HIGH CROSSOVER RATE1 encodes PROTEIN PHOSPHATASE X1 and restricts meiotic crossovers in Arabidopsis
Meiotic crossovers are tightly restricted in most eukaryotes, despite an excess of initiating DNA double-strand breaks. The majority of plant crossovers are dependent on class I interfering repair, with a minority formed via the class II pathway. Class II repair is limited by anti-recombination path...
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Veröffentlicht in: | Nature plants 2021-04, Vol.7 (4), p.452-467 |
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creator | Nageswaran, Divyashree C. Kim, Jaeil Lambing, Christophe Kim, Juhyun Park, Jihye Kim, Eun-Jung Cho, Hyun Seob Kim, Heejin Byun, Dohwan Park, Yeong Mi Kuo, Pallas Lee, Seungchul Tock, Andrew J. Zhao, Xiaohui Hwang, Ildoo Choi, Kyuha Henderson, Ian R. |
description | Meiotic crossovers are tightly restricted in most eukaryotes, despite an excess of initiating DNA double-strand breaks. The majority of plant crossovers are dependent on class I interfering repair, with a minority formed via the class II pathway. Class II repair is limited by anti-recombination pathways; however, similar pathways repressing class I crossovers have not been identified. Here, we performed a forward genetic screen in
Arabidopsis
using fluorescent crossover reporters to identify mutants with increased or decreased recombination frequency. We identified
HIGH CROSSOVER RATE1
(
HCR1
) as repressing crossovers and encoding PROTEIN PHOSPHATASE X1. Genome-wide analysis showed that
hcr1
crossovers are increased in the distal chromosome arms. MLH1 foci significantly increase in
hcr1
and crossover interference decreases, demonstrating an effect on class I repair. Consistently, yeast two-hybrid and in planta assays show interaction between HCR1 and class I proteins, including HEI10, PTD, MSH5 and MLH1. We propose that HCR1 plays a major role in opposition to pro-recombination kinases to restrict crossovers in
Arabidopsis
.
HIGH CROSSOVER RATE1
(
HCR1
) represses meiotic crossovers and encodes PROTEIN PHOSPHATASE X1, which therefore has a major role opposing the function of pro-recombination kinases to restrict crossovers in
Arabidopsis
. |
doi_str_mv | 10.1038/s41477-021-00889-y |
format | Article |
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Arabidopsis
using fluorescent crossover reporters to identify mutants with increased or decreased recombination frequency. We identified
HIGH CROSSOVER RATE1
(
HCR1
) as repressing crossovers and encoding PROTEIN PHOSPHATASE X1. Genome-wide analysis showed that
hcr1
crossovers are increased in the distal chromosome arms. MLH1 foci significantly increase in
hcr1
and crossover interference decreases, demonstrating an effect on class I repair. Consistently, yeast two-hybrid and in planta assays show interaction between HCR1 and class I proteins, including HEI10, PTD, MSH5 and MLH1. We propose that HCR1 plays a major role in opposition to pro-recombination kinases to restrict crossovers in
Arabidopsis
.
HIGH CROSSOVER RATE1
(
HCR1
) represses meiotic crossovers and encodes PROTEIN PHOSPHATASE X1, which therefore has a major role opposing the function of pro-recombination kinases to restrict crossovers in
Arabidopsis
.</description><identifier>ISSN: 2055-0278</identifier><identifier>EISSN: 2055-0278</identifier><identifier>DOI: 10.1038/s41477-021-00889-y</identifier><identifier>PMID: 33846593</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>14 ; 14/35 ; 42 ; 42/47 ; 45 ; 45/22 ; 45/23 ; 631/449/1659 ; 631/449/2491 ; Amino Acid Sequence ; Arabidopsis ; Arabidopsis - genetics ; Arabidopsis - metabolism ; Biomedical and Life Sciences ; Chromosomes ; Crossing Over, Genetic ; Crossovers ; Deoxyribonucleic acid ; DNA ; DNA damage ; Eukaryotes ; Fluorescence ; Genetic screening ; Genomes ; Kinases ; Life Sciences ; Meiosis ; MLH1 protein ; Phosphatase ; Plant Sciences ; Protein phosphatase ; Proteins ; Recombination ; Repair ; Sequence Alignment ; Yeasts</subject><ispartof>Nature plants, 2021-04, Vol.7 (4), p.452-467</ispartof><rights>The Author(s), under exclusive licence to Springer Nature Limited 2021</rights><rights>The Author(s), under exclusive licence to Springer Nature Limited 2021.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c474t-28ecc18a783a029be84b1964887eeba9dbef6b67cbd4dd13ef3c6f4449a29ba33</citedby><cites>FETCH-LOGICAL-c474t-28ecc18a783a029be84b1964887eeba9dbef6b67cbd4dd13ef3c6f4449a29ba33</cites><orcidid>0000-0001-5435-2026 ; 0000-0002-9454-3326 ; 0000-0002-1980-2252 ; 0000-0002-4072-3807 ; 0000-0001-5066-1489 ; 0000-0002-6590-8314 ; 0000-0001-9922-2815</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/s41477-021-00889-y$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/s41477-021-00889-y$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,314,776,780,881,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33846593$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nageswaran, Divyashree C.</creatorcontrib><creatorcontrib>Kim, Jaeil</creatorcontrib><creatorcontrib>Lambing, Christophe</creatorcontrib><creatorcontrib>Kim, Juhyun</creatorcontrib><creatorcontrib>Park, Jihye</creatorcontrib><creatorcontrib>Kim, Eun-Jung</creatorcontrib><creatorcontrib>Cho, Hyun Seob</creatorcontrib><creatorcontrib>Kim, Heejin</creatorcontrib><creatorcontrib>Byun, Dohwan</creatorcontrib><creatorcontrib>Park, Yeong Mi</creatorcontrib><creatorcontrib>Kuo, Pallas</creatorcontrib><creatorcontrib>Lee, Seungchul</creatorcontrib><creatorcontrib>Tock, Andrew J.</creatorcontrib><creatorcontrib>Zhao, Xiaohui</creatorcontrib><creatorcontrib>Hwang, Ildoo</creatorcontrib><creatorcontrib>Choi, Kyuha</creatorcontrib><creatorcontrib>Henderson, Ian R.</creatorcontrib><title>HIGH CROSSOVER RATE1 encodes PROTEIN PHOSPHATASE X1 and restricts meiotic crossovers in Arabidopsis</title><title>Nature plants</title><addtitle>Nat. Plants</addtitle><addtitle>Nat Plants</addtitle><description>Meiotic crossovers are tightly restricted in most eukaryotes, despite an excess of initiating DNA double-strand breaks. The majority of plant crossovers are dependent on class I interfering repair, with a minority formed via the class II pathway. Class II repair is limited by anti-recombination pathways; however, similar pathways repressing class I crossovers have not been identified. Here, we performed a forward genetic screen in
Arabidopsis
using fluorescent crossover reporters to identify mutants with increased or decreased recombination frequency. We identified
HIGH CROSSOVER RATE1
(
HCR1
) as repressing crossovers and encoding PROTEIN PHOSPHATASE X1. Genome-wide analysis showed that
hcr1
crossovers are increased in the distal chromosome arms. MLH1 foci significantly increase in
hcr1
and crossover interference decreases, demonstrating an effect on class I repair. Consistently, yeast two-hybrid and in planta assays show interaction between HCR1 and class I proteins, including HEI10, PTD, MSH5 and MLH1. We propose that HCR1 plays a major role in opposition to pro-recombination kinases to restrict crossovers in
Arabidopsis
.
HIGH CROSSOVER RATE1
(
HCR1
) represses meiotic crossovers and encodes PROTEIN PHOSPHATASE X1, which therefore has a major role opposing the function of pro-recombination kinases to restrict crossovers in
Arabidopsis
.</description><subject>14</subject><subject>14/35</subject><subject>42</subject><subject>42/47</subject><subject>45</subject><subject>45/22</subject><subject>45/23</subject><subject>631/449/1659</subject><subject>631/449/2491</subject><subject>Amino Acid Sequence</subject><subject>Arabidopsis</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - metabolism</subject><subject>Biomedical and Life Sciences</subject><subject>Chromosomes</subject><subject>Crossing Over, Genetic</subject><subject>Crossovers</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA damage</subject><subject>Eukaryotes</subject><subject>Fluorescence</subject><subject>Genetic screening</subject><subject>Genomes</subject><subject>Kinases</subject><subject>Life Sciences</subject><subject>Meiosis</subject><subject>MLH1 protein</subject><subject>Phosphatase</subject><subject>Plant Sciences</subject><subject>Protein phosphatase</subject><subject>Proteins</subject><subject>Recombination</subject><subject>Repair</subject><subject>Sequence Alignment</subject><subject>Yeasts</subject><issn>2055-0278</issn><issn>2055-0278</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>AFKRA</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><recordid>eNp9kU9v1DAQxS0EolXbL8ABWeLCJeB_iZ0LUrRKm5UqstpdEDfLcSbF1W682NlK--1xu6UtHDjZ8vzmjd88hN5R8okSrj5HQYWUGWE0I0SpMju8QqeM5Hl6kur1i_sJuojxlhBCZZ7zgrxFJ5wrUeQlP0W2mV81eLZsV6v2e73Ey2pdUwyj9T1EvFi263r-FS-adrVoqnW1qvEPis3Y4wBxCs5OEW_B-clZbIOP0d9BiNiNuAqmc73fRRfP0ZvBbCJcPJ5n6NtlvZ412XV7NZ9V15kVUkwZU2AtVUYqbggrO1Cio2UhlJIAnSn7DoaiK6TtetH3lMPAbTEIIUqTaMP5Gfpy1N3tuy30FsYpmI3eBbc14aC9cfrvyuh-6ht_p2VBSZGLJPDxUSD4X_tkUG9dtLDZmBH8PmqWU8Y5Z6xI6Id_0Fu_D2Oyd08JJdO-WaLYkXrYTYDh6TOU6PsY9TFGnWLUDzHqQ2p6_9LGU8uf0BLAj0BMpfEGwvPs_8j-Bveip0Y</recordid><startdate>20210401</startdate><enddate>20210401</enddate><creator>Nageswaran, Divyashree C.</creator><creator>Kim, Jaeil</creator><creator>Lambing, Christophe</creator><creator>Kim, Juhyun</creator><creator>Park, Jihye</creator><creator>Kim, Eun-Jung</creator><creator>Cho, Hyun Seob</creator><creator>Kim, Heejin</creator><creator>Byun, Dohwan</creator><creator>Park, Yeong Mi</creator><creator>Kuo, Pallas</creator><creator>Lee, Seungchul</creator><creator>Tock, Andrew J.</creator><creator>Zhao, Xiaohui</creator><creator>Hwang, Ildoo</creator><creator>Choi, Kyuha</creator><creator>Henderson, Ian R.</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>HCIFZ</scope><scope>PCBAR</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-5435-2026</orcidid><orcidid>https://orcid.org/0000-0002-9454-3326</orcidid><orcidid>https://orcid.org/0000-0002-1980-2252</orcidid><orcidid>https://orcid.org/0000-0002-4072-3807</orcidid><orcidid>https://orcid.org/0000-0001-5066-1489</orcidid><orcidid>https://orcid.org/0000-0002-6590-8314</orcidid><orcidid>https://orcid.org/0000-0001-9922-2815</orcidid></search><sort><creationdate>20210401</creationdate><title>HIGH CROSSOVER RATE1 encodes PROTEIN PHOSPHATASE X1 and restricts meiotic crossovers in Arabidopsis</title><author>Nageswaran, Divyashree C. ; Kim, Jaeil ; Lambing, Christophe ; Kim, Juhyun ; Park, Jihye ; Kim, Eun-Jung ; Cho, Hyun Seob ; Kim, Heejin ; Byun, Dohwan ; Park, Yeong Mi ; Kuo, Pallas ; Lee, Seungchul ; Tock, Andrew J. ; Zhao, Xiaohui ; Hwang, Ildoo ; Choi, Kyuha ; Henderson, Ian R.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c474t-28ecc18a783a029be84b1964887eeba9dbef6b67cbd4dd13ef3c6f4449a29ba33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>14</topic><topic>14/35</topic><topic>42</topic><topic>42/47</topic><topic>45</topic><topic>45/22</topic><topic>45/23</topic><topic>631/449/1659</topic><topic>631/449/2491</topic><topic>Amino Acid Sequence</topic><topic>Arabidopsis</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - metabolism</topic><topic>Biomedical and Life Sciences</topic><topic>Chromosomes</topic><topic>Crossing Over, Genetic</topic><topic>Crossovers</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA damage</topic><topic>Eukaryotes</topic><topic>Fluorescence</topic><topic>Genetic screening</topic><topic>Genomes</topic><topic>Kinases</topic><topic>Life Sciences</topic><topic>Meiosis</topic><topic>MLH1 protein</topic><topic>Phosphatase</topic><topic>Plant Sciences</topic><topic>Protein phosphatase</topic><topic>Proteins</topic><topic>Recombination</topic><topic>Repair</topic><topic>Sequence Alignment</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nageswaran, Divyashree C.</creatorcontrib><creatorcontrib>Kim, Jaeil</creatorcontrib><creatorcontrib>Lambing, Christophe</creatorcontrib><creatorcontrib>Kim, Juhyun</creatorcontrib><creatorcontrib>Park, Jihye</creatorcontrib><creatorcontrib>Kim, Eun-Jung</creatorcontrib><creatorcontrib>Cho, Hyun Seob</creatorcontrib><creatorcontrib>Kim, Heejin</creatorcontrib><creatorcontrib>Byun, Dohwan</creatorcontrib><creatorcontrib>Park, Yeong Mi</creatorcontrib><creatorcontrib>Kuo, Pallas</creatorcontrib><creatorcontrib>Lee, Seungchul</creatorcontrib><creatorcontrib>Tock, Andrew J.</creatorcontrib><creatorcontrib>Zhao, Xiaohui</creatorcontrib><creatorcontrib>Hwang, Ildoo</creatorcontrib><creatorcontrib>Choi, Kyuha</creatorcontrib><creatorcontrib>Henderson, Ian R.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central</collection><collection>Natural Science Collection (ProQuest)</collection><collection>Earth, Atmospheric & Aquatic Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>SciTech Premium Collection</collection><collection>Earth, Atmospheric & Aquatic Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Nature plants</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nageswaran, Divyashree C.</au><au>Kim, Jaeil</au><au>Lambing, Christophe</au><au>Kim, Juhyun</au><au>Park, Jihye</au><au>Kim, Eun-Jung</au><au>Cho, Hyun Seob</au><au>Kim, Heejin</au><au>Byun, Dohwan</au><au>Park, Yeong Mi</au><au>Kuo, Pallas</au><au>Lee, Seungchul</au><au>Tock, Andrew J.</au><au>Zhao, Xiaohui</au><au>Hwang, Ildoo</au><au>Choi, Kyuha</au><au>Henderson, Ian R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>HIGH CROSSOVER RATE1 encodes PROTEIN PHOSPHATASE X1 and restricts meiotic crossovers in Arabidopsis</atitle><jtitle>Nature plants</jtitle><stitle>Nat. Plants</stitle><addtitle>Nat Plants</addtitle><date>2021-04-01</date><risdate>2021</risdate><volume>7</volume><issue>4</issue><spage>452</spage><epage>467</epage><pages>452-467</pages><issn>2055-0278</issn><eissn>2055-0278</eissn><abstract>Meiotic crossovers are tightly restricted in most eukaryotes, despite an excess of initiating DNA double-strand breaks. The majority of plant crossovers are dependent on class I interfering repair, with a minority formed via the class II pathway. Class II repair is limited by anti-recombination pathways; however, similar pathways repressing class I crossovers have not been identified. Here, we performed a forward genetic screen in
Arabidopsis
using fluorescent crossover reporters to identify mutants with increased or decreased recombination frequency. We identified
HIGH CROSSOVER RATE1
(
HCR1
) as repressing crossovers and encoding PROTEIN PHOSPHATASE X1. Genome-wide analysis showed that
hcr1
crossovers are increased in the distal chromosome arms. MLH1 foci significantly increase in
hcr1
and crossover interference decreases, demonstrating an effect on class I repair. Consistently, yeast two-hybrid and in planta assays show interaction between HCR1 and class I proteins, including HEI10, PTD, MSH5 and MLH1. We propose that HCR1 plays a major role in opposition to pro-recombination kinases to restrict crossovers in
Arabidopsis
.
HIGH CROSSOVER RATE1
(
HCR1
) represses meiotic crossovers and encodes PROTEIN PHOSPHATASE X1, which therefore has a major role opposing the function of pro-recombination kinases to restrict crossovers in
Arabidopsis
.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>33846593</pmid><doi>10.1038/s41477-021-00889-y</doi><tpages>16</tpages><orcidid>https://orcid.org/0000-0001-5435-2026</orcidid><orcidid>https://orcid.org/0000-0002-9454-3326</orcidid><orcidid>https://orcid.org/0000-0002-1980-2252</orcidid><orcidid>https://orcid.org/0000-0002-4072-3807</orcidid><orcidid>https://orcid.org/0000-0001-5066-1489</orcidid><orcidid>https://orcid.org/0000-0002-6590-8314</orcidid><orcidid>https://orcid.org/0000-0001-9922-2815</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 14 14/35 42 42/47 45 45/22 45/23 631/449/1659 631/449/2491 Amino Acid Sequence Arabidopsis Arabidopsis - genetics Arabidopsis - metabolism Biomedical and Life Sciences Chromosomes Crossing Over, Genetic Crossovers Deoxyribonucleic acid DNA DNA damage Eukaryotes Fluorescence Genetic screening Genomes Kinases Life Sciences Meiosis MLH1 protein Phosphatase Plant Sciences Protein phosphatase Proteins Recombination Repair Sequence Alignment Yeasts |
title | HIGH CROSSOVER RATE1 encodes PROTEIN PHOSPHATASE X1 and restricts meiotic crossovers in Arabidopsis |
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