Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding
Crop populations derived from experimental crosses enable the genetic dissection of complex traits and support modern plant breeding. Among these, multi-parent populations now play a central role. By mixing and recombining the genomes of multiple founders, multi-parent populations combine many commo...
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| Veröffentlicht in: | Heredity 2020-12, Vol.125 (6), p.396-416 |
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| creator | Scott, Michael F Ladejobi, Olufunmilayo Amer, Samer Bentley, Alison R Biernaskie, Jay Boden, Scott A Clark, Matt Dell'Acqua, Matteo Dixon, Laura E Filippi, Carla V Fradgley, Nick Gardner, Keith A Mackay, Ian J O'Sullivan, Donal Percival-Alwyn, Lawrence Roorkiwal, Manish Singh, Rakesh Kumar Thudi, Mahendar Varshney, Rajeev Kumar Venturini, Luca Whan, Alex Cockram, James Mott, Richard |
| description | Crop populations derived from experimental crosses enable the genetic dissection of complex traits and support modern plant breeding. Among these, multi-parent populations now play a central role. By mixing and recombining the genomes of multiple founders, multi-parent populations combine many commonly sought beneficial properties of genetic mapping populations. For example, they have high power and resolution for mapping quantitative trait loci, high genetic diversity and minimal population structure. Many multi-parent populations have been constructed in crop species, and their inbred germplasm and associated phenotypic and genotypic data serve as enduring resources. Their utility has grown from being a tool for mapping quantitative trait loci to a means of providing germplasm for breeding programmes. Genomics approaches, including de novo genome assemblies and gene annotations for the population founders, have allowed the imputation of rich sequence information into the descendent population, expanding the breadth of research and breeding applications of multi-parent populations. Here, we report recent successes from crop multi-parent populations in crops. We also propose an ideal genotypic, phenotypic and germplasm 'package' that multi-parent populations should feature to optimise their use as powerful community resources for crop research, development and breeding. |
| doi_str_mv | 10.1038/s41437-020-0336-6 |
| format | Article |
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Among these, multi-parent populations now play a central role. By mixing and recombining the genomes of multiple founders, multi-parent populations combine many commonly sought beneficial properties of genetic mapping populations. For example, they have high power and resolution for mapping quantitative trait loci, high genetic diversity and minimal population structure. Many multi-parent populations have been constructed in crop species, and their inbred germplasm and associated phenotypic and genotypic data serve as enduring resources. Their utility has grown from being a tool for mapping quantitative trait loci to a means of providing germplasm for breeding programmes. Genomics approaches, including de novo genome assemblies and gene annotations for the population founders, have allowed the imputation of rich sequence information into the descendent population, expanding the breadth of research and breeding applications of multi-parent populations. 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| fulltext | fulltext |
| identifier | ISSN: 0018-067X |
| ispartof | Heredity, 2020-12, Vol.125 (6), p.396-416 |
| issn | 0018-067X 1365-2540 |
| language | eng |
| recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7784848 |
| source | MEDLINE; Springer Nature - Complete Springer Journals; Nature Journals Online; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central |
| subjects | Annotations Chromosome Mapping Crops Crops, Agricultural - genetics Gene mapping Genetic diversity Genome, Plant Genomes Genomics Germplasm Inbreeding Plant Breeding Population genetics Population structure Populations Quantitative Trait Loci Review |
| title | Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding |
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