Partial synchronisation of glycolytic oscillations in yeast cell populations
The transition between synchronized and asynchronous behaviour of immobilized yeast cells of the strain Saccharomyces carlsbergensis was investigated by monitoring the autofluorescence of the coenzyme NADH. In populations of intermediate cell densities the individual cells remained oscillatory, wher...
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description | The transition between synchronized and asynchronous behaviour of immobilized yeast cells of the strain
Saccharomyces carlsbergensis
was investigated by monitoring the autofluorescence of the coenzyme NADH. In populations of intermediate cell densities the individual cells remained oscillatory, whereas on the level of the cell population both a partially synchronized and an asynchronous state were accessible for experimental studies. In the partially synchronized state, the mean oscillatory frequency was larger than that of the cells in the asynchronous state. This suggests that synchronisation occurred due to entrainment by the cells that oscillated more rapidly. This is typical for synchronisation due to phase advancement. Furthermore, the synchronisation of the frequency of the glycolytic oscillations preceded the synchronisation of their phases. However, the cells did not synchronize completely, as the distribution of the oscillatory frequencies only narrowed but did not collapse to a unique frequency. Cells belonging to spatially denser clusters showed a slightly enhanced local synchronisation during the episode of partial synchronisation. Neither the clusters nor a transition from partially synchronized glycolytic oscillations to travelling glycolytic waves did substantially affect the degree of partial synchronisation. Chimera states, i.e., the coexistence of a synchronized and an asynchronous part of the population, could not be found. |
doi_str_mv | 10.1038/s41598-020-76242-8 |
format | Article |
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Saccharomyces carlsbergensis
was investigated by monitoring the autofluorescence of the coenzyme NADH. In populations of intermediate cell densities the individual cells remained oscillatory, whereas on the level of the cell population both a partially synchronized and an asynchronous state were accessible for experimental studies. In the partially synchronized state, the mean oscillatory frequency was larger than that of the cells in the asynchronous state. This suggests that synchronisation occurred due to entrainment by the cells that oscillated more rapidly. This is typical for synchronisation due to phase advancement. Furthermore, the synchronisation of the frequency of the glycolytic oscillations preceded the synchronisation of their phases. However, the cells did not synchronize completely, as the distribution of the oscillatory frequencies only narrowed but did not collapse to a unique frequency. Cells belonging to spatially denser clusters showed a slightly enhanced local synchronisation during the episode of partial synchronisation. Neither the clusters nor a transition from partially synchronized glycolytic oscillations to travelling glycolytic waves did substantially affect the degree of partial synchronisation. Chimera states, i.e., the coexistence of a synchronized and an asynchronous part of the population, could not be found.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/s41598-020-76242-8</identifier><identifier>PMID: 33184358</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/57 ; 639/766 ; 639/766/530 ; 639/766/747 ; Entrainment ; Experiments ; Glucose - metabolism ; Glycolysis ; Humanities and Social Sciences ; Metabolism ; Models, Biological ; multidisciplinary ; NAD - metabolism ; NADH ; Neurosciences ; Oscillations ; Population ; Saccharomyces cerevisiae - growth & development ; Saccharomyces cerevisiae - metabolism ; Science ; Science (multidisciplinary) ; Signal Transduction ; Yeast ; Yeasts</subject><ispartof>Scientific reports, 2020-11, Vol.10 (1), p.19714-19714, Article 19714</ispartof><rights>The Author(s) 2020</rights><rights>The Author(s) 2020. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c502t-908d23bca9e9f62c7a92ff58517ca8e4536988fb84ac85f12e9f24575cc6778e3</citedby><cites>FETCH-LOGICAL-c502t-908d23bca9e9f62c7a92ff58517ca8e4536988fb84ac85f12e9f24575cc6778e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7661732/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7661732/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27922,27923,41118,42187,51574,53789,53791</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33184358$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Weber, André</creatorcontrib><creatorcontrib>Zuschratter, Werner</creatorcontrib><creatorcontrib>Hauser, Marcus J. B.</creatorcontrib><title>Partial synchronisation of glycolytic oscillations in yeast cell populations</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>The transition between synchronized and asynchronous behaviour of immobilized yeast cells of the strain
Saccharomyces carlsbergensis
was investigated by monitoring the autofluorescence of the coenzyme NADH. In populations of intermediate cell densities the individual cells remained oscillatory, whereas on the level of the cell population both a partially synchronized and an asynchronous state were accessible for experimental studies. In the partially synchronized state, the mean oscillatory frequency was larger than that of the cells in the asynchronous state. This suggests that synchronisation occurred due to entrainment by the cells that oscillated more rapidly. This is typical for synchronisation due to phase advancement. Furthermore, the synchronisation of the frequency of the glycolytic oscillations preceded the synchronisation of their phases. However, the cells did not synchronize completely, as the distribution of the oscillatory frequencies only narrowed but did not collapse to a unique frequency. Cells belonging to spatially denser clusters showed a slightly enhanced local synchronisation during the episode of partial synchronisation. Neither the clusters nor a transition from partially synchronized glycolytic oscillations to travelling glycolytic waves did substantially affect the degree of partial synchronisation. Chimera states, i.e., the coexistence of a synchronized and an asynchronous part of the population, could not be found.</description><subject>631/57</subject><subject>639/766</subject><subject>639/766/530</subject><subject>639/766/747</subject><subject>Entrainment</subject><subject>Experiments</subject><subject>Glucose - metabolism</subject><subject>Glycolysis</subject><subject>Humanities and Social Sciences</subject><subject>Metabolism</subject><subject>Models, Biological</subject><subject>multidisciplinary</subject><subject>NAD - metabolism</subject><subject>NADH</subject><subject>Neurosciences</subject><subject>Oscillations</subject><subject>Population</subject><subject>Saccharomyces cerevisiae - growth & development</subject><subject>Saccharomyces cerevisiae - metabolism</subject><subject>Science</subject><subject>Science (multidisciplinary)</subject><subject>Signal Transduction</subject><subject>Yeast</subject><subject>Yeasts</subject><issn>2045-2322</issn><issn>2045-2322</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kU9LXDEUxUOxVLF-gS7Kg27cPJvc_N8IRbQWBtpFuw6ZmDdGMsmYvCe8b2_GmVrrwmwSOL97bg4HoU8EnxFM1dfKCNeqx4B7KYBBr96hI8CM90ABDl68D9FJrXe4HQ6aEf0BHVJKFKNcHaHFL1vGYGNX5-RuS06h2jHk1OWhW8XZ5TiPwXW5uhDjk1K7kLrZ2zp2zsfYbfJm2isf0fvBxupP9vcx-nN1-fviul_8_P7j4tuidxzD2GusboAundVeDwKctBqGgStOpLPKM06FVmpYKmad4gOBhgHjkjsnpFSeHqPzne9mWq79jfNpLDaaTQlrW2aTbTD_KyncmlV-MFIIIik0g9O9Qcn3k6-jWYe6TWOTz1M1wASWEgtCGvrlFXqXp5JaPAMcUw6ca_0mxSThAjO6pWBHuZJrLX54_jLBZtuq2bVqWqvmqVWj2tDnl2GfR_522AC6A2qT0sqXf7vfsH0E9jatpQ</recordid><startdate>20201112</startdate><enddate>20201112</enddate><creator>Weber, André</creator><creator>Zuschratter, Werner</creator><creator>Hauser, Marcus J. 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B.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c502t-908d23bca9e9f62c7a92ff58517ca8e4536988fb84ac85f12e9f24575cc6778e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>631/57</topic><topic>639/766</topic><topic>639/766/530</topic><topic>639/766/747</topic><topic>Entrainment</topic><topic>Experiments</topic><topic>Glucose - metabolism</topic><topic>Glycolysis</topic><topic>Humanities and Social Sciences</topic><topic>Metabolism</topic><topic>Models, Biological</topic><topic>multidisciplinary</topic><topic>NAD - metabolism</topic><topic>NADH</topic><topic>Neurosciences</topic><topic>Oscillations</topic><topic>Population</topic><topic>Saccharomyces cerevisiae - growth & development</topic><topic>Saccharomyces cerevisiae - metabolism</topic><topic>Science</topic><topic>Science (multidisciplinary)</topic><topic>Signal Transduction</topic><topic>Yeast</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Weber, André</creatorcontrib><creatorcontrib>Zuschratter, Werner</creatorcontrib><creatorcontrib>Hauser, Marcus J. 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B.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Partial synchronisation of glycolytic oscillations in yeast cell populations</atitle><jtitle>Scientific reports</jtitle><stitle>Sci Rep</stitle><addtitle>Sci Rep</addtitle><date>2020-11-12</date><risdate>2020</risdate><volume>10</volume><issue>1</issue><spage>19714</spage><epage>19714</epage><pages>19714-19714</pages><artnum>19714</artnum><issn>2045-2322</issn><eissn>2045-2322</eissn><abstract>The transition between synchronized and asynchronous behaviour of immobilized yeast cells of the strain
Saccharomyces carlsbergensis
was investigated by monitoring the autofluorescence of the coenzyme NADH. In populations of intermediate cell densities the individual cells remained oscillatory, whereas on the level of the cell population both a partially synchronized and an asynchronous state were accessible for experimental studies. In the partially synchronized state, the mean oscillatory frequency was larger than that of the cells in the asynchronous state. This suggests that synchronisation occurred due to entrainment by the cells that oscillated more rapidly. This is typical for synchronisation due to phase advancement. Furthermore, the synchronisation of the frequency of the glycolytic oscillations preceded the synchronisation of their phases. However, the cells did not synchronize completely, as the distribution of the oscillatory frequencies only narrowed but did not collapse to a unique frequency. Cells belonging to spatially denser clusters showed a slightly enhanced local synchronisation during the episode of partial synchronisation. Neither the clusters nor a transition from partially synchronized glycolytic oscillations to travelling glycolytic waves did substantially affect the degree of partial synchronisation. Chimera states, i.e., the coexistence of a synchronized and an asynchronous part of the population, could not be found.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>33184358</pmid><doi>10.1038/s41598-020-76242-8</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 631/57 639/766 639/766/530 639/766/747 Entrainment Experiments Glucose - metabolism Glycolysis Humanities and Social Sciences Metabolism Models, Biological multidisciplinary NAD - metabolism NADH Neurosciences Oscillations Population Saccharomyces cerevisiae - growth & development Saccharomyces cerevisiae - metabolism Science Science (multidisciplinary) Signal Transduction Yeast Yeasts |
title | Partial synchronisation of glycolytic oscillations in yeast cell populations |
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