Whole-Genome Assembly of Yersinia pestis 231, the Russian Reference Strain for Testing Plague Vaccine Protection

We report the whole-genome sequence of subsp. bv. Antiqua strain 231 belonging to the 0.ANT3 phylogroup, the reference strain for testing plague vaccine protection in Russia. Genome sequencing was completed using the Oxford Nanopore MinION and Illumina platforms.

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Microbiology resource announcements 2021-02, Vol.10 (5)
Hauptverfasser: Kislichkina, Angelina A, Krasil'nikova, Ekaterina A, Platonov, Mikhail E, Skryabin, Yury P, Sizova, Angelika A, Solomentsev, Viktor I, Gapel'chenkova, Tat'yana V, Dentovskaya, Svetlana V, Bogun, Alexandr G, Anisimov, Andrey P
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page
container_issue 5
container_start_page
container_title Microbiology resource announcements
container_volume 10
creator Kislichkina, Angelina A
Krasil'nikova, Ekaterina A
Platonov, Mikhail E
Skryabin, Yury P
Sizova, Angelika A
Solomentsev, Viktor I
Gapel'chenkova, Tat'yana V
Dentovskaya, Svetlana V
Bogun, Alexandr G
Anisimov, Andrey P
description We report the whole-genome sequence of subsp. bv. Antiqua strain 231 belonging to the 0.ANT3 phylogroup, the reference strain for testing plague vaccine protection in Russia. Genome sequencing was completed using the Oxford Nanopore MinION and Illumina platforms.
doi_str_mv 10.1128/MRA.01373-20
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7862956</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2487160482</sourcerecordid><originalsourceid>FETCH-LOGICAL-a455t-71203e04fa195198a6855a3a52fc7a980054e7cdf4f9c1b78dc4e6b4cd65a71e3</originalsourceid><addsrcrecordid>eNqFkc1r3DAQxUVpaUKaW89FxxbiVB-WJV8KS2jTQkLDNv06iVntaFfBljaSXch_Xyebhs0h9DQD8-PNvHmEvObsmHNh3p_PZ8eMSy0rwZ6RfaF0U7HW_Hq-0--Rw1KuGGOC1aZt5EuyJ6WqudFmn2x-rlOH1SnG1COdlYL9oruhydPfmEuIAegGyxAKFZIf0WGNdD6WEiDSOXrMGB3Sb0OGEKlPmV7ewnFFLzpYjUh_gHMhIr3IaUA3hBRfkRceuoKH9_WAfP_08fLkc3X29fTLyeysglqpodJcMIms9sBbxVsDjVEKJCjhnYbWMKZq1G7pa986vtBm6WpsFrVbNgo0R3lAPmx1N-Oix6XDOB3Z2U0OPeQbmyDYx5MY1naV_lhtGtGqZhJ4ey-Q0_U42bJ9KA67DiKmsVhRG82b6aViQo-2qMuplIz-YQ1n9jYn22ewdznZydb_8SnWXfzdFofSC3uVxhynxz3Fvtl1_SD8L3D5Fz-iqhA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2487160482</pqid></control><display><type>article</type><title>Whole-Genome Assembly of Yersinia pestis 231, the Russian Reference Strain for Testing Plague Vaccine Protection</title><source>PubMed Central</source><creator>Kislichkina, Angelina A ; Krasil'nikova, Ekaterina A ; Platonov, Mikhail E ; Skryabin, Yury P ; Sizova, Angelika A ; Solomentsev, Viktor I ; Gapel'chenkova, Tat'yana V ; Dentovskaya, Svetlana V ; Bogun, Alexandr G ; Anisimov, Andrey P</creator><contributor>Cuomo, Christina A ; Cuomo, Christina A.</contributor><creatorcontrib>Kislichkina, Angelina A ; Krasil'nikova, Ekaterina A ; Platonov, Mikhail E ; Skryabin, Yury P ; Sizova, Angelika A ; Solomentsev, Viktor I ; Gapel'chenkova, Tat'yana V ; Dentovskaya, Svetlana V ; Bogun, Alexandr G ; Anisimov, Andrey P ; Cuomo, Christina A ; Cuomo, Christina A.</creatorcontrib><description>We report the whole-genome sequence of subsp. bv. Antiqua strain 231 belonging to the 0.ANT3 phylogroup, the reference strain for testing plague vaccine protection in Russia. Genome sequencing was completed using the Oxford Nanopore MinION and Illumina platforms.</description><identifier>ISSN: 2576-098X</identifier><identifier>EISSN: 2576-098X</identifier><identifier>DOI: 10.1128/MRA.01373-20</identifier><identifier>PMID: 33541878</identifier><language>eng</language><publisher>United States: American Society for Microbiology</publisher><subject>Genome Sequences</subject><ispartof>Microbiology resource announcements, 2021-02, Vol.10 (5)</ispartof><rights>Copyright © 2021 Kislichkina et al.</rights><rights>Copyright © 2021 Kislichkina et al. 2021 Kislichkina et al.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a455t-71203e04fa195198a6855a3a52fc7a980054e7cdf4f9c1b78dc4e6b4cd65a71e3</citedby><cites>FETCH-LOGICAL-a455t-71203e04fa195198a6855a3a52fc7a980054e7cdf4f9c1b78dc4e6b4cd65a71e3</cites><orcidid>0000-0001-8389-2494 ; 0000-0002-5499-7999</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7862956/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7862956/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33541878$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Cuomo, Christina A</contributor><contributor>Cuomo, Christina A.</contributor><creatorcontrib>Kislichkina, Angelina A</creatorcontrib><creatorcontrib>Krasil'nikova, Ekaterina A</creatorcontrib><creatorcontrib>Platonov, Mikhail E</creatorcontrib><creatorcontrib>Skryabin, Yury P</creatorcontrib><creatorcontrib>Sizova, Angelika A</creatorcontrib><creatorcontrib>Solomentsev, Viktor I</creatorcontrib><creatorcontrib>Gapel'chenkova, Tat'yana V</creatorcontrib><creatorcontrib>Dentovskaya, Svetlana V</creatorcontrib><creatorcontrib>Bogun, Alexandr G</creatorcontrib><creatorcontrib>Anisimov, Andrey P</creatorcontrib><title>Whole-Genome Assembly of Yersinia pestis 231, the Russian Reference Strain for Testing Plague Vaccine Protection</title><title>Microbiology resource announcements</title><addtitle>Microbiol Resour Announc</addtitle><addtitle>Microbiol Resour Announc</addtitle><description>We report the whole-genome sequence of subsp. bv. Antiqua strain 231 belonging to the 0.ANT3 phylogroup, the reference strain for testing plague vaccine protection in Russia. Genome sequencing was completed using the Oxford Nanopore MinION and Illumina platforms.</description><subject>Genome Sequences</subject><issn>2576-098X</issn><issn>2576-098X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNqFkc1r3DAQxUVpaUKaW89FxxbiVB-WJV8KS2jTQkLDNv06iVntaFfBljaSXch_Xyebhs0h9DQD8-PNvHmEvObsmHNh3p_PZ8eMSy0rwZ6RfaF0U7HW_Hq-0--Rw1KuGGOC1aZt5EuyJ6WqudFmn2x-rlOH1SnG1COdlYL9oruhydPfmEuIAegGyxAKFZIf0WGNdD6WEiDSOXrMGB3Sb0OGEKlPmV7ewnFFLzpYjUh_gHMhIr3IaUA3hBRfkRceuoKH9_WAfP_08fLkc3X29fTLyeysglqpodJcMIms9sBbxVsDjVEKJCjhnYbWMKZq1G7pa986vtBm6WpsFrVbNgo0R3lAPmx1N-Oix6XDOB3Z2U0OPeQbmyDYx5MY1naV_lhtGtGqZhJ4ey-Q0_U42bJ9KA67DiKmsVhRG82b6aViQo-2qMuplIz-YQ1n9jYn22ewdznZydb_8SnWXfzdFofSC3uVxhynxz3Fvtl1_SD8L3D5Fz-iqhA</recordid><startdate>20210204</startdate><enddate>20210204</enddate><creator>Kislichkina, Angelina A</creator><creator>Krasil'nikova, Ekaterina A</creator><creator>Platonov, Mikhail E</creator><creator>Skryabin, Yury P</creator><creator>Sizova, Angelika A</creator><creator>Solomentsev, Viktor I</creator><creator>Gapel'chenkova, Tat'yana V</creator><creator>Dentovskaya, Svetlana V</creator><creator>Bogun, Alexandr G</creator><creator>Anisimov, Andrey P</creator><general>American Society for Microbiology</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-8389-2494</orcidid><orcidid>https://orcid.org/0000-0002-5499-7999</orcidid></search><sort><creationdate>20210204</creationdate><title>Whole-Genome Assembly of Yersinia pestis 231, the Russian Reference Strain for Testing Plague Vaccine Protection</title><author>Kislichkina, Angelina A ; Krasil'nikova, Ekaterina A ; Platonov, Mikhail E ; Skryabin, Yury P ; Sizova, Angelika A ; Solomentsev, Viktor I ; Gapel'chenkova, Tat'yana V ; Dentovskaya, Svetlana V ; Bogun, Alexandr G ; Anisimov, Andrey P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a455t-71203e04fa195198a6855a3a52fc7a980054e7cdf4f9c1b78dc4e6b4cd65a71e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Genome Sequences</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kislichkina, Angelina A</creatorcontrib><creatorcontrib>Krasil'nikova, Ekaterina A</creatorcontrib><creatorcontrib>Platonov, Mikhail E</creatorcontrib><creatorcontrib>Skryabin, Yury P</creatorcontrib><creatorcontrib>Sizova, Angelika A</creatorcontrib><creatorcontrib>Solomentsev, Viktor I</creatorcontrib><creatorcontrib>Gapel'chenkova, Tat'yana V</creatorcontrib><creatorcontrib>Dentovskaya, Svetlana V</creatorcontrib><creatorcontrib>Bogun, Alexandr G</creatorcontrib><creatorcontrib>Anisimov, Andrey P</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Microbiology resource announcements</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kislichkina, Angelina A</au><au>Krasil'nikova, Ekaterina A</au><au>Platonov, Mikhail E</au><au>Skryabin, Yury P</au><au>Sizova, Angelika A</au><au>Solomentsev, Viktor I</au><au>Gapel'chenkova, Tat'yana V</au><au>Dentovskaya, Svetlana V</au><au>Bogun, Alexandr G</au><au>Anisimov, Andrey P</au><au>Cuomo, Christina A</au><au>Cuomo, Christina A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Whole-Genome Assembly of Yersinia pestis 231, the Russian Reference Strain for Testing Plague Vaccine Protection</atitle><jtitle>Microbiology resource announcements</jtitle><stitle>Microbiol Resour Announc</stitle><addtitle>Microbiol Resour Announc</addtitle><date>2021-02-04</date><risdate>2021</risdate><volume>10</volume><issue>5</issue><issn>2576-098X</issn><eissn>2576-098X</eissn><abstract>We report the whole-genome sequence of subsp. bv. Antiqua strain 231 belonging to the 0.ANT3 phylogroup, the reference strain for testing plague vaccine protection in Russia. Genome sequencing was completed using the Oxford Nanopore MinION and Illumina platforms.</abstract><cop>United States</cop><pub>American Society for Microbiology</pub><pmid>33541878</pmid><doi>10.1128/MRA.01373-20</doi><tpages>2</tpages><orcidid>https://orcid.org/0000-0001-8389-2494</orcidid><orcidid>https://orcid.org/0000-0002-5499-7999</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2576-098X
ispartof Microbiology resource announcements, 2021-02, Vol.10 (5)
issn 2576-098X
2576-098X
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7862956
source PubMed Central
subjects Genome Sequences
title Whole-Genome Assembly of Yersinia pestis 231, the Russian Reference Strain for Testing Plague Vaccine Protection
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-30T14%3A14%3A03IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Whole-Genome%20Assembly%20of%20Yersinia%20pestis%20231,%20the%20Russian%20Reference%20Strain%20for%20Testing%20Plague%20Vaccine%20Protection&rft.jtitle=Microbiology%20resource%20announcements&rft.au=Kislichkina,%20Angelina%20A&rft.date=2021-02-04&rft.volume=10&rft.issue=5&rft.issn=2576-098X&rft.eissn=2576-098X&rft_id=info:doi/10.1128/MRA.01373-20&rft_dat=%3Cproquest_pubme%3E2487160482%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2487160482&rft_id=info:pmid/33541878&rfr_iscdi=true