM observations of ultra‐thin sections. Observations by TEM revealed the presence of abundant electron‐dense structures dividing the cytoplasm. Based on histochemical staining, these structures are shown to be composed of chitin. Our 3D reconstruction revealed chitinous structures in the final seven chambers. These exhibited a plate‐like morphology in the final chambers but became rolled up in earlier chambers (toward the proloculus). These chitinous, plate‐like structures may function to partition the cytoplasm in a chamber to increase the surface/volume ratio and/or act as a reactive site for some metabolic functions.</description><identifier>ISSN: 1066-5234</identifier><identifier>EISSN: 1550-7408</identifier><identifier>DOI: 10.1111/jeu.12828</identifier><identifier>PMID: 33128276</identifier><language>eng</language><publisher>United States: Wiley Subscription Services, Inc</publisher><subject>3D reconstruction ; Abundance ; Benthos ; Biogeochemical cycle ; Biogeochemical cycles ; Biogeochemistry ; Biology ; Chilostomella ; Chitin ; Chitin - ultrastructure ; Cytoplasm ; Foraminifera ; Foraminifera - ultrastructure ; Hypoxia ; hypoxic adaptation ; Japan ; Lipids ; Marine environment ; Metabolism ; Microscopy, Electron, Transmission ; Original ; Sediments ; Structures ; ultrastructure</subject><ispartof>The Journal of eukaryotic microbiology, 2021-01, Vol.68 (1), p.e12828-n/a</ispartof><rights>2020 The Authors. published by Wiley Periodicals LLC on behalf of International Society of Protistologists</rights><rights>2020 The Authors. Journal of Eukaryotic Microbiology published by Wiley Periodicals LLC on behalf of International Society of Protistologists.</rights><rights>2020. This article is published under http://creativecommons.org/licenses/by-nc-nd/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4438-fa8b0406cf57fbd9a92a609b47c26211bc561e8cb96a92514fe97b4f07247d73</citedby><cites>FETCH-LOGICAL-c4438-fa8b0406cf57fbd9a92a609b47c26211bc561e8cb96a92514fe97b4f07247d73</cites><orcidid>0000-0001-8571-3373 ; 0000-0002-5035-4021 ; 0000-0002-7577-5076 ; 0000-0001-8179-4030</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fjeu.12828$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fjeu.12828$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>230,314,776,780,881,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33128276$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nomaki, Hidetaka</creatorcontrib><creatorcontrib>Chen, Chong</creatorcontrib><creatorcontrib>Oda, Kaya</creatorcontrib><creatorcontrib>Tsuchiya, Masashi</creatorcontrib><creatorcontrib>Tame, Akihiro</creatorcontrib><creatorcontrib>Uematsu, Katsuyuki</creatorcontrib><creatorcontrib>Isobe, Noriyuki</creatorcontrib><title>Abundant Chitinous Structures in Chilostomella (Foraminifera, Rhizaria) and Their Potential Functions</title><title>The Journal of eukaryotic microbiology</title><addtitle>J Eukaryot Microbiol</addtitle><description>Benthic foraminifera, members of Rhizaria, inhabit a broad range of marine environments and are particularly common in hypoxic sediments. The biology of benthic foraminifera is key to understanding benthic ecosystems and relevant biogeochemical cycles, especially in hypoxic environments. Chilostomella is a foraminiferal genus commonly found in hypoxic deep‐sea sediments and has poorly understood ecological characteristics. For example, the carbon isotopic compositions of their lipids are substantially different from other co‐occurring genera, probably reflecting unique features of its metabolism. Here, we investigated the cytoplasmic and ultrastructural features of Chilostomella ovoidea from bathyal sediments of Sagami Bay, Japan, based on serial semi‐thin sections examined using an optical microscope followed by a three‐dimensional reconstruction, combined with TEM observations of ultra‐thin sections. Observations by TEM revealed the presence of abundant electron‐dense structures dividing the cytoplasm. Based on histochemical staining, these structures are shown to be composed of chitin. Our 3D reconstruction revealed chitinous structures in the final seven chambers. These exhibited a plate‐like morphology in the final chambers but became rolled up in earlier chambers (toward the proloculus). These chitinous, plate‐like structures may function to partition the cytoplasm in a chamber to increase the surface/volume ratio and/or act as a reactive site for some metabolic functions.</description><subject>3D reconstruction</subject><subject>Abundance</subject><subject>Benthos</subject><subject>Biogeochemical cycle</subject><subject>Biogeochemical cycles</subject><subject>Biogeochemistry</subject><subject>Biology</subject><subject>Chilostomella</subject><subject>Chitin</subject><subject>Chitin - ultrastructure</subject><subject>Cytoplasm</subject><subject>Foraminifera</subject><subject>Foraminifera - ultrastructure</subject><subject>Hypoxia</subject><subject>hypoxic adaptation</subject><subject>Japan</subject><subject>Lipids</subject><subject>Marine environment</subject><subject>Metabolism</subject><subject>Microscopy, Electron, Transmission</subject><subject>Original</subject><subject>Sediments</subject><subject>Structures</subject><subject>ultrastructure</subject><issn>1066-5234</issn><issn>1550-7408</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>EIF</sourceid><recordid>eNp1kV9LHDEUxUNRqtU-9AtIwJcVOprMZJLMS0EWtypCi90-h0wm080yk2j-tOinN-OqVMH7ksu9Pw7n5gDwBaNjnOtkrdMxLnnJP4BdXNeoYATxrdwjSou6rMgO-BTCGiFMS4w_gp2qmnBGd4E-bZPtpI1wvjLRWJcC_BV9UjF5HaCx03xwIbpRD4OEs4XzcjTW9NrLr_B6Ze6lN_IIStvB5UobD3-6qG00coCLZFU0zoZ9sN3LIejPT-8eWC7OlvPz4urH94v56VWhCKl40UveIoKo6mvWt10jm1JS1LSEqXJy3qqaYs1V29C8qjHpdcNa0iNWEtaxag9828jepHbUnco2vBzEjTej9HfCSSNeb6xZiT_ur2C8IaThWWD2JODdbdIhitEENR1udf4ZUZKaEoxZ1WT08A26dsnbfF2mGM8UxZOjow2lvAvB6_7FDEZiyk7k7MRjdpk9-N_9C_kcVgZONsA_M-i795XE5dnvjeQD5eOkbQ</recordid><startdate>202101</startdate><enddate>202101</enddate><creator>Nomaki, Hidetaka</creator><creator>Chen, Chong</creator><creator>Oda, Kaya</creator><creator>Tsuchiya, Masashi</creator><creator>Tame, Akihiro</creator><creator>Uematsu, Katsuyuki</creator><creator>Isobe, Noriyuki</creator><general>Wiley Subscription Services, Inc</general><general>John Wiley and Sons Inc</general><scope>24P</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TN</scope><scope>8FD</scope><scope>F1W</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-8571-3373</orcidid><orcidid>https://orcid.org/0000-0002-5035-4021</orcidid><orcidid>https://orcid.org/0000-0002-7577-5076</orcidid><orcidid>https://orcid.org/0000-0001-8179-4030</orcidid></search><sort><creationdate>202101</creationdate><title>Abundant Chitinous Structures in Chilostomella (Foraminifera, Rhizaria) and Their Potential Functions</title><author>Nomaki, Hidetaka ; Chen, Chong ; Oda, Kaya ; Tsuchiya, Masashi ; Tame, Akihiro ; Uematsu, Katsuyuki ; Isobe, Noriyuki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4438-fa8b0406cf57fbd9a92a609b47c26211bc561e8cb96a92514fe97b4f07247d73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>3D reconstruction</topic><topic>Abundance</topic><topic>Benthos</topic><topic>Biogeochemical cycle</topic><topic>Biogeochemical cycles</topic><topic>Biogeochemistry</topic><topic>Biology</topic><topic>Chilostomella</topic><topic>Chitin</topic><topic>Chitin - ultrastructure</topic><topic>Cytoplasm</topic><topic>Foraminifera</topic><topic>Foraminifera - ultrastructure</topic><topic>Hypoxia</topic><topic>hypoxic adaptation</topic><topic>Japan</topic><topic>Lipids</topic><topic>Marine environment</topic><topic>Metabolism</topic><topic>Microscopy, Electron, Transmission</topic><topic>Original</topic><topic>Sediments</topic><topic>Structures</topic><topic>ultrastructure</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nomaki, Hidetaka</creatorcontrib><creatorcontrib>Chen, Chong</creatorcontrib><creatorcontrib>Oda, Kaya</creatorcontrib><creatorcontrib>Tsuchiya, Masashi</creatorcontrib><creatorcontrib>Tame, Akihiro</creatorcontrib><creatorcontrib>Uematsu, Katsuyuki</creatorcontrib><creatorcontrib>Isobe, Noriyuki</creatorcontrib><collection>Wiley-Blackwell Open Access Titles</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Oceanic Abstracts</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>The Journal of eukaryotic microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nomaki, Hidetaka</au><au>Chen, Chong</au><au>Oda, Kaya</au><au>Tsuchiya, Masashi</au><au>Tame, Akihiro</au><au>Uematsu, Katsuyuki</au><au>Isobe, Noriyuki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Abundant Chitinous Structures in Chilostomella (Foraminifera, Rhizaria) and Their Potential Functions</atitle><jtitle>The Journal of eukaryotic microbiology</jtitle><addtitle>J Eukaryot Microbiol</addtitle><date>2021-01</date><risdate>2021</risdate><volume>68</volume><issue>1</issue><spage>e12828</spage><epage>n/a</epage><pages>e12828-n/a</pages><issn>1066-5234</issn><eissn>1550-7408</eissn><abstract>Benthic foraminifera, members of Rhizaria, inhabit a broad range of marine environments and are particularly common in hypoxic sediments. The biology of benthic foraminifera is key to understanding benthic ecosystems and relevant biogeochemical cycles, especially in hypoxic environments. Chilostomella is a foraminiferal genus commonly found in hypoxic deep‐sea sediments and has poorly understood ecological characteristics. For example, the carbon isotopic compositions of their lipids are substantially different from other co‐occurring genera, probably reflecting unique features of its metabolism. Here, we investigated the cytoplasmic and ultrastructural features of Chilostomella ovoidea from bathyal sediments of Sagami Bay, Japan, based on serial semi‐thin sections examined using an optical microscope followed by a three‐dimensional reconstruction, combined with TEM observations of ultra‐thin sections. Observations by TEM revealed the presence of abundant electron‐dense structures dividing the cytoplasm. Based on histochemical staining, these structures are shown to be composed of chitin. Our 3D reconstruction revealed chitinous structures in the final seven chambers. These exhibited a plate‐like morphology in the final chambers but became rolled up in earlier chambers (toward the proloculus). These chitinous, plate‐like structures may function to partition the cytoplasm in a chamber to increase the surface/volume ratio and/or act as a reactive site for some metabolic functions.</abstract><cop>United States</cop><pub>Wiley Subscription Services, Inc</pub><pmid>33128276</pmid><doi>10.1111/jeu.12828</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0001-8571-3373</orcidid><orcidid>https://orcid.org/0000-0002-5035-4021</orcidid><orcidid>https://orcid.org/0000-0002-7577-5076</orcidid><orcidid>https://orcid.org/0000-0001-8179-4030</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1066-5234
ispartof The Journal of eukaryotic microbiology, 2021-01, Vol.68 (1), p.e12828-n/a
issn 1066-5234
1550-7408
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7894498
source MEDLINE; Wiley Online Library Journals Frontfile Complete
subjects 3D reconstruction
Abundance
Benthos
Biogeochemical cycle
Biogeochemical cycles
Biogeochemistry
Biology
Chilostomella
Chitin
Chitin - ultrastructure
Cytoplasm
Foraminifera
Foraminifera - ultrastructure
Hypoxia
hypoxic adaptation
Japan
Lipids
Marine environment
Metabolism
Microscopy, Electron, Transmission
Original
Sediments
Structures
ultrastructure
title Abundant Chitinous Structures in Chilostomella (Foraminifera, Rhizaria) and Their Potential Functions
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-06T00%3A11%3A12IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Abundant%20Chitinous%20Structures%20in%20Chilostomella%20(Foraminifera,%20Rhizaria)%20and%20Their%20Potential%20Functions&rft.jtitle=The%20Journal%20of%20eukaryotic%20microbiology&rft.au=Nomaki,%20Hidetaka&rft.date=2021-01&rft.volume=68&rft.issue=1&rft.spage=e12828&rft.epage=n/a&rft.pages=e12828-n/a&rft.issn=1066-5234&rft.eissn=1550-7408&rft_id=info:doi/10.1111/jeu.12828&rft_dat=%3Cproquest_pubme%3E2456411739%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2478411617&rft_id=info:pmid/33128276&rfr_iscdi=true