Microorganisms Associated With Pneumonia in Children <5 Years of Age in Developing and Emerging Countries: The GABRIEL Pneumonia Multicenter, Prospective, Case-Control Study

Background. Pneumonia, the leading infectious cause of child mortality globally, mainly afflicts developing countries. This prospective observational study aimed to assess the microorganisms associated with pneumonia in children aged

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Veröffentlicht in:Clinical infectious diseases 2017-08, Vol.65 (4), p.604-612
Hauptverfasser: Bénet, Thomas, Picot, Valentina Sánchez, Messaoudi, Mélina, Chou, Monidarin, Eap, Tekchheng, Wang, Jianwei, Shen, Kunling, Pape, Jean-William, Rouzier, Vanessa, Awasthi, Shally, Pandey, Nitin, Bavdekar, Ashish, Sanghavi, Sonali, Robinson, Annick, Rakoto-Andrianarivelo, Mala, Sylla, Maryam, Diallo, Souleymane, Nymadawa, Pagbajabyn, Naranbat, Nymadawaagiin, Russomando, Graciela, Basualdo, Wilma, Komurian-Pradel, Florence, Endtz, Hubert, Vanhems, Philippe, Paranhos-Baccalà, Gláucia
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container_title Clinical infectious diseases
container_volume 65
creator Bénet, Thomas
Picot, Valentina Sánchez
Messaoudi, Mélina
Chou, Monidarin
Eap, Tekchheng
Wang, Jianwei
Shen, Kunling
Pape, Jean-William
Rouzier, Vanessa
Awasthi, Shally
Pandey, Nitin
Bavdekar, Ashish
Sanghavi, Sonali
Robinson, Annick
Rakoto-Andrianarivelo, Mala
Sylla, Maryam
Diallo, Souleymane
Nymadawa, Pagbajabyn
Naranbat, Nymadawaagiin
Russomando, Graciela
Basualdo, Wilma
Komurian-Pradel, Florence
Endtz, Hubert
Vanhems, Philippe
Paranhos-Baccalà, Gláucia
description Background. Pneumonia, the leading infectious cause of child mortality globally, mainly afflicts developing countries. This prospective observational study aimed to assess the microorganisms associated with pneumonia in children aged
doi_str_mv 10.1093/cid/cix378
format Article
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Pneumonia, the leading infectious cause of child mortality globally, mainly afflicts developing countries. This prospective observational study aimed to assess the microorganisms associated with pneumonia in children aged &lt;5 years in developing and emerging countries. Methods. A multicenter, case-control study by the GABRIEL (Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries) network was conducted between 2010 and 2014 in Cambodia, China, Haiti, India (2 sites), Madagascar, Mali, Mongolia, and Paraguay. Cases were hospitalized children with radiologically confirmed pneumonia; controls were children from the same setting without any features suggestive of pneumonia. Nasopharyngeal swabs were collected from all subjects; 19 viruses and 5 bacteria were identified by reverse-transcription polymerase chain reaction. Associations between microorganisms and pneumonia were quantified by calculating the adjusted population attributable fraction (aPAF) after multivariate logistic regression analysis adjusted for sex, age, time period, other pathogens, and site. Results. Overall, 888 cases and 870 controls were analyzed; ≥1 microorganism was detected in respiratory samples in 93.0% of cases and 74.4% of controls (P &lt; .001). Streptococcus pneumoniae, Mycoplasma pneumoniae, human metapneumovirus, rhinovirus, respiratory syncytial virus (RSV), parainfluenza virus 1, 3, and 4, and influenza virus A and B were independently associated with pneumonia; aPAF was 42.2% (95% confidence interval [CI], 35.5%–48.2%) for S. pneumoniae, 18.2% (95% CI, 17.4%–19.0%) for RSV, and 11.2% (95% CI, 7.5%–14.7%) for rhinovirus. Conclusions. Streptococcus pneumoniae, RSV, and rhinovirus may be the major microorganisms associated with pneumonia infections in children &lt;5 years of age from developing and emerging countries. Increasing S. pneumoniae vaccination coverage may substantially reduce the burden of pneumonia among children in developing countries.</description><identifier>ISSN: 1058-4838</identifier><identifier>ISSN: 1537-6591</identifier><identifier>EISSN: 1537-6591</identifier><identifier>DOI: 10.1093/cid/cix378</identifier><identifier>PMID: 28605562</identifier><language>eng</language><publisher>United States: Oxford University Press</publisher><subject>Age ; and Commentaries ; ARTICLES AND COMMENTARIES ; Asia - epidemiology ; Bacteria ; Biological research ; Case-Control Studies ; Child mortality ; Child, Preschool ; Children ; Confidence intervals ; Control methods ; Developing Countries ; Epidemics ; Female ; Haiti - epidemiology ; Humans ; Infant ; Infectious diseases ; Influenza ; LDCs ; Male ; Mali - epidemiology ; Microorganisms ; Parainfluenza ; Pneumonia ; Pneumonia, Bacterial - epidemiology ; Pneumonia, Bacterial - microbiology ; Polymerase chain reaction ; Prospective Studies ; Regression analysis ; Respiratory syncytial virus ; Rhinovirus ; Streptococcus infections ; Streptococcus pneumoniae ; Vaccination ; Viruses</subject><ispartof>Clinical infectious diseases, 2017-08, Vol.65 (4), p.604-612</ispartof><rights>Copyright © 2017 Oxford University Press on behalf of the Infectious Diseases Society of America</rights><rights>The Author 2017. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com.</rights><rights>Copyright Oxford University Press, UK Aug 15, 2017</rights><rights>The Author 2017. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com. 2017</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c456t-d0cb456ff7276843276cb932ca7088b18395964c0267ac30520d6cab2f0db11c3</citedby><cites>FETCH-LOGICAL-c456t-d0cb456ff7276843276cb932ca7088b18395964c0267ac30520d6cab2f0db11c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/26375344$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/26375344$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,776,780,799,881,27903,27904,57996,58229</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28605562$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bénet, Thomas</creatorcontrib><creatorcontrib>Picot, Valentina Sánchez</creatorcontrib><creatorcontrib>Messaoudi, Mélina</creatorcontrib><creatorcontrib>Chou, Monidarin</creatorcontrib><creatorcontrib>Eap, Tekchheng</creatorcontrib><creatorcontrib>Wang, Jianwei</creatorcontrib><creatorcontrib>Shen, Kunling</creatorcontrib><creatorcontrib>Pape, Jean-William</creatorcontrib><creatorcontrib>Rouzier, Vanessa</creatorcontrib><creatorcontrib>Awasthi, Shally</creatorcontrib><creatorcontrib>Pandey, Nitin</creatorcontrib><creatorcontrib>Bavdekar, Ashish</creatorcontrib><creatorcontrib>Sanghavi, Sonali</creatorcontrib><creatorcontrib>Robinson, Annick</creatorcontrib><creatorcontrib>Rakoto-Andrianarivelo, Mala</creatorcontrib><creatorcontrib>Sylla, Maryam</creatorcontrib><creatorcontrib>Diallo, Souleymane</creatorcontrib><creatorcontrib>Nymadawa, Pagbajabyn</creatorcontrib><creatorcontrib>Naranbat, Nymadawaagiin</creatorcontrib><creatorcontrib>Russomando, Graciela</creatorcontrib><creatorcontrib>Basualdo, Wilma</creatorcontrib><creatorcontrib>Komurian-Pradel, Florence</creatorcontrib><creatorcontrib>Endtz, Hubert</creatorcontrib><creatorcontrib>Vanhems, Philippe</creatorcontrib><creatorcontrib>Paranhos-Baccalà, Gláucia</creatorcontrib><creatorcontrib>Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network</creatorcontrib><creatorcontrib>Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network</creatorcontrib><creatorcontrib>for the Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network</creatorcontrib><title>Microorganisms Associated With Pneumonia in Children &lt;5 Years of Age in Developing and Emerging Countries: The GABRIEL Pneumonia Multicenter, Prospective, Case-Control Study</title><title>Clinical infectious diseases</title><addtitle>Clin Infect Dis</addtitle><description>Background. Pneumonia, the leading infectious cause of child mortality globally, mainly afflicts developing countries. This prospective observational study aimed to assess the microorganisms associated with pneumonia in children aged &lt;5 years in developing and emerging countries. Methods. A multicenter, case-control study by the GABRIEL (Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries) network was conducted between 2010 and 2014 in Cambodia, China, Haiti, India (2 sites), Madagascar, Mali, Mongolia, and Paraguay. Cases were hospitalized children with radiologically confirmed pneumonia; controls were children from the same setting without any features suggestive of pneumonia. Nasopharyngeal swabs were collected from all subjects; 19 viruses and 5 bacteria were identified by reverse-transcription polymerase chain reaction. Associations between microorganisms and pneumonia were quantified by calculating the adjusted population attributable fraction (aPAF) after multivariate logistic regression analysis adjusted for sex, age, time period, other pathogens, and site. Results. Overall, 888 cases and 870 controls were analyzed; ≥1 microorganism was detected in respiratory samples in 93.0% of cases and 74.4% of controls (P &lt; .001). Streptococcus pneumoniae, Mycoplasma pneumoniae, human metapneumovirus, rhinovirus, respiratory syncytial virus (RSV), parainfluenza virus 1, 3, and 4, and influenza virus A and B were independently associated with pneumonia; aPAF was 42.2% (95% confidence interval [CI], 35.5%–48.2%) for S. pneumoniae, 18.2% (95% CI, 17.4%–19.0%) for RSV, and 11.2% (95% CI, 7.5%–14.7%) for rhinovirus. Conclusions. Streptococcus pneumoniae, RSV, and rhinovirus may be the major microorganisms associated with pneumonia infections in children &lt;5 years of age from developing and emerging countries. Increasing S. pneumoniae vaccination coverage may substantially reduce the burden of pneumonia among children in developing countries.</description><subject>Age</subject><subject>and Commentaries</subject><subject>ARTICLES AND COMMENTARIES</subject><subject>Asia - epidemiology</subject><subject>Bacteria</subject><subject>Biological research</subject><subject>Case-Control Studies</subject><subject>Child mortality</subject><subject>Child, Preschool</subject><subject>Children</subject><subject>Confidence intervals</subject><subject>Control methods</subject><subject>Developing Countries</subject><subject>Epidemics</subject><subject>Female</subject><subject>Haiti - epidemiology</subject><subject>Humans</subject><subject>Infant</subject><subject>Infectious diseases</subject><subject>Influenza</subject><subject>LDCs</subject><subject>Male</subject><subject>Mali - epidemiology</subject><subject>Microorganisms</subject><subject>Parainfluenza</subject><subject>Pneumonia</subject><subject>Pneumonia, Bacterial - epidemiology</subject><subject>Pneumonia, Bacterial - microbiology</subject><subject>Polymerase chain reaction</subject><subject>Prospective Studies</subject><subject>Regression analysis</subject><subject>Respiratory syncytial virus</subject><subject>Rhinovirus</subject><subject>Streptococcus infections</subject><subject>Streptococcus pneumoniae</subject><subject>Vaccination</subject><subject>Viruses</subject><issn>1058-4838</issn><issn>1537-6591</issn><issn>1537-6591</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkl9rFDEUxQdRbK2--K4EfCnS0fyZTDIihXVca2GLRSvi05DJ3NnNMpOsSWaxH8rvaJattfqQ5Ibzy-GEe7PsKcGvCK7Ya226tH4yIe9lh4QzkZe8IvdTjbnMC8nkQfYohDXGhEjMH2YHVJaY85IeZr8ujPbO-aWyJowBzUJw2qgIHfpm4gpdWphGZ41CxqJ6ZYbOg0VvOfoOygfkejRbwk57D1sY3MbYJVK2Q_MR_HJ3qd1kozcQ3qCrFaCz2bvP5_PFHd-LaYhGg43gT9Cld2EDOpotnKBaBchrl567AX2JU3f9OHvQqyHAk5vzKPv6YX5Vf8wXn87O69ki1wUvY95h3aai7wUVpSxY2nVbMaqVwFK2RLKKV2WhMS2F0gxzirtSq5b2uGsJ0ewoO937bqZ2hG6Xzquh2XgzKn_dOGWafxVrVs3SbRtBsCRYJIPjGwPvfkwQYjOaoGEYlAU3hYZUuKKYE1Il9MV_6NpN3qbvJYoJQQuKi0S93FOpWyF46G_DENzspqBJU9DspyDBz-_Gv0X_tD0Bz_bAOkTn_-olE5wVBfsNsVu5lQ</recordid><startdate>20170815</startdate><enddate>20170815</enddate><creator>Bénet, Thomas</creator><creator>Picot, Valentina Sánchez</creator><creator>Messaoudi, Mélina</creator><creator>Chou, Monidarin</creator><creator>Eap, Tekchheng</creator><creator>Wang, Jianwei</creator><creator>Shen, Kunling</creator><creator>Pape, Jean-William</creator><creator>Rouzier, Vanessa</creator><creator>Awasthi, Shally</creator><creator>Pandey, Nitin</creator><creator>Bavdekar, Ashish</creator><creator>Sanghavi, Sonali</creator><creator>Robinson, Annick</creator><creator>Rakoto-Andrianarivelo, Mala</creator><creator>Sylla, Maryam</creator><creator>Diallo, Souleymane</creator><creator>Nymadawa, Pagbajabyn</creator><creator>Naranbat, Nymadawaagiin</creator><creator>Russomando, Graciela</creator><creator>Basualdo, Wilma</creator><creator>Komurian-Pradel, Florence</creator><creator>Endtz, Hubert</creator><creator>Vanhems, Philippe</creator><creator>Paranhos-Baccalà, Gláucia</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T2</scope><scope>7T7</scope><scope>7U7</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20170815</creationdate><title>Microorganisms Associated With Pneumonia in Children &lt;5 Years of Age in Developing and Emerging Countries: The GABRIEL Pneumonia Multicenter, Prospective, Case-Control Study</title><author>Bénet, Thomas ; Picot, Valentina Sánchez ; Messaoudi, Mélina ; Chou, Monidarin ; Eap, Tekchheng ; Wang, Jianwei ; Shen, Kunling ; Pape, Jean-William ; Rouzier, Vanessa ; Awasthi, Shally ; Pandey, Nitin ; Bavdekar, Ashish ; Sanghavi, Sonali ; Robinson, Annick ; Rakoto-Andrianarivelo, Mala ; Sylla, Maryam ; Diallo, Souleymane ; Nymadawa, Pagbajabyn ; Naranbat, Nymadawaagiin ; Russomando, Graciela ; Basualdo, Wilma ; Komurian-Pradel, Florence ; Endtz, Hubert ; Vanhems, Philippe ; Paranhos-Baccalà, Gláucia</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c456t-d0cb456ff7276843276cb932ca7088b18395964c0267ac30520d6cab2f0db11c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Age</topic><topic>and Commentaries</topic><topic>ARTICLES AND COMMENTARIES</topic><topic>Asia - epidemiology</topic><topic>Bacteria</topic><topic>Biological research</topic><topic>Case-Control Studies</topic><topic>Child mortality</topic><topic>Child, Preschool</topic><topic>Children</topic><topic>Confidence intervals</topic><topic>Control methods</topic><topic>Developing Countries</topic><topic>Epidemics</topic><topic>Female</topic><topic>Haiti - epidemiology</topic><topic>Humans</topic><topic>Infant</topic><topic>Infectious diseases</topic><topic>Influenza</topic><topic>LDCs</topic><topic>Male</topic><topic>Mali - epidemiology</topic><topic>Microorganisms</topic><topic>Parainfluenza</topic><topic>Pneumonia</topic><topic>Pneumonia, Bacterial - epidemiology</topic><topic>Pneumonia, Bacterial - microbiology</topic><topic>Polymerase chain reaction</topic><topic>Prospective Studies</topic><topic>Regression analysis</topic><topic>Respiratory syncytial virus</topic><topic>Rhinovirus</topic><topic>Streptococcus infections</topic><topic>Streptococcus pneumoniae</topic><topic>Vaccination</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bénet, Thomas</creatorcontrib><creatorcontrib>Picot, Valentina Sánchez</creatorcontrib><creatorcontrib>Messaoudi, Mélina</creatorcontrib><creatorcontrib>Chou, Monidarin</creatorcontrib><creatorcontrib>Eap, Tekchheng</creatorcontrib><creatorcontrib>Wang, Jianwei</creatorcontrib><creatorcontrib>Shen, Kunling</creatorcontrib><creatorcontrib>Pape, Jean-William</creatorcontrib><creatorcontrib>Rouzier, Vanessa</creatorcontrib><creatorcontrib>Awasthi, Shally</creatorcontrib><creatorcontrib>Pandey, Nitin</creatorcontrib><creatorcontrib>Bavdekar, Ashish</creatorcontrib><creatorcontrib>Sanghavi, Sonali</creatorcontrib><creatorcontrib>Robinson, Annick</creatorcontrib><creatorcontrib>Rakoto-Andrianarivelo, Mala</creatorcontrib><creatorcontrib>Sylla, Maryam</creatorcontrib><creatorcontrib>Diallo, Souleymane</creatorcontrib><creatorcontrib>Nymadawa, Pagbajabyn</creatorcontrib><creatorcontrib>Naranbat, Nymadawaagiin</creatorcontrib><creatorcontrib>Russomando, Graciela</creatorcontrib><creatorcontrib>Basualdo, Wilma</creatorcontrib><creatorcontrib>Komurian-Pradel, Florence</creatorcontrib><creatorcontrib>Endtz, Hubert</creatorcontrib><creatorcontrib>Vanhems, Philippe</creatorcontrib><creatorcontrib>Paranhos-Baccalà, Gláucia</creatorcontrib><creatorcontrib>Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network</creatorcontrib><creatorcontrib>Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network</creatorcontrib><creatorcontrib>for the Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Health and Safety Science Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Toxicology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Clinical infectious diseases</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bénet, Thomas</au><au>Picot, Valentina Sánchez</au><au>Messaoudi, Mélina</au><au>Chou, Monidarin</au><au>Eap, Tekchheng</au><au>Wang, Jianwei</au><au>Shen, Kunling</au><au>Pape, Jean-William</au><au>Rouzier, Vanessa</au><au>Awasthi, Shally</au><au>Pandey, Nitin</au><au>Bavdekar, Ashish</au><au>Sanghavi, Sonali</au><au>Robinson, Annick</au><au>Rakoto-Andrianarivelo, Mala</au><au>Sylla, Maryam</au><au>Diallo, Souleymane</au><au>Nymadawa, Pagbajabyn</au><au>Naranbat, Nymadawaagiin</au><au>Russomando, Graciela</au><au>Basualdo, Wilma</au><au>Komurian-Pradel, Florence</au><au>Endtz, Hubert</au><au>Vanhems, Philippe</au><au>Paranhos-Baccalà, Gláucia</au><aucorp>Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network</aucorp><aucorp>Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network</aucorp><aucorp>for the Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries (GABRIEL) Network</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Microorganisms Associated With Pneumonia in Children &lt;5 Years of Age in Developing and Emerging Countries: The GABRIEL Pneumonia Multicenter, Prospective, Case-Control Study</atitle><jtitle>Clinical infectious diseases</jtitle><addtitle>Clin Infect Dis</addtitle><date>2017-08-15</date><risdate>2017</risdate><volume>65</volume><issue>4</issue><spage>604</spage><epage>612</epage><pages>604-612</pages><issn>1058-4838</issn><issn>1537-6591</issn><eissn>1537-6591</eissn><abstract>Background. Pneumonia, the leading infectious cause of child mortality globally, mainly afflicts developing countries. This prospective observational study aimed to assess the microorganisms associated with pneumonia in children aged &lt;5 years in developing and emerging countries. Methods. A multicenter, case-control study by the GABRIEL (Global Approach to Biological Research, Infectious diseases and Epidemics in Low-income countries) network was conducted between 2010 and 2014 in Cambodia, China, Haiti, India (2 sites), Madagascar, Mali, Mongolia, and Paraguay. Cases were hospitalized children with radiologically confirmed pneumonia; controls were children from the same setting without any features suggestive of pneumonia. Nasopharyngeal swabs were collected from all subjects; 19 viruses and 5 bacteria were identified by reverse-transcription polymerase chain reaction. Associations between microorganisms and pneumonia were quantified by calculating the adjusted population attributable fraction (aPAF) after multivariate logistic regression analysis adjusted for sex, age, time period, other pathogens, and site. Results. Overall, 888 cases and 870 controls were analyzed; ≥1 microorganism was detected in respiratory samples in 93.0% of cases and 74.4% of controls (P &lt; .001). Streptococcus pneumoniae, Mycoplasma pneumoniae, human metapneumovirus, rhinovirus, respiratory syncytial virus (RSV), parainfluenza virus 1, 3, and 4, and influenza virus A and B were independently associated with pneumonia; aPAF was 42.2% (95% confidence interval [CI], 35.5%–48.2%) for S. pneumoniae, 18.2% (95% CI, 17.4%–19.0%) for RSV, and 11.2% (95% CI, 7.5%–14.7%) for rhinovirus. Conclusions. Streptococcus pneumoniae, RSV, and rhinovirus may be the major microorganisms associated with pneumonia infections in children &lt;5 years of age from developing and emerging countries. Increasing S. pneumoniae vaccination coverage may substantially reduce the burden of pneumonia among children in developing countries.</abstract><cop>United States</cop><pub>Oxford University Press</pub><pmid>28605562</pmid><doi>10.1093/cid/cix378</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
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subjects Age
and Commentaries
ARTICLES AND COMMENTARIES
Asia - epidemiology
Bacteria
Biological research
Case-Control Studies
Child mortality
Child, Preschool
Children
Confidence intervals
Control methods
Developing Countries
Epidemics
Female
Haiti - epidemiology
Humans
Infant
Infectious diseases
Influenza
LDCs
Male
Mali - epidemiology
Microorganisms
Parainfluenza
Pneumonia
Pneumonia, Bacterial - epidemiology
Pneumonia, Bacterial - microbiology
Polymerase chain reaction
Prospective Studies
Regression analysis
Respiratory syncytial virus
Rhinovirus
Streptococcus infections
Streptococcus pneumoniae
Vaccination
Viruses
title Microorganisms Associated With Pneumonia in Children <5 Years of Age in Developing and Emerging Countries: The GABRIEL Pneumonia Multicenter, Prospective, Case-Control Study
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