Prototyping Sentinel-2 green LAI and brown LAI products for cropland monitoring

For agricultural applications, identification of non-photosynthetic above-ground vegetation is of great interest as it contributes to assess harvest practices, detecting crop residues or drought events, as well as to better predict the carbon, water and nutrients uptake. While the mapping of green L...

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Veröffentlicht in:Remote sensing of environment 2021-03, Vol.255, p.112168, Article 112168
Hauptverfasser: Amin, Eatidal, Verrelst, Jochem, Rivera-Caicedo, Juan Pablo, Pipia, Luca, Ruiz-Verdú, Antonio, Moreno, José
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container_title Remote sensing of environment
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creator Amin, Eatidal
Verrelst, Jochem
Rivera-Caicedo, Juan Pablo
Pipia, Luca
Ruiz-Verdú, Antonio
Moreno, José
description For agricultural applications, identification of non-photosynthetic above-ground vegetation is of great interest as it contributes to assess harvest practices, detecting crop residues or drought events, as well as to better predict the carbon, water and nutrients uptake. While the mapping of green Leaf Area Index (LAI) is well established, current operational retrieval models are not calibrated for LAI estimation over senescent, brown vegetation. This not only leads to an underestimation of LAI when crops are ripening, but is also a missed monitoring opportunity. The high spatial and temporal resolution of Sentinel-2 (S2) satellites constellation offers the possibility to estimate brown LAI (LAIB) next to green LAI (LAIG). By using LAI ground measurements from multiple campaigns associated with airborne or satellite spectra, Gaussian processes regression (GPR) models were developed for both LAIG and LAIB, providing alongside associated uncertainty estimates, which allows to mask out unreliable LAI retrievals with higher uncertainties. A processing chain was implemented to apply both models to S2 images, generating a multiband LAI product at 20 m spatial resolution. The models were adequately validated with in-situ data from various European study sites (LAIG: R2 = 0.7, RMSE = 0.67 m2/m2; LAIB: R2 = 0.62, RMSE = 0.43 m2/m2). Thanks to the S2 bands in the red edge (B5: 705 nm and B6: 740 nm) and in the shortwave infrared (B12: 2190 nm) a distinction between LAIG and LAIB can be achieved. To demonstrate the capability of LAIB to identify when crops start senescing, S2 time series were processed over multiple European study sites and seasonal maps were produced, which show the onset of crop senescence after the green vegetation peak. Particularly, the LAIB product permits the detection of harvest (i.e., sudden drop in LAIB) and the determination of crop residues (i.e., remaining LAIB), although a better spectral sampling in the shortwave infrared would have been desirable to disentangle brown LAI from soil variability and its perturbing effects. Finally, a single total LAI product was created by merging LAIG and LAIB estimates, and then compared to the LAI derived from S2 L2B biophysical processor integrated in SNAP. The spatiotemporal analysis results confirmed the improvement of the proposed descriptors with respect to the standard SNAP LAI product accounting only for photosynthetically active green vegetation. •Sentinel-2 bands can explicitly identify non-p
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While the mapping of green Leaf Area Index (LAI) is well established, current operational retrieval models are not calibrated for LAI estimation over senescent, brown vegetation. This not only leads to an underestimation of LAI when crops are ripening, but is also a missed monitoring opportunity. The high spatial and temporal resolution of Sentinel-2 (S2) satellites constellation offers the possibility to estimate brown LAI (LAIB) next to green LAI (LAIG). By using LAI ground measurements from multiple campaigns associated with airborne or satellite spectra, Gaussian processes regression (GPR) models were developed for both LAIG and LAIB, providing alongside associated uncertainty estimates, which allows to mask out unreliable LAI retrievals with higher uncertainties. A processing chain was implemented to apply both models to S2 images, generating a multiband LAI product at 20 m spatial resolution. The models were adequately validated with in-situ data from various European study sites (LAIG: R2 = 0.7, RMSE = 0.67 m2/m2; LAIB: R2 = 0.62, RMSE = 0.43 m2/m2). Thanks to the S2 bands in the red edge (B5: 705 nm and B6: 740 nm) and in the shortwave infrared (B12: 2190 nm) a distinction between LAIG and LAIB can be achieved. To demonstrate the capability of LAIB to identify when crops start senescing, S2 time series were processed over multiple European study sites and seasonal maps were produced, which show the onset of crop senescence after the green vegetation peak. Particularly, the LAIB product permits the detection of harvest (i.e., sudden drop in LAIB) and the determination of crop residues (i.e., remaining LAIB), although a better spectral sampling in the shortwave infrared would have been desirable to disentangle brown LAI from soil variability and its perturbing effects. Finally, a single total LAI product was created by merging LAIG and LAIB estimates, and then compared to the LAI derived from S2 L2B biophysical processor integrated in SNAP. The spatiotemporal analysis results confirmed the improvement of the proposed descriptors with respect to the standard SNAP LAI product accounting only for photosynthetically active green vegetation. •Sentinel-2 bands can explicitly identify non-photosynthetic vegetation.•LAI is quantified over green (LAIG) and senescent (LAIB) vegetation using GPR.•GPR provides uncertainty estimates, here used for mapping LAIG with LAIB.•LAIB detects dry vegetation residues and harvest events.•LAI total time series capture the whole phenological evolution over croplands.</description><identifier>ISSN: 0034-4257</identifier><identifier>EISSN: 1879-0704</identifier><identifier>DOI: 10.1016/j.rse.2020.112168</identifier><identifier>PMID: 36060228</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Agricultural land ; Airborne sensing ; Brown LAI ; Crop residues ; Crops ; Drought ; Gaussian process ; Gaussian processes regression (GPR) ; Green LAI ; Harvesting ; Leaf area ; Leaf area index ; Machine learning ; Microprocessors ; Monitoring ; Nutrients ; Photosynthesis ; Photosynthetic and non-photosynthetic vegetation ; Prototyping ; Regression analysis ; Residues ; Ripening ; Satellite constellations ; Satellites ; Senescence ; Sentinel-2 ; Short wave radiation ; Spatial discrimination ; Spatial resolution ; Temporal resolution ; Uncertainty ; Vegetation</subject><ispartof>Remote sensing of environment, 2021-03, Vol.255, p.112168, Article 112168</ispartof><rights>2020 Elsevier Inc.</rights><rights>Copyright Elsevier BV Mar 15, 2021</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c479t-aa3ea09ff098274cfa20b7834a6ab0eeb9cdbb3ee8201c4d1daf0174eabf48413</citedby><cites>FETCH-LOGICAL-c479t-aa3ea09ff098274cfa20b7834a6ab0eeb9cdbb3ee8201c4d1daf0174eabf48413</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.rse.2020.112168$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>230,314,780,784,885,3548,27923,27924,45994</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36060228$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Amin, Eatidal</creatorcontrib><creatorcontrib>Verrelst, Jochem</creatorcontrib><creatorcontrib>Rivera-Caicedo, Juan Pablo</creatorcontrib><creatorcontrib>Pipia, Luca</creatorcontrib><creatorcontrib>Ruiz-Verdú, Antonio</creatorcontrib><creatorcontrib>Moreno, José</creatorcontrib><title>Prototyping Sentinel-2 green LAI and brown LAI products for cropland monitoring</title><title>Remote sensing of environment</title><addtitle>Remote Sens Environ</addtitle><description>For agricultural applications, identification of non-photosynthetic above-ground vegetation is of great interest as it contributes to assess harvest practices, detecting crop residues or drought events, as well as to better predict the carbon, water and nutrients uptake. While the mapping of green Leaf Area Index (LAI) is well established, current operational retrieval models are not calibrated for LAI estimation over senescent, brown vegetation. This not only leads to an underestimation of LAI when crops are ripening, but is also a missed monitoring opportunity. The high spatial and temporal resolution of Sentinel-2 (S2) satellites constellation offers the possibility to estimate brown LAI (LAIB) next to green LAI (LAIG). By using LAI ground measurements from multiple campaigns associated with airborne or satellite spectra, Gaussian processes regression (GPR) models were developed for both LAIG and LAIB, providing alongside associated uncertainty estimates, which allows to mask out unreliable LAI retrievals with higher uncertainties. A processing chain was implemented to apply both models to S2 images, generating a multiband LAI product at 20 m spatial resolution. The models were adequately validated with in-situ data from various European study sites (LAIG: R2 = 0.7, RMSE = 0.67 m2/m2; LAIB: R2 = 0.62, RMSE = 0.43 m2/m2). Thanks to the S2 bands in the red edge (B5: 705 nm and B6: 740 nm) and in the shortwave infrared (B12: 2190 nm) a distinction between LAIG and LAIB can be achieved. To demonstrate the capability of LAIB to identify when crops start senescing, S2 time series were processed over multiple European study sites and seasonal maps were produced, which show the onset of crop senescence after the green vegetation peak. Particularly, the LAIB product permits the detection of harvest (i.e., sudden drop in LAIB) and the determination of crop residues (i.e., remaining LAIB), although a better spectral sampling in the shortwave infrared would have been desirable to disentangle brown LAI from soil variability and its perturbing effects. Finally, a single total LAI product was created by merging LAIG and LAIB estimates, and then compared to the LAI derived from S2 L2B biophysical processor integrated in SNAP. The spatiotemporal analysis results confirmed the improvement of the proposed descriptors with respect to the standard SNAP LAI product accounting only for photosynthetically active green vegetation. •Sentinel-2 bands can explicitly identify non-photosynthetic vegetation.•LAI is quantified over green (LAIG) and senescent (LAIB) vegetation using GPR.•GPR provides uncertainty estimates, here used for mapping LAIG with LAIB.•LAIB detects dry vegetation residues and harvest events.•LAI total time series capture the whole phenological evolution over croplands.</description><subject>Agricultural land</subject><subject>Airborne sensing</subject><subject>Brown LAI</subject><subject>Crop residues</subject><subject>Crops</subject><subject>Drought</subject><subject>Gaussian process</subject><subject>Gaussian processes regression (GPR)</subject><subject>Green LAI</subject><subject>Harvesting</subject><subject>Leaf area</subject><subject>Leaf area index</subject><subject>Machine learning</subject><subject>Microprocessors</subject><subject>Monitoring</subject><subject>Nutrients</subject><subject>Photosynthesis</subject><subject>Photosynthetic and non-photosynthetic vegetation</subject><subject>Prototyping</subject><subject>Regression analysis</subject><subject>Residues</subject><subject>Ripening</subject><subject>Satellite constellations</subject><subject>Satellites</subject><subject>Senescence</subject><subject>Sentinel-2</subject><subject>Short wave radiation</subject><subject>Spatial discrimination</subject><subject>Spatial resolution</subject><subject>Temporal resolution</subject><subject>Uncertainty</subject><subject>Vegetation</subject><issn>0034-4257</issn><issn>1879-0704</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9kU9r3DAQxUVpabZpP0AvxdBLL97OyFpLplAIoX8CCykkPQtZHm-1eCVXshPy7aPFaWhz6GkY5jePefMYe4uwRsD6434dE6058Nwjx1o9YytUsilBgnjOVgCVKAXfyBP2KqU9AG6UxJfspKqhBs7Vil3-iGEK093o_K64Ij85T0PJi10k8sX27KIwvivaGG6Xboyhm-2Uij7EwsYwDsf5IXg3hZg1XrMXvRkSvXmop-zn1y_X59_L7eW3i_OzbWmFbKbSmIoMNH0PjeJS2N5waKWqhKlNC0RtY7u2rYgUB7Siw870gFKQaXuhBFan7POiO87tgTqbL49m0GN0BxPvdDBO_zvx7pfehRsta6yEqrPAhweBGH7PlCZ9cMnSkP1QmJPmEpoGKylERt8_Qfdhjj7b03wDFUreIM8ULlT-SkqR-sdjEPQxLr3XOS59jEsvceWdd3-7eNz4k08GPi0A5V_eOIo6WUfeUuci2Ul3wf1H_h7Qr6Zl</recordid><startdate>20210315</startdate><enddate>20210315</enddate><creator>Amin, Eatidal</creator><creator>Verrelst, Jochem</creator><creator>Rivera-Caicedo, Juan Pablo</creator><creator>Pipia, Luca</creator><creator>Ruiz-Verdú, Antonio</creator><creator>Moreno, José</creator><general>Elsevier Inc</general><general>Elsevier BV</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QO</scope><scope>7QQ</scope><scope>7SC</scope><scope>7SE</scope><scope>7SN</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7TG</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>C1K</scope><scope>F28</scope><scope>FR3</scope><scope>H8D</scope><scope>H8G</scope><scope>JG9</scope><scope>JQ2</scope><scope>KL.</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>P64</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20210315</creationdate><title>Prototyping Sentinel-2 green LAI and brown LAI products for cropland monitoring</title><author>Amin, Eatidal ; 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While the mapping of green Leaf Area Index (LAI) is well established, current operational retrieval models are not calibrated for LAI estimation over senescent, brown vegetation. This not only leads to an underestimation of LAI when crops are ripening, but is also a missed monitoring opportunity. The high spatial and temporal resolution of Sentinel-2 (S2) satellites constellation offers the possibility to estimate brown LAI (LAIB) next to green LAI (LAIG). By using LAI ground measurements from multiple campaigns associated with airborne or satellite spectra, Gaussian processes regression (GPR) models were developed for both LAIG and LAIB, providing alongside associated uncertainty estimates, which allows to mask out unreliable LAI retrievals with higher uncertainties. A processing chain was implemented to apply both models to S2 images, generating a multiband LAI product at 20 m spatial resolution. The models were adequately validated with in-situ data from various European study sites (LAIG: R2 = 0.7, RMSE = 0.67 m2/m2; LAIB: R2 = 0.62, RMSE = 0.43 m2/m2). Thanks to the S2 bands in the red edge (B5: 705 nm and B6: 740 nm) and in the shortwave infrared (B12: 2190 nm) a distinction between LAIG and LAIB can be achieved. To demonstrate the capability of LAIB to identify when crops start senescing, S2 time series were processed over multiple European study sites and seasonal maps were produced, which show the onset of crop senescence after the green vegetation peak. Particularly, the LAIB product permits the detection of harvest (i.e., sudden drop in LAIB) and the determination of crop residues (i.e., remaining LAIB), although a better spectral sampling in the shortwave infrared would have been desirable to disentangle brown LAI from soil variability and its perturbing effects. Finally, a single total LAI product was created by merging LAIG and LAIB estimates, and then compared to the LAI derived from S2 L2B biophysical processor integrated in SNAP. The spatiotemporal analysis results confirmed the improvement of the proposed descriptors with respect to the standard SNAP LAI product accounting only for photosynthetically active green vegetation. •Sentinel-2 bands can explicitly identify non-photosynthetic vegetation.•LAI is quantified over green (LAIG) and senescent (LAIB) vegetation using GPR.•GPR provides uncertainty estimates, here used for mapping LAIG with LAIB.•LAIB detects dry vegetation residues and harvest events.•LAI total time series capture the whole phenological evolution over croplands.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>36060228</pmid><doi>10.1016/j.rse.2020.112168</doi><oa>free_for_read</oa></addata></record>
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subjects Agricultural land
Airborne sensing
Brown LAI
Crop residues
Crops
Drought
Gaussian process
Gaussian processes regression (GPR)
Green LAI
Harvesting
Leaf area
Leaf area index
Machine learning
Microprocessors
Monitoring
Nutrients
Photosynthesis
Photosynthetic and non-photosynthetic vegetation
Prototyping
Regression analysis
Residues
Ripening
Satellite constellations
Satellites
Senescence
Sentinel-2
Short wave radiation
Spatial discrimination
Spatial resolution
Temporal resolution
Uncertainty
Vegetation
title Prototyping Sentinel-2 green LAI and brown LAI products for cropland monitoring
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