The mutational signature profile of known and suspected human carcinogens in mice

Epidemiological studies have identified many environmental agents that appear to significantly increase cancer risk in human populations. By analyzing tumor genomes from mice chronically exposed to 1 of 20 known or suspected human carcinogens, we reveal that most agents do not generate distinct muta...

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Veröffentlicht in:Nature genetics 2020-11, Vol.52 (11), p.1189-1197
Hauptverfasser: Riva, Laura, Pandiri, Arun R., Li, Yun Rose, Droop, Alastair, Hewinson, James, Quail, Michael A., Iyer, Vivek, Shepherd, Rebecca, Herbert, Ronald A., Campbell, Peter J., Sills, Robert C., Alexandrov, Ludmil B., Balmain, Allan, Adams, David J.
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container_end_page 1197
container_issue 11
container_start_page 1189
container_title Nature genetics
container_volume 52
creator Riva, Laura
Pandiri, Arun R.
Li, Yun Rose
Droop, Alastair
Hewinson, James
Quail, Michael A.
Iyer, Vivek
Shepherd, Rebecca
Herbert, Ronald A.
Campbell, Peter J.
Sills, Robert C.
Alexandrov, Ludmil B.
Balmain, Allan
Adams, David J.
description Epidemiological studies have identified many environmental agents that appear to significantly increase cancer risk in human populations. By analyzing tumor genomes from mice chronically exposed to 1 of 20 known or suspected human carcinogens, we reveal that most agents do not generate distinct mutational signatures or increase mutation burden, with most mutations, including driver mutations, resulting from tissue-specific endogenous processes. We identify signatures resulting from exposure to cobalt and vinylidene chloride and link distinct human signatures (SBS19 and SBS42) with 1,2,3-trichloropropane, a haloalkane and pollutant of drinking water, and find these and other signatures in human tumor genomes. We define the cross-species genomic landscape of tumors induced by an important compendium of agents with relevance to human health. A genomic analysis of tumors in mice caused by known or suspected carcinogens shows that most carcinogens do not generate distinct mutational signatures.
doi_str_mv 10.1038/s41588-020-0692-4
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subjects 631/114
631/208
631/67
631/92
692/699/67
Agriculture
Animal Genetics and Genomics
Animals
Biomedical and Life Sciences
Biomedicine
Cancer
Cancer Research
Carcinogenesis - genetics
Carcinogens
Carcinogens - toxicity
Chemicals
Cobalt
Cocarcinogens
Deoxyribonucleic acid
DNA
DNA Mutational Analysis
Drinking water
Environmental Pollutants - toxicity
Epidemiology
Female
Gene Function
Gene mutations
Genetic aspects
Genome
Genomes
Genomics
Health aspects
Health risks
Human Genetics
Human populations
Humans
Liver
Male
Methods
Mice
Mutation
Mutation Rate
Oncology, Experimental
Pollutants
Propane - analogs & derivatives
Propane - toxicity
Public health
Risk factors
Signatures
Species Specificity
Toxicology
Trichloropropane
Tumorigenesis
Tumors
Vinylidene
Vinylidene chloride
Water pollution
title The mutational signature profile of known and suspected human carcinogens in mice
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