Ecology, Structure, and Evolution of Shigella Phages
Numerous bacteriophages-viruses of bacteria, also known as phages-have been described for hundreds of bacterial species. The Gram-negative Shigella species are close relatives of Escherichia coli , yet relatively few previously described phages appear to exclusively infect this genus. Recent efforts...
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| Veröffentlicht in: | Annual review of virology 2020-09, Vol.7 (1), p.121-141 |
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| creator | Subramanian, Sundharraman Parent, Kristin N Doore, Sarah M |
| description | Numerous bacteriophages-viruses of bacteria, also known as phages-have been described for hundreds of bacterial species. The Gram-negative
Shigella
species are close relatives of
Escherichia coli
, yet relatively few previously described phages appear to exclusively infect this genus. Recent efforts to isolate
Shigella
phages have indicated these viruses are surprisingly abundant in the environment and have distinct genomic and structural properties. In addition, at least one model system used for experimental evolution studies has revealed a unique mechanism for developing faster infection cycles. Differences between these bacteriophages and other well-described model systems may mirror differences between their hosts' ecology and defense mechanisms. In this review, we discuss the history of
Shigella
phages and recent developments in their isolation and characterization and the structural information available for three model systems, Sf6, Sf14, and HRP29; we also provide an overview of potential selective pressures guiding both
Shigella
phage and host evolution. |
| doi_str_mv | 10.1146/annurev-virology-010320-052547 |
| format | Article |
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Shigella
species are close relatives of
Escherichia coli
, yet relatively few previously described phages appear to exclusively infect this genus. Recent efforts to isolate
Shigella
phages have indicated these viruses are surprisingly abundant in the environment and have distinct genomic and structural properties. In addition, at least one model system used for experimental evolution studies has revealed a unique mechanism for developing faster infection cycles. Differences between these bacteriophages and other well-described model systems may mirror differences between their hosts' ecology and defense mechanisms. In this review, we discuss the history of
Shigella
phages and recent developments in their isolation and characterization and the structural information available for three model systems, Sf6, Sf14, and HRP29; we also provide an overview of potential selective pressures guiding both
Shigella
phage and host evolution.</description><identifier>ISSN: 2327-056X</identifier><identifier>ISSN: 2327-0578</identifier><identifier>EISSN: 2327-0578</identifier><identifier>DOI: 10.1146/annurev-virology-010320-052547</identifier><identifier>PMID: 32392456</identifier><language>eng</language><publisher>United States: Annual Reviews</publisher><subject>Bacteriophages - chemistry ; Bacteriophages - classification ; Bacteriophages - genetics ; Ecology ; Genome, Viral ; Genomics ; Host-Pathogen Interactions - genetics ; lipopolysaccharide ; myoviruses ; Omps ; phage biology ; podoviruses ; Shigella ; Shigella - virology ; Viral Proteins - chemistry ; Viral Proteins - genetics</subject><ispartof>Annual review of virology, 2020-09, Vol.7 (1), p.121-141</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a498t-65edf9165cc39fbf6f702caabcab7cefad30bb9acf6149dc33719ae3f5b4fa913</citedby><cites>FETCH-LOGICAL-a498t-65edf9165cc39fbf6f702caabcab7cefad30bb9acf6149dc33719ae3f5b4fa913</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.annualreviews.org/content/journals/10.1146/annurev-virology-010320-052547?crawler=true&mimetype=application/pdf$$EPDF$$P50$$Gannualreviews$$H</linktopdf><linktohtml>$$Uhttps://www.annualreviews.org/content/journals/10.1146/annurev-virology-010320-052547$$EHTML$$P50$$Gannualreviews$$H</linktohtml><link.rule.ids>70,230,314,776,780,881,4168,27901,27902,77997,77998</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32392456$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Subramanian, Sundharraman</creatorcontrib><creatorcontrib>Parent, Kristin N</creatorcontrib><creatorcontrib>Doore, Sarah M</creatorcontrib><title>Ecology, Structure, and Evolution of Shigella Phages</title><title>Annual review of virology</title><addtitle>Annu Rev Virol</addtitle><description>Numerous bacteriophages-viruses of bacteria, also known as phages-have been described for hundreds of bacterial species. The Gram-negative
Shigella
species are close relatives of
Escherichia coli
, yet relatively few previously described phages appear to exclusively infect this genus. Recent efforts to isolate
Shigella
phages have indicated these viruses are surprisingly abundant in the environment and have distinct genomic and structural properties. In addition, at least one model system used for experimental evolution studies has revealed a unique mechanism for developing faster infection cycles. Differences between these bacteriophages and other well-described model systems may mirror differences between their hosts' ecology and defense mechanisms. In this review, we discuss the history of
Shigella
phages and recent developments in their isolation and characterization and the structural information available for three model systems, Sf6, Sf14, and HRP29; we also provide an overview of potential selective pressures guiding both
Shigella
phage and host evolution.</description><subject>Bacteriophages - chemistry</subject><subject>Bacteriophages - classification</subject><subject>Bacteriophages - genetics</subject><subject>Ecology</subject><subject>Genome, Viral</subject><subject>Genomics</subject><subject>Host-Pathogen Interactions - genetics</subject><subject>lipopolysaccharide</subject><subject>myoviruses</subject><subject>Omps</subject><subject>phage biology</subject><subject>podoviruses</subject><subject>Shigella</subject><subject>Shigella - virology</subject><subject>Viral Proteins - chemistry</subject><subject>Viral Proteins - genetics</subject><issn>2327-056X</issn><issn>2327-0578</issn><issn>2327-0578</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqVkF1LwzAUhoMobsz9BemVeLFq0qTJciPImB8wUJiCd-E0TbZK18yknezf27kP9dKrnJBznvfkQeiC4CtCGL-Gqmq8WcWrwrvSzdYxJpgmOMZpkjJxhLoJTUR7E8PjQ83fOqgfwjvGmBDMUpmeog5NqExYyruIjfU3ahBNa9_ouuUPIqjyaLxyZVMXroqcjabzYmbKEqLnOcxMOEMnFspg-ruzh17vxi-jh3jydP84up3EwOSwjnlqcisJT7Wm0maWW4ETDZBpyIQ2FnKKs0yCtpwwmWtKBZFgqE0zZkES2kM3W-6yyRYm16aqPZRq6YsF-LVyUKi_L1UxVzO3UoILLLlsAZc7gHcfjQm1WhRBb35SGdcElTBMhpQJzH6ytHcheGMPMQSrjX21s6_29tXWvtrabwHnv5c9jO9dtw2jbcMGBGWLKsxn-G_MF5dHoAk</recordid><startdate>20200929</startdate><enddate>20200929</enddate><creator>Subramanian, Sundharraman</creator><creator>Parent, Kristin N</creator><creator>Doore, Sarah M</creator><general>Annual Reviews</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20200929</creationdate><title>Ecology, Structure, and Evolution of Shigella Phages</title><author>Subramanian, Sundharraman ; Parent, Kristin N ; Doore, Sarah M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a498t-65edf9165cc39fbf6f702caabcab7cefad30bb9acf6149dc33719ae3f5b4fa913</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Bacteriophages - chemistry</topic><topic>Bacteriophages - classification</topic><topic>Bacteriophages - genetics</topic><topic>Ecology</topic><topic>Genome, Viral</topic><topic>Genomics</topic><topic>Host-Pathogen Interactions - genetics</topic><topic>lipopolysaccharide</topic><topic>myoviruses</topic><topic>Omps</topic><topic>phage biology</topic><topic>podoviruses</topic><topic>Shigella</topic><topic>Shigella - virology</topic><topic>Viral Proteins - chemistry</topic><topic>Viral Proteins - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Subramanian, Sundharraman</creatorcontrib><creatorcontrib>Parent, Kristin N</creatorcontrib><creatorcontrib>Doore, Sarah M</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Annual review of virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Subramanian, Sundharraman</au><au>Parent, Kristin N</au><au>Doore, Sarah M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Ecology, Structure, and Evolution of Shigella Phages</atitle><jtitle>Annual review of virology</jtitle><addtitle>Annu Rev Virol</addtitle><date>2020-09-29</date><risdate>2020</risdate><volume>7</volume><issue>1</issue><spage>121</spage><epage>141</epage><pages>121-141</pages><issn>2327-056X</issn><issn>2327-0578</issn><eissn>2327-0578</eissn><abstract>Numerous bacteriophages-viruses of bacteria, also known as phages-have been described for hundreds of bacterial species. The Gram-negative
Shigella
species are close relatives of
Escherichia coli
, yet relatively few previously described phages appear to exclusively infect this genus. Recent efforts to isolate
Shigella
phages have indicated these viruses are surprisingly abundant in the environment and have distinct genomic and structural properties. In addition, at least one model system used for experimental evolution studies has revealed a unique mechanism for developing faster infection cycles. Differences between these bacteriophages and other well-described model systems may mirror differences between their hosts' ecology and defense mechanisms. In this review, we discuss the history of
Shigella
phages and recent developments in their isolation and characterization and the structural information available for three model systems, Sf6, Sf14, and HRP29; we also provide an overview of potential selective pressures guiding both
Shigella
phage and host evolution.</abstract><cop>United States</cop><pub>Annual Reviews</pub><pmid>32392456</pmid><doi>10.1146/annurev-virology-010320-052547</doi><tpages>21</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | Annual review of virology, 2020-09, Vol.7 (1), p.121-141 |
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| language | eng |
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| source | Annual Reviews; MEDLINE; EZB-FREE-00999 freely available EZB journals |
| subjects | Bacteriophages - chemistry Bacteriophages - classification Bacteriophages - genetics Ecology Genome, Viral Genomics Host-Pathogen Interactions - genetics lipopolysaccharide myoviruses Omps phage biology podoviruses Shigella Shigella - virology Viral Proteins - chemistry Viral Proteins - genetics |
| title | Ecology, Structure, and Evolution of Shigella Phages |
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