Complete mitochondrial genome of Holothuria leucospilata (Holothuroidea, Holothuriidae) and phylogenetic analysis
The complete Holothuria leucospilata mitochondrial genome was determined and analyzed in this work. It had a circular mapping molecular with a total length of 15,904 bp and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and 1 putative control region. Phylogenetic analysis showed tha...
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| Veröffentlicht in: | Mitochondrial DNA. Part B. Resources 2019-07, Vol.4 (2), p.2751-2752 |
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| container_title | Mitochondrial DNA. Part B. Resources |
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| creator | Yang, Qiuhua Lin, Qi Wu, Jianshao Tran, Ngoc Tuan Huang, Ruifang Sun, Zaiqiao Zhu, Zhihuang Lu, Zhen Li, Shengkang Zhou, Chen |
| description | The complete Holothuria leucospilata mitochondrial genome was determined and analyzed in this work. It had a circular mapping molecular with a total length of 15,904 bp and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and 1 putative control region. Phylogenetic analysis showed that H. leucospilata clustered together with Holothuria scabra and Holothuria forskali. The complete mitochondrial genome provided in this work would be used for elucidation of Holothuroidea conservation genetics and evolutionary relationships. |
| doi_str_mv | 10.1080/23802359.2019.1644226 |
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It had a circular mapping molecular with a total length of 15,904 bp and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and 1 putative control region. Phylogenetic analysis showed that H. leucospilata clustered together with Holothuria scabra and Holothuria forskali. The complete mitochondrial genome provided in this work would be used for elucidation of Holothuroidea conservation genetics and evolutionary relationships.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2019.1644226</identifier><identifier>PMID: 33365713</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>Bats ; Conservation genetics ; Gene mapping ; Genomes ; Holothuria ; Holothuria leucospilata ; Holothuroidea ; Mitochondria ; mitochondrial genome ; Mitogenome Announcement ; phylogenetic analysis ; Phylogenetics ; Phylogeny ; rRNA ; tRNA</subject><ispartof>Mitochondrial DNA. Part B. 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Published by Informa UK Limited, trading as Taylor & Francis Group. 2019 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c562t-70c89772daa7bd6e81a246477af32ff2217563ff76734286d29a965b08edabe63</citedby><cites>FETCH-LOGICAL-c562t-70c89772daa7bd6e81a246477af32ff2217563ff76734286d29a965b08edabe63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706471/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7706471/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2102,27502,27924,27925,53791,53793,59143,59144</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33365713$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yang, Qiuhua</creatorcontrib><creatorcontrib>Lin, Qi</creatorcontrib><creatorcontrib>Wu, Jianshao</creatorcontrib><creatorcontrib>Tran, Ngoc Tuan</creatorcontrib><creatorcontrib>Huang, Ruifang</creatorcontrib><creatorcontrib>Sun, Zaiqiao</creatorcontrib><creatorcontrib>Zhu, Zhihuang</creatorcontrib><creatorcontrib>Lu, Zhen</creatorcontrib><creatorcontrib>Li, Shengkang</creatorcontrib><creatorcontrib>Zhou, Chen</creatorcontrib><title>Complete mitochondrial genome of Holothuria leucospilata (Holothuroidea, Holothuriidae) and phylogenetic analysis</title><title>Mitochondrial DNA. Part B. Resources</title><addtitle>Mitochondrial DNA B Resour</addtitle><description>The complete Holothuria leucospilata mitochondrial genome was determined and analyzed in this work. It had a circular mapping molecular with a total length of 15,904 bp and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and 1 putative control region. Phylogenetic analysis showed that H. leucospilata clustered together with Holothuria scabra and Holothuria forskali. The complete mitochondrial genome provided in this work would be used for elucidation of Holothuroidea conservation genetics and evolutionary relationships.</description><subject>Bats</subject><subject>Conservation genetics</subject><subject>Gene mapping</subject><subject>Genomes</subject><subject>Holothuria</subject><subject>Holothuria leucospilata</subject><subject>Holothuroidea</subject><subject>Mitochondria</subject><subject>mitochondrial genome</subject><subject>Mitogenome Announcement</subject><subject>phylogenetic analysis</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>rRNA</subject><subject>tRNA</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><sourceid>DOA</sourceid><recordid>eNp9kktvEzEUhUcIRKvSnwAaiU2RSPBrbM8GgSKglSqxgbV1x4_EkWc8tWeK8u9xSFJaFqxsnXv8-V77VNVrjJYYSfSBUIkIbdolQbhdYs4YIfxZdb7XF_vC80f7s-oy5y1CCHMqRCteVmeUUt4ITM-ru1Xsx2AnW_d-inoTB5M8hHpth9jbOrr6OoY4beai1sHOOubRB5igvjoVojcW3v_1eQP2XQ2DqcfNLsRCspPXRYCwyz6_ql44CNleHteL6ufXLz9W14vb799uVp9vF7rhZFoIpGUrBDEAojPcSgyEcSYEOEqcIwSLhlPnBBeUEckNaaHlTYekNdBZTi-qmwPXRNiqMfke0k5F8OqPENNaQSqNBaug8KjTlGKHmGhakJoB5lgK2VpAXWF9PLDGueut0XaYEoQn0KeVwW_UOt4rIVDpGRfA1RGQ4t1s86R6n7UNAQYb56wIK1MggSUr1rf_WLdxTuXxios2BNFWMllczcGlU8w5WffQDEZqnxF1yojaZ0QdM1LOvXk8ycOpUyKK4dPB4AcXUw-_YgpGTVB-MrkEg_ZZ0f_f8Rvj7My8</recordid><startdate>20190703</startdate><enddate>20190703</enddate><creator>Yang, Qiuhua</creator><creator>Lin, Qi</creator><creator>Wu, Jianshao</creator><creator>Tran, Ngoc Tuan</creator><creator>Huang, Ruifang</creator><creator>Sun, Zaiqiao</creator><creator>Zhu, Zhihuang</creator><creator>Lu, Zhen</creator><creator>Li, Shengkang</creator><creator>Zhou, Chen</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20190703</creationdate><title>Complete mitochondrial genome of Holothuria leucospilata (Holothuroidea, Holothuriidae) and phylogenetic analysis</title><author>Yang, Qiuhua ; Lin, Qi ; Wu, Jianshao ; Tran, Ngoc Tuan ; Huang, Ruifang ; Sun, Zaiqiao ; Zhu, Zhihuang ; Lu, Zhen ; Li, Shengkang ; Zhou, Chen</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c562t-70c89772daa7bd6e81a246477af32ff2217563ff76734286d29a965b08edabe63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Bats</topic><topic>Conservation genetics</topic><topic>Gene mapping</topic><topic>Genomes</topic><topic>Holothuria</topic><topic>Holothuria leucospilata</topic><topic>Holothuroidea</topic><topic>Mitochondria</topic><topic>mitochondrial genome</topic><topic>Mitogenome Announcement</topic><topic>phylogenetic analysis</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>rRNA</topic><topic>tRNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yang, Qiuhua</creatorcontrib><creatorcontrib>Lin, Qi</creatorcontrib><creatorcontrib>Wu, Jianshao</creatorcontrib><creatorcontrib>Tran, Ngoc Tuan</creatorcontrib><creatorcontrib>Huang, Ruifang</creatorcontrib><creatorcontrib>Sun, Zaiqiao</creatorcontrib><creatorcontrib>Zhu, Zhihuang</creatorcontrib><creatorcontrib>Lu, Zhen</creatorcontrib><creatorcontrib>Li, Shengkang</creatorcontrib><creatorcontrib>Zhou, Chen</creatorcontrib><collection>Access via Taylor & Francis (Open Access Collection)</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Technology Research Database</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Access via ProQuest (Open Access)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Mitochondrial DNA. 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It had a circular mapping molecular with a total length of 15,904 bp and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and 1 putative control region. Phylogenetic analysis showed that H. leucospilata clustered together with Holothuria scabra and Holothuria forskali. The complete mitochondrial genome provided in this work would be used for elucidation of Holothuroidea conservation genetics and evolutionary relationships.</abstract><cop>England</cop><pub>Taylor & Francis</pub><pmid>33365713</pmid><doi>10.1080/23802359.2019.1644226</doi><tpages>2</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Bats Conservation genetics Gene mapping Genomes Holothuria Holothuria leucospilata Holothuroidea Mitochondria mitochondrial genome Mitogenome Announcement phylogenetic analysis Phylogenetics Phylogeny rRNA tRNA |
| title | Complete mitochondrial genome of Holothuria leucospilata (Holothuroidea, Holothuriidae) and phylogenetic analysis |
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