Near-Complete Genome Sequence of an Enterovirus Species F Isolate Recovered from Sewage in Nigeria
Here, we describe the near-complete genome of an enterovirus F (EV-F) isolate from Nigeria. The obtained sequence was 7,378 nucleotides (nt) long and encodes 2 open reading frames (ORFs), an upstream ORF (uORF; 56 amino acids [aa]) and a polyprotein ORF (ppORF; 2,167 aa). Both ORFs overlap but are i...
Gespeichert in:
Veröffentlicht in: | Microbiology resource announcements 2020-05, Vol.9 (22) |
---|---|
Hauptverfasser: | , , , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | |
---|---|
container_issue | 22 |
container_start_page | |
container_title | Microbiology resource announcements |
container_volume | 9 |
creator | Faleye, T O C Ifeorah, M I Olayinka, O A Oluremi, B George, U E Arowolo, O A Omoruyi, E C Donbraye, E Oyero, A O Adewumi, O M Adeniji, J A |
description | Here, we describe the near-complete genome of an enterovirus F (EV-F) isolate from Nigeria. The obtained sequence was 7,378 nucleotides (nt) long and encodes 2 open reading frames (ORFs), an upstream ORF (uORF; 56 amino acids [aa]) and a polyprotein ORF (ppORF; 2,167 aa). Both ORFs overlap but are in different reading frames, with the uORF in a +1 reading frame relative to the ppORF. |
doi_str_mv | 10.1128/MRA.00094-20 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7256247</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2408194894</sourcerecordid><originalsourceid>FETCH-LOGICAL-c341t-a43cf50efe0834e80d64da33bf8e2a463b5cde757b5d7ed2895c440fc58050fd3</originalsourceid><addsrcrecordid>eNpVkU1P3DAQhq2KikWwN86VjxwInfgjcS6V0GqhK1EqQSv1ZjnOeHGVxIudXdR_X7fACk4z0jzzzsdLyGkJF2XJ1Odvd5cXANCIgsEHcsRkXRXQqF8Hb_IZmaf0O1MMhGoqfkhmnImqZhUckfYWTSwWYdj0OCG9xjEMSO_xcYujRRocNSNdjhPGsPNxm-j9Bq3HRK_oKoXe5J47tGGHETvqYhhy75NZI_UjvfVrjN6ckI_O9AnnL_GY_Lxa_lh8LW6-X68WlzeF5aKcCiO4dRLQISguUEFXic5w3jqFzIiKt9J2WMu6lV2NHVONtEKAs1KBBNfxY_LlWXezbQfsLI5TNL3eRD-Y-EcH4_X7yugf9DrsdM1kxUSdBc5eBGLI96dJDz5Z7HszYtgmzQSossk_FBk9f0ZtDClFdPsxJeh_zujsjP7vjGaQ8U9vV9vDrz7wv2umios</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2408194894</pqid></control><display><type>article</type><title>Near-Complete Genome Sequence of an Enterovirus Species F Isolate Recovered from Sewage in Nigeria</title><source>PubMed Central</source><creator>Faleye, T O C ; Ifeorah, M I ; Olayinka, O A ; Oluremi, B ; George, U E ; Arowolo, O A ; Omoruyi, E C ; Donbraye, E ; Oyero, A O ; Adewumi, O M ; Adeniji, J A</creator><creatorcontrib>Faleye, T O C ; Ifeorah, M I ; Olayinka, O A ; Oluremi, B ; George, U E ; Arowolo, O A ; Omoruyi, E C ; Donbraye, E ; Oyero, A O ; Adewumi, O M ; Adeniji, J A</creatorcontrib><description>Here, we describe the near-complete genome of an enterovirus F (EV-F) isolate from Nigeria. The obtained sequence was 7,378 nucleotides (nt) long and encodes 2 open reading frames (ORFs), an upstream ORF (uORF; 56 amino acids [aa]) and a polyprotein ORF (ppORF; 2,167 aa). Both ORFs overlap but are in different reading frames, with the uORF in a +1 reading frame relative to the ppORF.</description><identifier>ISSN: 2576-098X</identifier><identifier>EISSN: 2576-098X</identifier><identifier>DOI: 10.1128/MRA.00094-20</identifier><identifier>PMID: 32467260</identifier><language>eng</language><publisher>United States: American Society for Microbiology</publisher><subject>Genome Sequences</subject><ispartof>Microbiology resource announcements, 2020-05, Vol.9 (22)</ispartof><rights>Copyright © 2020 Faleye et al.</rights><rights>Copyright © 2020 Faleye et al. 2020 Faleye et al.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c341t-a43cf50efe0834e80d64da33bf8e2a463b5cde757b5d7ed2895c440fc58050fd3</cites><orcidid>0000-0002-5172-5808 ; 0000-0001-7706-9493</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7256247/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7256247/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32467260$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Faleye, T O C</creatorcontrib><creatorcontrib>Ifeorah, M I</creatorcontrib><creatorcontrib>Olayinka, O A</creatorcontrib><creatorcontrib>Oluremi, B</creatorcontrib><creatorcontrib>George, U E</creatorcontrib><creatorcontrib>Arowolo, O A</creatorcontrib><creatorcontrib>Omoruyi, E C</creatorcontrib><creatorcontrib>Donbraye, E</creatorcontrib><creatorcontrib>Oyero, A O</creatorcontrib><creatorcontrib>Adewumi, O M</creatorcontrib><creatorcontrib>Adeniji, J A</creatorcontrib><title>Near-Complete Genome Sequence of an Enterovirus Species F Isolate Recovered from Sewage in Nigeria</title><title>Microbiology resource announcements</title><addtitle>Microbiol Resour Announc</addtitle><description>Here, we describe the near-complete genome of an enterovirus F (EV-F) isolate from Nigeria. The obtained sequence was 7,378 nucleotides (nt) long and encodes 2 open reading frames (ORFs), an upstream ORF (uORF; 56 amino acids [aa]) and a polyprotein ORF (ppORF; 2,167 aa). Both ORFs overlap but are in different reading frames, with the uORF in a +1 reading frame relative to the ppORF.</description><subject>Genome Sequences</subject><issn>2576-098X</issn><issn>2576-098X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNpVkU1P3DAQhq2KikWwN86VjxwInfgjcS6V0GqhK1EqQSv1ZjnOeHGVxIudXdR_X7fACk4z0jzzzsdLyGkJF2XJ1Odvd5cXANCIgsEHcsRkXRXQqF8Hb_IZmaf0O1MMhGoqfkhmnImqZhUckfYWTSwWYdj0OCG9xjEMSO_xcYujRRocNSNdjhPGsPNxm-j9Bq3HRK_oKoXe5J47tGGHETvqYhhy75NZI_UjvfVrjN6ckI_O9AnnL_GY_Lxa_lh8LW6-X68WlzeF5aKcCiO4dRLQISguUEFXic5w3jqFzIiKt9J2WMu6lV2NHVONtEKAs1KBBNfxY_LlWXezbQfsLI5TNL3eRD-Y-EcH4_X7yugf9DrsdM1kxUSdBc5eBGLI96dJDz5Z7HszYtgmzQSossk_FBk9f0ZtDClFdPsxJeh_zujsjP7vjGaQ8U9vV9vDrz7wv2umios</recordid><startdate>20200528</startdate><enddate>20200528</enddate><creator>Faleye, T O C</creator><creator>Ifeorah, M I</creator><creator>Olayinka, O A</creator><creator>Oluremi, B</creator><creator>George, U E</creator><creator>Arowolo, O A</creator><creator>Omoruyi, E C</creator><creator>Donbraye, E</creator><creator>Oyero, A O</creator><creator>Adewumi, O M</creator><creator>Adeniji, J A</creator><general>American Society for Microbiology</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-5172-5808</orcidid><orcidid>https://orcid.org/0000-0001-7706-9493</orcidid></search><sort><creationdate>20200528</creationdate><title>Near-Complete Genome Sequence of an Enterovirus Species F Isolate Recovered from Sewage in Nigeria</title><author>Faleye, T O C ; Ifeorah, M I ; Olayinka, O A ; Oluremi, B ; George, U E ; Arowolo, O A ; Omoruyi, E C ; Donbraye, E ; Oyero, A O ; Adewumi, O M ; Adeniji, J A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c341t-a43cf50efe0834e80d64da33bf8e2a463b5cde757b5d7ed2895c440fc58050fd3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Genome Sequences</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Faleye, T O C</creatorcontrib><creatorcontrib>Ifeorah, M I</creatorcontrib><creatorcontrib>Olayinka, O A</creatorcontrib><creatorcontrib>Oluremi, B</creatorcontrib><creatorcontrib>George, U E</creatorcontrib><creatorcontrib>Arowolo, O A</creatorcontrib><creatorcontrib>Omoruyi, E C</creatorcontrib><creatorcontrib>Donbraye, E</creatorcontrib><creatorcontrib>Oyero, A O</creatorcontrib><creatorcontrib>Adewumi, O M</creatorcontrib><creatorcontrib>Adeniji, J A</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Microbiology resource announcements</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Faleye, T O C</au><au>Ifeorah, M I</au><au>Olayinka, O A</au><au>Oluremi, B</au><au>George, U E</au><au>Arowolo, O A</au><au>Omoruyi, E C</au><au>Donbraye, E</au><au>Oyero, A O</au><au>Adewumi, O M</au><au>Adeniji, J A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Near-Complete Genome Sequence of an Enterovirus Species F Isolate Recovered from Sewage in Nigeria</atitle><jtitle>Microbiology resource announcements</jtitle><addtitle>Microbiol Resour Announc</addtitle><date>2020-05-28</date><risdate>2020</risdate><volume>9</volume><issue>22</issue><issn>2576-098X</issn><eissn>2576-098X</eissn><abstract>Here, we describe the near-complete genome of an enterovirus F (EV-F) isolate from Nigeria. The obtained sequence was 7,378 nucleotides (nt) long and encodes 2 open reading frames (ORFs), an upstream ORF (uORF; 56 amino acids [aa]) and a polyprotein ORF (ppORF; 2,167 aa). Both ORFs overlap but are in different reading frames, with the uORF in a +1 reading frame relative to the ppORF.</abstract><cop>United States</cop><pub>American Society for Microbiology</pub><pmid>32467260</pmid><doi>10.1128/MRA.00094-20</doi><orcidid>https://orcid.org/0000-0002-5172-5808</orcidid><orcidid>https://orcid.org/0000-0001-7706-9493</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 2576-098X |
ispartof | Microbiology resource announcements, 2020-05, Vol.9 (22) |
issn | 2576-098X 2576-098X |
language | eng |
recordid | cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_7256247 |
source | PubMed Central |
subjects | Genome Sequences |
title | Near-Complete Genome Sequence of an Enterovirus Species F Isolate Recovered from Sewage in Nigeria |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-10T06%3A35%3A01IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Near-Complete%20Genome%20Sequence%20of%20an%20Enterovirus%20Species%20F%20Isolate%20Recovered%20from%20Sewage%20in%20Nigeria&rft.jtitle=Microbiology%20resource%20announcements&rft.au=Faleye,%20T%20O%20C&rft.date=2020-05-28&rft.volume=9&rft.issue=22&rft.issn=2576-098X&rft.eissn=2576-098X&rft_id=info:doi/10.1128/MRA.00094-20&rft_dat=%3Cproquest_pubme%3E2408194894%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2408194894&rft_id=info:pmid/32467260&rfr_iscdi=true |