A dyadic approach to the delineation of diagnostic entities in clinical genomics

The delineation of disease entities is complex, yet recent advances in the molecular characterization of diseases provide opportunities to designate diseases in a biologically valid manner. Here, we have formalized an approach to the delineation of Mendelian genetic disorders that encompasses two di...

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Veröffentlicht in:American journal of human genetics 2021-01, Vol.108 (1), p.8-15
Hauptverfasser: Biesecker, Leslie G., Adam, Margaret P., Alkuraya, Fowzan S., Amemiya, Anne R., Bamshad, Michael J., Beck, Anita E., Bennett, James T., Bird, Lynne M., Carey, John C., Chung, Brian, Clark, Robin D., Cox, Timothy C., Curry, Cynthia, Dinulos, Mary Beth Palko, Dobyns, William B., Giampietro, Philip F., Girisha, Katta M., Glass, Ian A., Graham, John M., Gripp, Karen W., Haldeman-Englert, Chad R., Hall, Bryan D., Innes, A. Micheil, Kalish, Jennifer M., Keppler-Noreuil, Kim M., Kosaki, Kenjiro, Kozel, Beth A., Mirzaa, Ghayda M., Mulvihill, John J., Nowaczyk, Malgorzata J.M., Pagon, Roberta A., Retterer, Kyle, Rope, Alan F., Sanchez-Lara, Pedro A., Seaver, Laurie H., Shieh, Joseph T., Slavotinek, Anne M., Sobering, Andrew K., Stevens, Cathy A., Stevenson, David A., Tan, Tiong Yang, Tan, Wen-Hann, Tsai, Anne C., Weaver, David D., Williams, Marc S., Zackai, Elaine, Zarate, Yuri A.
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container_issue 1
container_start_page 8
container_title American journal of human genetics
container_volume 108
creator Biesecker, Leslie G.
Adam, Margaret P.
Alkuraya, Fowzan S.
Amemiya, Anne R.
Bamshad, Michael J.
Beck, Anita E.
Bennett, James T.
Bird, Lynne M.
Carey, John C.
Chung, Brian
Clark, Robin D.
Cox, Timothy C.
Curry, Cynthia
Dinulos, Mary Beth Palko
Dobyns, William B.
Giampietro, Philip F.
Girisha, Katta M.
Glass, Ian A.
Graham, John M.
Gripp, Karen W.
Haldeman-Englert, Chad R.
Hall, Bryan D.
Innes, A. Micheil
Kalish, Jennifer M.
Keppler-Noreuil, Kim M.
Kosaki, Kenjiro
Kozel, Beth A.
Mirzaa, Ghayda M.
Mulvihill, John J.
Nowaczyk, Malgorzata J.M.
Pagon, Roberta A.
Retterer, Kyle
Rope, Alan F.
Sanchez-Lara, Pedro A.
Seaver, Laurie H.
Shieh, Joseph T.
Slavotinek, Anne M.
Sobering, Andrew K.
Stevens, Cathy A.
Stevenson, David A.
Tan, Tiong Yang
Tan, Wen-Hann
Tsai, Anne C.
Weaver, David D.
Williams, Marc S.
Zackai, Elaine
Zarate, Yuri A.
description The delineation of disease entities is complex, yet recent advances in the molecular characterization of diseases provide opportunities to designate diseases in a biologically valid manner. Here, we have formalized an approach to the delineation of Mendelian genetic disorders that encompasses two distinct but inter-related concepts: (1) the gene that is mutated and (2) the phenotypic descriptor, preferably a recognizably distinct phenotype. We assert that only by a combinatorial or dyadic approach taking both of these attributes into account can a unitary, distinct genetic disorder be designated. We propose that all Mendelian disorders should be designated as “GENE-related phenotype descriptor” (e.g., “CFTR-related cystic fibrosis”). This approach to delineating and naming disorders reconciles the complexity of gene-to-phenotype relationships in a simple and clear manner yet communicates the complexity and nuance of these relationships. The delineation of disease entities is complex, yet recent advances in the molecular characterization of diseases provide opportunities to designate diseases in a biologically valid manner. Here, we have formalized an approach to the delineation of Mendelian genetic disorders that encompasses two distinct but inter-related concepts: (1) the gene that is mutated and (2) the phenotypic descriptor, preferably a recognizably distinct phenotype. We assert that only by a combinatorial or dyadic approach taking both of these attributes into account can a unitary, distinct genetic disorder be designated. We propose that all Mendelian disorders should be designated as “GENE-related phenotype descriptor” (e.g., “CFTR-related cystic fibrosis”). This approach to delineating and naming disorders reconciles the complexity of gene-to-phenotype relationships in a simple and clear manner yet communicates the complexity and nuance of these relationships.
doi_str_mv 10.1016/j.ajhg.2020.11.013
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We assert that only by a combinatorial or dyadic approach taking both of these attributes into account can a unitary, distinct genetic disorder be designated. We propose that all Mendelian disorders should be designated as “GENE-related phenotype descriptor” (e.g., “CFTR-related cystic fibrosis”). This approach to delineating and naming disorders reconciles the complexity of gene-to-phenotype relationships in a simple and clear manner yet communicates the complexity and nuance of these relationships. The delineation of disease entities is complex, yet recent advances in the molecular characterization of diseases provide opportunities to designate diseases in a biologically valid manner. Here, we have formalized an approach to the delineation of Mendelian genetic disorders that encompasses two distinct but inter-related concepts: (1) the gene that is mutated and (2) the phenotypic descriptor, preferably a recognizably distinct phenotype. We assert that only by a combinatorial or dyadic approach taking both of these attributes into account can a unitary, distinct genetic disorder be designated. We propose that all Mendelian disorders should be designated as “GENE-related phenotype descriptor” (e.g., “CFTR-related cystic fibrosis”). 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Here, we have formalized an approach to the delineation of Mendelian genetic disorders that encompasses two distinct but inter-related concepts: (1) the gene that is mutated and (2) the phenotypic descriptor, preferably a recognizably distinct phenotype. We assert that only by a combinatorial or dyadic approach taking both of these attributes into account can a unitary, distinct genetic disorder be designated. We propose that all Mendelian disorders should be designated as “GENE-related phenotype descriptor” (e.g., “CFTR-related cystic fibrosis”). This approach to delineating and naming disorders reconciles the complexity of gene-to-phenotype relationships in a simple and clear manner yet communicates the complexity and nuance of these relationships.</description><subject>Cystic Fibrosis - diagnosis</subject><subject>Cystic Fibrosis - genetics</subject><subject>Cystic Fibrosis Transmembrane Conductance Regulator - genetics</subject><subject>Genetic Diseases, Inborn - diagnosis</subject><subject>Genetic Diseases, Inborn - genetics</subject><subject>Genomics - methods</subject><subject>Genotype</subject><subject>Humans</subject><subject>Mutation - genetics</subject><subject>Phenotype</subject><issn>0002-9297</issn><issn>1537-6605</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kU1rGzEQhkVoSZy0f6CHomMv6-hjJa0gFELIFwTSQ3sWsjRry6wlR5ID-feRcRLaSy8zMPPMO8O8CH2jZE4JlefruV2vlnNGWCvQOaH8CM2o4KqTkohPaEYIYZ1mWp2g01LWhFA6EH6MTjjvqRoGPUO_LrF_sT44bLfbnKxb4ZpwXQH2MIUItoYUcRqxD3YZU6mNhFhDDVBwiNg1KDg74SXEtAmufEGfRzsV-PqWz9Cfm-vfV3fdw-Pt_dXlQ-cEo7VzxHFgYliMRGmlW2BKMMUXPQUNaiG0V1KzQUnWD5pLMQpqmQWvnByYsvwM_TzobneLDXjXjsp2MtscNja_mGSD-bcTw8os07NRAyOS0Sbw400gp6cdlGo2oTiYJhsh7YphvZJC9r1iDWUH1OVUSobxYw0lZm-FWZu9FWZvhaHUNCva0Pe_D_wYef99Ay4OALQ3PQfIprgA0YEPGVw1PoX_6b8CiI6acQ</recordid><startdate>20210107</startdate><enddate>20210107</enddate><creator>Biesecker, Leslie G.</creator><creator>Adam, Margaret P.</creator><creator>Alkuraya, Fowzan S.</creator><creator>Amemiya, Anne R.</creator><creator>Bamshad, Michael J.</creator><creator>Beck, Anita E.</creator><creator>Bennett, James T.</creator><creator>Bird, Lynne M.</creator><creator>Carey, John C.</creator><creator>Chung, Brian</creator><creator>Clark, Robin D.</creator><creator>Cox, Timothy C.</creator><creator>Curry, Cynthia</creator><creator>Dinulos, Mary Beth Palko</creator><creator>Dobyns, William B.</creator><creator>Giampietro, Philip F.</creator><creator>Girisha, Katta M.</creator><creator>Glass, Ian A.</creator><creator>Graham, John M.</creator><creator>Gripp, Karen W.</creator><creator>Haldeman-Englert, Chad R.</creator><creator>Hall, Bryan D.</creator><creator>Innes, A. 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Micheil ; Kalish, Jennifer M. ; Keppler-Noreuil, Kim M. ; Kosaki, Kenjiro ; Kozel, Beth A. ; Mirzaa, Ghayda M. ; Mulvihill, John J. ; Nowaczyk, Malgorzata J.M. ; Pagon, Roberta A. ; Retterer, Kyle ; Rope, Alan F. ; Sanchez-Lara, Pedro A. ; Seaver, Laurie H. ; Shieh, Joseph T. ; Slavotinek, Anne M. ; Sobering, Andrew K. ; Stevens, Cathy A. ; Stevenson, David A. ; Tan, Tiong Yang ; Tan, Wen-Hann ; Tsai, Anne C. ; Weaver, David D. ; Williams, Marc S. ; Zackai, Elaine ; Zarate, Yuri A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c521t-c0c3e258bf07979079275273b41e9e7b59d76928762489365f51a2aed7c6827a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Cystic Fibrosis - diagnosis</topic><topic>Cystic Fibrosis - genetics</topic><topic>Cystic Fibrosis Transmembrane Conductance Regulator - genetics</topic><topic>Genetic Diseases, Inborn - diagnosis</topic><topic>Genetic Diseases, Inborn - genetics</topic><topic>Genomics - methods</topic><topic>Genotype</topic><topic>Humans</topic><topic>Mutation - genetics</topic><topic>Phenotype</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Biesecker, Leslie G.</creatorcontrib><creatorcontrib>Adam, Margaret P.</creatorcontrib><creatorcontrib>Alkuraya, Fowzan S.</creatorcontrib><creatorcontrib>Amemiya, Anne R.</creatorcontrib><creatorcontrib>Bamshad, Michael J.</creatorcontrib><creatorcontrib>Beck, Anita E.</creatorcontrib><creatorcontrib>Bennett, James T.</creatorcontrib><creatorcontrib>Bird, Lynne M.</creatorcontrib><creatorcontrib>Carey, John C.</creatorcontrib><creatorcontrib>Chung, Brian</creatorcontrib><creatorcontrib>Clark, Robin D.</creatorcontrib><creatorcontrib>Cox, Timothy C.</creatorcontrib><creatorcontrib>Curry, Cynthia</creatorcontrib><creatorcontrib>Dinulos, Mary Beth Palko</creatorcontrib><creatorcontrib>Dobyns, William B.</creatorcontrib><creatorcontrib>Giampietro, Philip F.</creatorcontrib><creatorcontrib>Girisha, Katta M.</creatorcontrib><creatorcontrib>Glass, Ian A.</creatorcontrib><creatorcontrib>Graham, John M.</creatorcontrib><creatorcontrib>Gripp, Karen W.</creatorcontrib><creatorcontrib>Haldeman-Englert, Chad R.</creatorcontrib><creatorcontrib>Hall, Bryan D.</creatorcontrib><creatorcontrib>Innes, A. 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Micheil</au><au>Kalish, Jennifer M.</au><au>Keppler-Noreuil, Kim M.</au><au>Kosaki, Kenjiro</au><au>Kozel, Beth A.</au><au>Mirzaa, Ghayda M.</au><au>Mulvihill, John J.</au><au>Nowaczyk, Malgorzata J.M.</au><au>Pagon, Roberta A.</au><au>Retterer, Kyle</au><au>Rope, Alan F.</au><au>Sanchez-Lara, Pedro A.</au><au>Seaver, Laurie H.</au><au>Shieh, Joseph T.</au><au>Slavotinek, Anne M.</au><au>Sobering, Andrew K.</au><au>Stevens, Cathy A.</au><au>Stevenson, David A.</au><au>Tan, Tiong Yang</au><au>Tan, Wen-Hann</au><au>Tsai, Anne C.</au><au>Weaver, David D.</au><au>Williams, Marc S.</au><au>Zackai, Elaine</au><au>Zarate, Yuri A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A dyadic approach to the delineation of diagnostic entities in clinical genomics</atitle><jtitle>American journal of human genetics</jtitle><addtitle>Am J Hum Genet</addtitle><date>2021-01-07</date><risdate>2021</risdate><volume>108</volume><issue>1</issue><spage>8</spage><epage>15</epage><pages>8-15</pages><issn>0002-9297</issn><eissn>1537-6605</eissn><abstract>The delineation of disease entities is complex, yet recent advances in the molecular characterization of diseases provide opportunities to designate diseases in a biologically valid manner. Here, we have formalized an approach to the delineation of Mendelian genetic disorders that encompasses two distinct but inter-related concepts: (1) the gene that is mutated and (2) the phenotypic descriptor, preferably a recognizably distinct phenotype. We assert that only by a combinatorial or dyadic approach taking both of these attributes into account can a unitary, distinct genetic disorder be designated. We propose that all Mendelian disorders should be designated as “GENE-related phenotype descriptor” (e.g., “CFTR-related cystic fibrosis”). This approach to delineating and naming disorders reconciles the complexity of gene-to-phenotype relationships in a simple and clear manner yet communicates the complexity and nuance of these relationships. The delineation of disease entities is complex, yet recent advances in the molecular characterization of diseases provide opportunities to designate diseases in a biologically valid manner. Here, we have formalized an approach to the delineation of Mendelian genetic disorders that encompasses two distinct but inter-related concepts: (1) the gene that is mutated and (2) the phenotypic descriptor, preferably a recognizably distinct phenotype. We assert that only by a combinatorial or dyadic approach taking both of these attributes into account can a unitary, distinct genetic disorder be designated. We propose that all Mendelian disorders should be designated as “GENE-related phenotype descriptor” (e.g., “CFTR-related cystic fibrosis”). This approach to delineating and naming disorders reconciles the complexity of gene-to-phenotype relationships in a simple and clear manner yet communicates the complexity and nuance of these relationships.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>33417889</pmid><doi>10.1016/j.ajhg.2020.11.013</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record>
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subjects Cystic Fibrosis - diagnosis
Cystic Fibrosis - genetics
Cystic Fibrosis Transmembrane Conductance Regulator - genetics
Genetic Diseases, Inborn - diagnosis
Genetic Diseases, Inborn - genetics
Genomics - methods
Genotype
Humans
Mutation - genetics
Phenotype
title A dyadic approach to the delineation of diagnostic entities in clinical genomics
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