RNA Editing Alters miRNA Function in Chronic Lymphocytic Leukemia

Chronic lymphocytic leukemia (CLL) is a high incidence B cell leukemia with a highly variable clinical course, leading to survival times ranging from months to several decades. MicroRNAs (miRNAs) are small non-coding RNAs that regulate the expression levels of genes by binding to the untranslated re...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Cancers 2020-05, Vol.12 (5), p.1159
Hauptverfasser: Gassner, Franz J, Zaborsky, Nadja, Feldbacher, Daniel, Greil, Richard, Geisberger, Roland
Format: Artikel
Sprache:eng
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page
container_issue 5
container_start_page 1159
container_title Cancers
container_volume 12
creator Gassner, Franz J
Zaborsky, Nadja
Feldbacher, Daniel
Greil, Richard
Geisberger, Roland
description Chronic lymphocytic leukemia (CLL) is a high incidence B cell leukemia with a highly variable clinical course, leading to survival times ranging from months to several decades. MicroRNAs (miRNAs) are small non-coding RNAs that regulate the expression levels of genes by binding to the untranslated regions of transcripts. Although miRNAs have been previously shown to play a crucial role in CLL development, progression and treatment resistance, their further processing and diversification by RNA editing (specifically adenosine to inosine or cytosine to uracil deamination) has not been addressed so far. In this study, we analyzed next generation sequencing data to provide a detailed map of adenosine to inosine and cytosine to uracil changes in miRNAs from CLL and normal B cells. Our results reveal that in addition to a CLL-specific expression pattern, there is also specific RNA editing of many miRNAs, particularly miR-3157 and miR-6503, in CLL. Our data draw further light on how miRNAs and miRNA editing might be implicated in the pathogenesis of the disease.
doi_str_mv 10.3390/cancers12051159
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7280959</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2400551005</sourcerecordid><originalsourceid>FETCH-LOGICAL-c393t-4135550cd1416816f4b603776de9d8ebebe278c5c18c7e8bd47280e4db8e8ce33</originalsourceid><addsrcrecordid>eNpdkNFLwzAQxoMobsw9-yZ99GUuaZo0eRHK2FQYCqLPoU1vW7RNZtIK--9t2RzTC1yOu-9-CR9C1wTfUSrxVOdWgw8kxowQJs_QMMZpPOFcJucn9QCNQ_jAXVBKUp5eogGNqcBc8iHKXp-zaF6axth1lFVNx4tq0zcXrdWNcTYyNpptvLNGR8tdvd04vWv6GtpPqE1-hS5WeRVgfLhH6H0xf5s9TpYvD0-zbDnRVNJmkhDKGMO6JAnhgvBVUnBM05SXIEsBRXfiVGimidApiKJM0lhgSMpCgNBA6Qjd77nbtqih1GAbn1dq602d-51yuVF_J9Zs1Np9q54jmewAtweAd18thEbVJmioqtyCa4OKE4wZI13qpNO9VHsXgofV8RmCVe-9-ud9t3Fz-ruj_tdp-gNcOoDR</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2400551005</pqid></control><display><type>article</type><title>RNA Editing Alters miRNA Function in Chronic Lymphocytic Leukemia</title><source>PubMed Central Open Access</source><source>MDPI - Multidisciplinary Digital Publishing Institute</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><creator>Gassner, Franz J ; Zaborsky, Nadja ; Feldbacher, Daniel ; Greil, Richard ; Geisberger, Roland</creator><creatorcontrib>Gassner, Franz J ; Zaborsky, Nadja ; Feldbacher, Daniel ; Greil, Richard ; Geisberger, Roland</creatorcontrib><description>Chronic lymphocytic leukemia (CLL) is a high incidence B cell leukemia with a highly variable clinical course, leading to survival times ranging from months to several decades. MicroRNAs (miRNAs) are small non-coding RNAs that regulate the expression levels of genes by binding to the untranslated regions of transcripts. Although miRNAs have been previously shown to play a crucial role in CLL development, progression and treatment resistance, their further processing and diversification by RNA editing (specifically adenosine to inosine or cytosine to uracil deamination) has not been addressed so far. In this study, we analyzed next generation sequencing data to provide a detailed map of adenosine to inosine and cytosine to uracil changes in miRNAs from CLL and normal B cells. Our results reveal that in addition to a CLL-specific expression pattern, there is also specific RNA editing of many miRNAs, particularly miR-3157 and miR-6503, in CLL. Our data draw further light on how miRNAs and miRNA editing might be implicated in the pathogenesis of the disease.</description><identifier>ISSN: 2072-6694</identifier><identifier>EISSN: 2072-6694</identifier><identifier>DOI: 10.3390/cancers12051159</identifier><identifier>PMID: 32380696</identifier><language>eng</language><publisher>Switzerland: MDPI</publisher><ispartof>Cancers, 2020-05, Vol.12 (5), p.1159</ispartof><rights>2020 by the authors. 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c393t-4135550cd1416816f4b603776de9d8ebebe278c5c18c7e8bd47280e4db8e8ce33</citedby><cites>FETCH-LOGICAL-c393t-4135550cd1416816f4b603776de9d8ebebe278c5c18c7e8bd47280e4db8e8ce33</cites><orcidid>0000-0002-0131-2191 ; 0000-0002-4462-3694 ; 0000-0002-9775-185X ; 0000-0001-9894-0313</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7280959/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7280959/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27922,27923,53789,53791</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32380696$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gassner, Franz J</creatorcontrib><creatorcontrib>Zaborsky, Nadja</creatorcontrib><creatorcontrib>Feldbacher, Daniel</creatorcontrib><creatorcontrib>Greil, Richard</creatorcontrib><creatorcontrib>Geisberger, Roland</creatorcontrib><title>RNA Editing Alters miRNA Function in Chronic Lymphocytic Leukemia</title><title>Cancers</title><addtitle>Cancers (Basel)</addtitle><description>Chronic lymphocytic leukemia (CLL) is a high incidence B cell leukemia with a highly variable clinical course, leading to survival times ranging from months to several decades. MicroRNAs (miRNAs) are small non-coding RNAs that regulate the expression levels of genes by binding to the untranslated regions of transcripts. Although miRNAs have been previously shown to play a crucial role in CLL development, progression and treatment resistance, their further processing and diversification by RNA editing (specifically adenosine to inosine or cytosine to uracil deamination) has not been addressed so far. In this study, we analyzed next generation sequencing data to provide a detailed map of adenosine to inosine and cytosine to uracil changes in miRNAs from CLL and normal B cells. Our results reveal that in addition to a CLL-specific expression pattern, there is also specific RNA editing of many miRNAs, particularly miR-3157 and miR-6503, in CLL. Our data draw further light on how miRNAs and miRNA editing might be implicated in the pathogenesis of the disease.</description><issn>2072-6694</issn><issn>2072-6694</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNpdkNFLwzAQxoMobsw9-yZ99GUuaZo0eRHK2FQYCqLPoU1vW7RNZtIK--9t2RzTC1yOu-9-CR9C1wTfUSrxVOdWgw8kxowQJs_QMMZpPOFcJucn9QCNQ_jAXVBKUp5eogGNqcBc8iHKXp-zaF6axth1lFVNx4tq0zcXrdWNcTYyNpptvLNGR8tdvd04vWv6GtpPqE1-hS5WeRVgfLhH6H0xf5s9TpYvD0-zbDnRVNJmkhDKGMO6JAnhgvBVUnBM05SXIEsBRXfiVGimidApiKJM0lhgSMpCgNBA6Qjd77nbtqih1GAbn1dq602d-51yuVF_J9Zs1Np9q54jmewAtweAd18thEbVJmioqtyCa4OKE4wZI13qpNO9VHsXgofV8RmCVe-9-ud9t3Fz-ruj_tdp-gNcOoDR</recordid><startdate>20200505</startdate><enddate>20200505</enddate><creator>Gassner, Franz J</creator><creator>Zaborsky, Nadja</creator><creator>Feldbacher, Daniel</creator><creator>Greil, Richard</creator><creator>Geisberger, Roland</creator><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-0131-2191</orcidid><orcidid>https://orcid.org/0000-0002-4462-3694</orcidid><orcidid>https://orcid.org/0000-0002-9775-185X</orcidid><orcidid>https://orcid.org/0000-0001-9894-0313</orcidid></search><sort><creationdate>20200505</creationdate><title>RNA Editing Alters miRNA Function in Chronic Lymphocytic Leukemia</title><author>Gassner, Franz J ; Zaborsky, Nadja ; Feldbacher, Daniel ; Greil, Richard ; Geisberger, Roland</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c393t-4135550cd1416816f4b603776de9d8ebebe278c5c18c7e8bd47280e4db8e8ce33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gassner, Franz J</creatorcontrib><creatorcontrib>Zaborsky, Nadja</creatorcontrib><creatorcontrib>Feldbacher, Daniel</creatorcontrib><creatorcontrib>Greil, Richard</creatorcontrib><creatorcontrib>Geisberger, Roland</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Cancers</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gassner, Franz J</au><au>Zaborsky, Nadja</au><au>Feldbacher, Daniel</au><au>Greil, Richard</au><au>Geisberger, Roland</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>RNA Editing Alters miRNA Function in Chronic Lymphocytic Leukemia</atitle><jtitle>Cancers</jtitle><addtitle>Cancers (Basel)</addtitle><date>2020-05-05</date><risdate>2020</risdate><volume>12</volume><issue>5</issue><spage>1159</spage><pages>1159-</pages><issn>2072-6694</issn><eissn>2072-6694</eissn><abstract>Chronic lymphocytic leukemia (CLL) is a high incidence B cell leukemia with a highly variable clinical course, leading to survival times ranging from months to several decades. MicroRNAs (miRNAs) are small non-coding RNAs that regulate the expression levels of genes by binding to the untranslated regions of transcripts. Although miRNAs have been previously shown to play a crucial role in CLL development, progression and treatment resistance, their further processing and diversification by RNA editing (specifically adenosine to inosine or cytosine to uracil deamination) has not been addressed so far. In this study, we analyzed next generation sequencing data to provide a detailed map of adenosine to inosine and cytosine to uracil changes in miRNAs from CLL and normal B cells. Our results reveal that in addition to a CLL-specific expression pattern, there is also specific RNA editing of many miRNAs, particularly miR-3157 and miR-6503, in CLL. Our data draw further light on how miRNAs and miRNA editing might be implicated in the pathogenesis of the disease.</abstract><cop>Switzerland</cop><pub>MDPI</pub><pmid>32380696</pmid><doi>10.3390/cancers12051159</doi><orcidid>https://orcid.org/0000-0002-0131-2191</orcidid><orcidid>https://orcid.org/0000-0002-4462-3694</orcidid><orcidid>https://orcid.org/0000-0002-9775-185X</orcidid><orcidid>https://orcid.org/0000-0001-9894-0313</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2072-6694
ispartof Cancers, 2020-05, Vol.12 (5), p.1159
issn 2072-6694
2072-6694
language eng
recordid cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7280959
source PubMed Central Open Access; MDPI - Multidisciplinary Digital Publishing Institute; EZB-FREE-00999 freely available EZB journals; PubMed Central
title RNA Editing Alters miRNA Function in Chronic Lymphocytic Leukemia
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-14T13%3A38%3A15IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=RNA%20Editing%20Alters%20miRNA%20Function%20in%20Chronic%20Lymphocytic%20Leukemia&rft.jtitle=Cancers&rft.au=Gassner,%20Franz%20J&rft.date=2020-05-05&rft.volume=12&rft.issue=5&rft.spage=1159&rft.pages=1159-&rft.issn=2072-6694&rft.eissn=2072-6694&rft_id=info:doi/10.3390/cancers12051159&rft_dat=%3Cproquest_pubme%3E2400551005%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2400551005&rft_id=info:pmid/32380696&rfr_iscdi=true